Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17330 and CA264_17335 are separated by 415 nucleotides CA264_17335 and CA264_17340 are separated by 246 nucleotides
CA264_17330: CA264_17330 - lipoprotein signal peptidase, at 4,039,781 to 4,040,404
_17330
CA264_17335: CA264_17335 - HAD family hydrolase, at 4,040,820 to 4,041,425
_17335
CA264_17340: CA264_17340 - hypothetical protein, at 4,041,672 to 4,042,439
_17340
Position (kb)
4040
4041
4042 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.427 kb on - strand at 4040.490 kb on + strand at 4040.523 kb on + strand at 4040.532 kb on - strand at 4040.560 kb on + strand at 4040.560 kb on + strand at 4040.573 kb on - strand at 4040.573 kb on - strand at 4040.575 kb on - strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.615 kb on - strand at 4040.741 kb on + strand at 4040.744 kb on - strand at 4041.109 kb on + strand, within CA264_17335 at 4041.113 kb on + strand, within CA264_17335 at 4041.114 kb on - strand, within CA264_17335 at 4041.159 kb on - strand, within CA264_17335 at 4041.200 kb on - strand, within CA264_17335 at 4041.209 kb on + strand, within CA264_17335 at 4041.210 kb on - strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.247 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.419 kb on + strand at 4041.419 kb on + strand at 4041.438 kb on + strand at 4041.439 kb on - strand at 4041.503 kb on + strand at 4041.504 kb on - strand at 4041.549 kb on - strand at 4041.572 kb on - strand at 4041.572 kb on - strand at 4041.611 kb on - strand at 4041.619 kb on - strand at 4041.619 kb on - strand at 4041.628 kb on + strand at 4041.628 kb on + strand at 4041.628 kb on + strand at 4041.629 kb on - strand at 4041.629 kb on - strand at 4041.629 kb on - strand at 4041.633 kb on - strand at 4041.671 kb on - strand at 4041.680 kb on - strand at 4041.816 kb on + strand, within CA264_17340 at 4041.816 kb on + strand, within CA264_17340 at 4041.817 kb on - strand, within CA264_17340 at 4041.817 kb on - strand, within CA264_17340 at 4041.820 kb on + strand, within CA264_17340 at 4041.820 kb on + strand, within CA264_17340 at 4041.821 kb on - strand, within CA264_17340 at 4041.821 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.834 kb on - strand, within CA264_17340 at 4041.852 kb on + strand, within CA264_17340 at 4041.853 kb on - strand, within CA264_17340 at 4041.869 kb on + strand, within CA264_17340 at 4041.872 kb on + strand, within CA264_17340 at 4041.872 kb on + strand, within CA264_17340 at 4041.873 kb on - strand, within CA264_17340 at 4041.884 kb on - strand, within CA264_17340 at 4041.942 kb on + strand, within CA264_17340 at 4041.942 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.945 kb on + strand, within CA264_17340 at 4041.946 kb on - strand, within CA264_17340 at 4041.946 kb on - strand, within CA264_17340 at 4041.948 kb on - strand, within CA264_17340 at 4041.970 kb on + strand, within CA264_17340 at 4041.971 kb on - strand, within CA264_17340 at 4041.980 kb on - strand, within CA264_17340 at 4042.014 kb on + strand, within CA264_17340 at 4042.015 kb on - strand, within CA264_17340 at 4042.153 kb on - strand, within CA264_17340 at 4042.153 kb on - strand, within CA264_17340 at 4042.181 kb on + strand, within CA264_17340 at 4042.202 kb on - strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.209 kb on + strand, within CA264_17340 at 4042.211 kb on + strand, within CA264_17340 at 4042.211 kb on + strand, within CA264_17340 at 4042.212 kb on - strand, within CA264_17340 at 4042.215 kb on + strand, within CA264_17340 at 4042.215 kb on + strand, within CA264_17340 at 4042.216 kb on - strand, within CA264_17340 at 4042.255 kb on + strand, within CA264_17340 at 4042.256 kb on - strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.279 kb on + strand, within CA264_17340 at 4042.280 kb on - strand, within CA264_17340 at 4042.281 kb on + strand, within CA264_17340 at 4042.286 kb on + strand, within CA264_17340 at 4042.286 kb on + strand, within CA264_17340 at 4042.287 kb on - strand, within CA264_17340 at 4042.350 kb on + strand, within CA264_17340 at 4042.350 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.354 kb on + strand, within CA264_17340 at 4042.355 kb on - strand, within CA264_17340 at 4042.355 kb on - strand, within CA264_17340 at 4042.365 kb on + strand at 4042.365 kb on + strand at 4042.366 kb on - strand at 4042.366 kb on - strand at 4042.390 kb on + strand at 4042.390 kb on + strand at 4042.390 kb on + strand at 4042.393 kb on - strand at 4042.393 kb on - strand at 4042.399 kb on - strand at 4042.406 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,040,410 + -1.1 4,040,410 + -0.4 4,040,410 + -0.3 4,040,427 - -2.1 4,040,490 + -0.0 4,040,523 + -0.9 4,040,532 - -0.0 4,040,560 + +0.1 4,040,560 + +0.9 4,040,573 - -0.1 4,040,573 - +0.1 4,040,575 - +0.9 4,040,614 + +1.7 4,040,614 + -0.1 4,040,614 + +0.1 4,040,615 - +1.9 4,040,741 + +1.0 4,040,744 - -1.5 4,041,109 + CA264_17335 0.48 +0.1 4,041,113 + CA264_17335 0.48 +0.3 4,041,114 - CA264_17335 0.49 +0.1 4,041,159 - CA264_17335 0.56 -0.6 4,041,200 - CA264_17335 0.63 -0.0 4,041,209 + CA264_17335 0.64 -1.3 4,041,210 - CA264_17335 0.64 +0.2 4,041,246 + CA264_17335 0.70 -3.0 4,041,246 + CA264_17335 0.70 +0.9 4,041,247 - CA264_17335 0.70 -0.2 4,041,326 - CA264_17335 0.83 -0.4 4,041,326 - CA264_17335 0.83 -1.6 4,041,328 - CA264_17335 0.84 -0.2 4,041,328 - CA264_17335 0.84 -0.5 4,041,328 - CA264_17335 0.84 +0.4 4,041,419 + -0.4 4,041,419 + +1.2 4,041,438 + +0.5 4,041,439 - +2.8 4,041,503 + -0.1 4,041,504 - -0.2 4,041,549 - -0.7 4,041,572 - -0.6 4,041,572 - -1.2 4,041,611 - -0.0 4,041,619 - -0.4 4,041,619 - -0.4 4,041,628 + -0.2 4,041,628 + +0.3 4,041,628 + -0.1 4,041,629 - +0.1 4,041,629 - +0.9 4,041,629 - -0.2 4,041,633 - +0.1 4,041,671 - -0.3 4,041,680 - -0.0 4,041,816 + CA264_17340 0.19 -2.0 4,041,816 + CA264_17340 0.19 +0.1 4,041,817 - CA264_17340 0.19 -0.4 4,041,817 - CA264_17340 0.19 -0.0 4,041,820 + CA264_17340 0.19 -0.2 4,041,820 + CA264_17340 0.19 +0.2 4,041,821 - CA264_17340 0.19 -0.4 4,041,821 - CA264_17340 0.19 +0.0 4,041,834 - CA264_17340 0.21 -0.7 4,041,834 - CA264_17340 0.21 +0.1 4,041,834 - CA264_17340 0.21 -1.1 4,041,852 + CA264_17340 0.23 +2.1 4,041,853 - CA264_17340 0.24 -0.2 4,041,869 + CA264_17340 0.26 +0.2 4,041,872 + CA264_17340 0.26 +0.4 4,041,872 + CA264_17340 0.26 -0.3 4,041,873 - CA264_17340 0.26 -0.7 4,041,884 - CA264_17340 0.28 +0.5 4,041,942 + CA264_17340 0.35 +0.4 4,041,942 + CA264_17340 0.35 -0.2 4,041,945 + CA264_17340 0.36 -1.8 4,041,945 + CA264_17340 0.36 +1.5 4,041,945 + CA264_17340 0.36 +0.5 4,041,946 - CA264_17340 0.36 +0.2 4,041,946 - CA264_17340 0.36 -0.7 4,041,948 - CA264_17340 0.36 +0.5 4,041,970 + CA264_17340 0.39 +1.3 4,041,971 - CA264_17340 0.39 +0.4 4,041,980 - CA264_17340 0.40 -0.6 4,042,014 + CA264_17340 0.45 +1.0 4,042,015 - CA264_17340 0.45 -0.1 4,042,153 - CA264_17340 0.63 -0.3 4,042,153 - CA264_17340 0.63 -1.3 4,042,181 + CA264_17340 0.66 +0.7 4,042,202 - CA264_17340 0.69 +0.4 4,042,209 + CA264_17340 0.70 -0.2 4,042,209 + CA264_17340 0.70 +0.1 4,042,209 + CA264_17340 0.70 +0.3 4,042,209 + CA264_17340 0.70 +0.3 4,042,211 + CA264_17340 0.70 +1.1 4,042,211 + CA264_17340 0.70 +0.3 4,042,212 - CA264_17340 0.70 -0.7 4,042,215 + CA264_17340 0.71 -0.4 4,042,215 + CA264_17340 0.71 +0.5 4,042,216 - CA264_17340 0.71 -0.2 4,042,255 + CA264_17340 0.76 -0.6 4,042,256 - CA264_17340 0.76 +0.3 4,042,279 + CA264_17340 0.79 +1.2 4,042,279 + CA264_17340 0.79 +0.8 4,042,279 + CA264_17340 0.79 +0.2 4,042,279 + CA264_17340 0.79 +0.9 4,042,280 - CA264_17340 0.79 -0.1 4,042,281 + CA264_17340 0.79 +0.5 4,042,286 + CA264_17340 0.80 +0.2 4,042,286 + CA264_17340 0.80 +0.4 4,042,287 - CA264_17340 0.80 +1.6 4,042,350 + CA264_17340 0.88 +0.7 4,042,350 + CA264_17340 0.88 +0.4 4,042,354 + CA264_17340 0.89 +0.2 4,042,354 + CA264_17340 0.89 -0.2 4,042,354 + CA264_17340 0.89 -0.8 4,042,354 + CA264_17340 0.89 +0.6 4,042,355 - CA264_17340 0.89 +0.2 4,042,355 - CA264_17340 0.89 -0.4 4,042,365 + +1.3 4,042,365 + -2.5 4,042,366 - +0.0 4,042,366 - -0.0 4,042,390 + +1.3 4,042,390 + +0.1 4,042,390 + +0.2 4,042,393 - +0.5 4,042,393 - +0.5 4,042,399 - -2.2 4,042,406 + +0.8
Or see this region's nucleotide sequence