Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17475 and CA264_17480 are separated by 134 nucleotides CA264_17480 and CA264_17485 are separated by 118 nucleotides CA264_17485 and CA264_17490 are separated by 158 nucleotides
CA264_17475: CA264_17475 - DNA replication and repair protein RecF, at 4,072,342 to 4,073,454
_17475
CA264_17480: CA264_17480 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 4,073,589 to 4,074,635
_17480
CA264_17485: CA264_17485 - cytochrome C biosynthesis protein, at 4,074,754 to 4,075,473
_17485
CA264_17490: CA264_17490 - 6,7-dimethyl-8-ribityllumazine synthase, at 4,075,632 to 4,076,108
_17490
Position (kb)
4073
4074
4075 Strain fitness (log2 ratio)
-2
-1
0
1 at 4072.610 kb on + strand, within CA264_17475 at 4072.778 kb on + strand, within CA264_17475 at 4072.789 kb on + strand, within CA264_17475 at 4072.820 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.988 kb on + strand, within CA264_17475 at 4072.989 kb on - strand, within CA264_17475 at 4073.201 kb on - strand, within CA264_17475 at 4073.321 kb on + strand, within CA264_17475 at 4073.383 kb on - strand at 4073.414 kb on + strand at 4073.439 kb on + strand at 4073.464 kb on - strand at 4073.496 kb on + strand at 4073.514 kb on + strand at 4073.516 kb on + strand at 4073.552 kb on - strand at 4073.554 kb on - strand at 4073.582 kb on - strand at 4074.061 kb on + strand, within CA264_17480 at 4074.694 kb on + strand at 4074.707 kb on + strand at 4074.707 kb on + strand at 4074.724 kb on + strand at 4074.743 kb on + strand at 4074.743 kb on + strand at 4074.749 kb on + strand at 4075.390 kb on + strand, within CA264_17485 at 4075.427 kb on - strand at 4075.427 kb on - strand at 4075.429 kb on - strand at 4075.472 kb on - strand at 4075.493 kb on + strand at 4075.494 kb on - strand at 4075.494 kb on - strand at 4075.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,072,610 + CA264_17475 0.24 -0.7 4,072,778 + CA264_17475 0.39 -0.8 4,072,789 + CA264_17475 0.40 -0.1 4,072,820 + CA264_17475 0.43 -2.3 4,072,988 + CA264_17475 0.58 -0.9 4,072,988 + CA264_17475 0.58 -2.0 4,072,988 + CA264_17475 0.58 -0.6 4,072,989 - CA264_17475 0.58 -1.4 4,073,201 - CA264_17475 0.77 -1.8 4,073,321 + CA264_17475 0.88 -0.2 4,073,383 - -1.8 4,073,414 + -1.2 4,073,439 + -0.6 4,073,464 - -1.9 4,073,496 + +0.7 4,073,514 + -0.7 4,073,516 + -0.9 4,073,552 - -1.2 4,073,554 - -0.9 4,073,582 - +1.2 4,074,061 + CA264_17480 0.45 +0.3 4,074,694 + -2.0 4,074,707 + -0.2 4,074,707 + -0.7 4,074,724 + -0.5 4,074,743 + +0.3 4,074,743 + +0.2 4,074,749 + -1.3 4,075,390 + CA264_17485 0.88 -0.6 4,075,427 - -1.0 4,075,427 - +0.5 4,075,429 - -1.5 4,075,472 - +1.6 4,075,493 + -0.6 4,075,494 - -0.4 4,075,494 - +0.0 4,075,578 - +0.0
Or see this region's nucleotide sequence