Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17810 and CA264_17815 are separated by 334 nucleotides CA264_17815 and CA264_17820 are separated by 13 nucleotides
CA264_17810: CA264_17810 - hypothetical protein, at 4,139,348 to 4,141,834
_17810
CA264_17815: CA264_17815 - hypothetical protein, at 4,142,169 to 4,143,347
_17815
CA264_17820: CA264_17820 - amino acid dehydrogenase, at 4,143,361 to 4,144,593
_17820
Position (kb)
4142
4143
4144 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4141.267 kb on - strand, within CA264_17810 at 4141.360 kb on + strand, within CA264_17810 at 4141.360 kb on + strand, within CA264_17810 at 4141.459 kb on + strand, within CA264_17810 at 4141.460 kb on - strand, within CA264_17810 at 4141.462 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.636 kb on + strand at 4141.636 kb on + strand at 4141.636 kb on + strand at 4141.637 kb on - strand at 4141.637 kb on - strand at 4141.637 kb on - strand at 4141.833 kb on - strand at 4141.833 kb on - strand at 4141.879 kb on + strand at 4141.979 kb on + strand at 4141.979 kb on + strand at 4141.979 kb on + strand at 4141.987 kb on + strand at 4142.032 kb on - strand at 4142.080 kb on + strand at 4142.080 kb on + strand at 4142.114 kb on + strand at 4142.120 kb on + strand at 4142.161 kb on - strand at 4142.170 kb on + strand at 4142.222 kb on + strand at 4142.222 kb on + strand at 4142.222 kb on + strand at 4142.223 kb on - strand at 4142.223 kb on - strand at 4142.245 kb on + strand at 4142.245 kb on + strand at 4142.298 kb on + strand, within CA264_17815 at 4142.325 kb on - strand, within CA264_17815 at 4142.365 kb on + strand, within CA264_17815 at 4142.366 kb on - strand, within CA264_17815 at 4142.449 kb on - strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.453 kb on - strand, within CA264_17815 at 4142.460 kb on + strand, within CA264_17815 at 4142.472 kb on - strand, within CA264_17815 at 4142.503 kb on + strand, within CA264_17815 at 4142.504 kb on - strand, within CA264_17815 at 4143.074 kb on - strand, within CA264_17815 at 4143.135 kb on + strand, within CA264_17815 at 4143.136 kb on - strand, within CA264_17815 at 4143.240 kb on - strand at 4143.275 kb on - strand at 4143.348 kb on - strand at 4143.348 kb on - strand at 4143.362 kb on + strand at 4143.468 kb on + strand at 4143.481 kb on - strand at 4143.760 kb on + strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.887 kb on - strand, within CA264_17820 at 4143.891 kb on + strand, within CA264_17820 at 4143.961 kb on + strand, within CA264_17820 at 4144.065 kb on + strand, within CA264_17820 at 4144.304 kb on + strand, within CA264_17820
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,141,267 - CA264_17810 0.77 +0.4 4,141,360 + CA264_17810 0.81 -0.8 4,141,360 + CA264_17810 0.81 -0.1 4,141,459 + CA264_17810 0.85 -1.9 4,141,460 - CA264_17810 0.85 +1.0 4,141,462 - CA264_17810 0.85 +0.2 4,141,548 - CA264_17810 0.88 +0.9 4,141,548 - CA264_17810 0.88 -0.7 4,141,548 - CA264_17810 0.88 -0.1 4,141,548 - CA264_17810 0.88 -0.1 4,141,636 + -0.9 4,141,636 + +0.2 4,141,636 + +0.4 4,141,637 - -0.2 4,141,637 - -0.1 4,141,637 - +0.2 4,141,833 - +0.9 4,141,833 - +0.4 4,141,879 + -0.4 4,141,979 + -0.3 4,141,979 + -0.3 4,141,979 + -0.0 4,141,987 + -0.6 4,142,032 - -0.2 4,142,080 + +0.2 4,142,080 + -0.4 4,142,114 + -0.2 4,142,120 + +0.0 4,142,161 - -0.2 4,142,170 + +0.2 4,142,222 + +0.6 4,142,222 + -0.3 4,142,222 + -0.7 4,142,223 - +0.5 4,142,223 - +0.7 4,142,245 + -0.2 4,142,245 + -1.4 4,142,298 + CA264_17815 0.11 -0.7 4,142,325 - CA264_17815 0.13 +0.6 4,142,365 + CA264_17815 0.17 -0.2 4,142,366 - CA264_17815 0.17 -0.5 4,142,449 - CA264_17815 0.24 +0.0 4,142,452 + CA264_17815 0.24 -1.0 4,142,452 + CA264_17815 0.24 -0.2 4,142,453 - CA264_17815 0.24 -0.8 4,142,460 + CA264_17815 0.25 -0.0 4,142,472 - CA264_17815 0.26 -0.1 4,142,503 + CA264_17815 0.28 -0.8 4,142,504 - CA264_17815 0.28 -0.3 4,143,074 - CA264_17815 0.77 +0.2 4,143,135 + CA264_17815 0.82 -1.8 4,143,136 - CA264_17815 0.82 -0.8 4,143,240 - -0.5 4,143,275 - -0.5 4,143,348 - -0.6 4,143,348 - -2.3 4,143,362 + -2.0 4,143,468 + -1.0 4,143,481 - -0.3 4,143,760 + CA264_17820 0.32 -1.7 4,143,887 - CA264_17820 0.43 +0.4 4,143,887 - CA264_17820 0.43 -0.1 4,143,891 + CA264_17820 0.43 -1.9 4,143,961 + CA264_17820 0.49 -1.4 4,144,065 + CA264_17820 0.57 -3.7 4,144,304 + CA264_17820 0.76 -2.4
Or see this region's nucleotide sequence