Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17245 and CA264_17250 are separated by 135 nucleotides CA264_17250 and CA264_17255 are separated by 155 nucleotides CA264_17255 and CA264_17260 are separated by 86 nucleotides CA264_17260 and CA264_17265 are separated by 158 nucleotides
CA264_17245: CA264_17245 - malate:quinone oxidoreductase, at 4,011,411 to 4,012,925
_17245
CA264_17250: CA264_17250 - competence protein, at 4,013,061 to 4,013,687
_17250
CA264_17255: CA264_17255 - carboxymuconolactone decarboxylase family protein, at 4,013,843 to 4,014,196
_17255
CA264_17260: CA264_17260 - hypothetical protein, at 4,014,283 to 4,014,645
_17260
CA264_17265: CA264_17265 - exodeoxyribonuclease III, at 4,014,804 to 4,015,565
_17265
Position (kb)
4013
4014
4015 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4012.926 kb on - strand at 4012.928 kb on + strand at 4012.928 kb on + strand at 4012.929 kb on - strand at 4012.929 kb on - strand at 4012.942 kb on + strand at 4012.979 kb on - strand at 4013.007 kb on - strand at 4013.062 kb on + strand at 4013.089 kb on - strand at 4013.356 kb on + strand, within CA264_17250 at 4013.356 kb on + strand, within CA264_17250 at 4013.422 kb on + strand, within CA264_17250 at 4013.491 kb on + strand, within CA264_17250 at 4013.491 kb on + strand, within CA264_17250 at 4013.492 kb on - strand, within CA264_17250 at 4013.534 kb on + strand, within CA264_17250 at 4013.535 kb on - strand, within CA264_17250 at 4013.546 kb on - strand, within CA264_17250 at 4013.646 kb on + strand at 4013.647 kb on - strand at 4013.668 kb on + strand at 4013.669 kb on - strand at 4013.669 kb on - strand at 4013.669 kb on - strand at 4013.766 kb on + strand at 4013.767 kb on - strand at 4013.772 kb on - strand at 4013.772 kb on - strand at 4013.796 kb on + strand at 4013.798 kb on + strand at 4013.798 kb on + strand at 4013.834 kb on + strand at 4013.835 kb on - strand at 4013.838 kb on + strand at 4013.838 kb on + strand at 4013.839 kb on - strand at 4013.850 kb on + strand at 4013.851 kb on - strand at 4013.853 kb on + strand at 4013.854 kb on - strand at 4013.870 kb on + strand at 4013.896 kb on + strand, within CA264_17255 at 4013.896 kb on + strand, within CA264_17255 at 4013.896 kb on + strand, within CA264_17255 at 4013.897 kb on - strand, within CA264_17255 at 4013.933 kb on - strand, within CA264_17255 at 4013.951 kb on + strand, within CA264_17255 at 4013.951 kb on + strand, within CA264_17255 at 4013.952 kb on - strand, within CA264_17255 at 4013.973 kb on + strand, within CA264_17255 at 4013.974 kb on - strand, within CA264_17255 at 4014.007 kb on + strand, within CA264_17255 at 4014.008 kb on - strand, within CA264_17255 at 4014.039 kb on - strand, within CA264_17255 at 4014.153 kb on + strand, within CA264_17255 at 4014.154 kb on - strand, within CA264_17255 at 4014.194 kb on + strand at 4014.271 kb on - strand at 4014.271 kb on - strand at 4014.286 kb on + strand at 4014.596 kb on + strand, within CA264_17260 at 4014.674 kb on - strand at 4014.675 kb on + strand at 4014.680 kb on + strand at 4014.705 kb on - strand at 4014.707 kb on - strand at 4014.707 kb on - strand at 4014.732 kb on - strand at 4014.732 kb on - strand at 4014.765 kb on - strand at 4014.778 kb on + strand at 4014.786 kb on - strand at 4014.794 kb on - strand at 4014.794 kb on - strand at 4014.795 kb on + strand at 4014.796 kb on - strand at 4014.796 kb on - strand at 4014.796 kb on - strand at 4014.796 kb on - strand at 4014.796 kb on - strand at 4014.796 kb on - strand at 4014.797 kb on + strand at 4014.815 kb on + strand at 4014.815 kb on + strand at 4014.815 kb on + strand at 4014.816 kb on - strand at 4014.816 kb on - strand at 4014.819 kb on + strand at 4014.819 kb on + strand at 4014.910 kb on + strand, within CA264_17265 at 4014.967 kb on + strand, within CA264_17265 at 4014.967 kb on + strand, within CA264_17265 at 4014.967 kb on + strand, within CA264_17265 at 4014.968 kb on - strand, within CA264_17265 at 4014.968 kb on - strand, within CA264_17265 at 4014.968 kb on - strand at 4014.968 kb on - strand, within CA264_17265 at 4014.968 kb on - strand, within CA264_17265 at 4014.968 kb on - strand, within CA264_17265 at 4014.969 kb on + strand, within CA264_17265 at 4014.969 kb on + strand, within CA264_17265 at 4014.970 kb on - strand, within CA264_17265 at 4014.970 kb on - strand, within CA264_17265 at 4014.985 kb on + strand, within CA264_17265 at 4014.996 kb on + strand, within CA264_17265 at 4014.997 kb on - strand, within CA264_17265 at 4014.997 kb on - strand, within CA264_17265 at 4015.065 kb on + strand, within CA264_17265 at 4015.065 kb on + strand, within CA264_17265 at 4015.065 kb on + strand, within CA264_17265 at 4015.065 kb on + strand, within CA264_17265 at 4015.066 kb on - strand, within CA264_17265 at 4015.125 kb on + strand, within CA264_17265 at 4015.125 kb on + strand, within CA264_17265 at 4015.126 kb on - strand, within CA264_17265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,012,926 - -0.1 4,012,928 + -1.9 4,012,928 + +1.1 4,012,929 - +0.5 4,012,929 - +0.4 4,012,942 + -1.4 4,012,979 - -1.7 4,013,007 - -2.5 4,013,062 + -0.5 4,013,089 - -1.8 4,013,356 + CA264_17250 0.47 -1.0 4,013,356 + CA264_17250 0.47 -2.7 4,013,422 + CA264_17250 0.58 -2.7 4,013,491 + CA264_17250 0.69 -2.2 4,013,491 + CA264_17250 0.69 -1.4 4,013,492 - CA264_17250 0.69 -3.1 4,013,534 + CA264_17250 0.75 +1.1 4,013,535 - CA264_17250 0.76 -1.8 4,013,546 - CA264_17250 0.77 -1.8 4,013,646 + -2.0 4,013,647 - -1.6 4,013,668 + -2.1 4,013,669 - -0.1 4,013,669 - -2.1 4,013,669 - -2.9 4,013,766 + -0.1 4,013,767 - -2.1 4,013,772 - -2.3 4,013,772 - -0.4 4,013,796 + -2.1 4,013,798 + -0.6 4,013,798 + -1.6 4,013,834 + -0.6 4,013,835 - +0.0 4,013,838 + -1.3 4,013,838 + -1.2 4,013,839 - -0.8 4,013,850 + -2.0 4,013,851 - -0.5 4,013,853 + -0.7 4,013,854 - -1.8 4,013,870 + -1.0 4,013,896 + CA264_17255 0.15 -0.6 4,013,896 + CA264_17255 0.15 -0.3 4,013,896 + CA264_17255 0.15 -1.5 4,013,897 - CA264_17255 0.15 -2.9 4,013,933 - CA264_17255 0.25 -1.9 4,013,951 + CA264_17255 0.31 -1.7 4,013,951 + CA264_17255 0.31 -1.5 4,013,952 - CA264_17255 0.31 -1.5 4,013,973 + CA264_17255 0.37 -1.4 4,013,974 - CA264_17255 0.37 -1.6 4,014,007 + CA264_17255 0.46 -1.4 4,014,008 - CA264_17255 0.47 -2.3 4,014,039 - CA264_17255 0.55 -2.9 4,014,153 + CA264_17255 0.88 -1.9 4,014,154 - CA264_17255 0.88 -1.5 4,014,194 + -0.3 4,014,271 - -0.8 4,014,271 - -1.0 4,014,286 + -0.9 4,014,596 + CA264_17260 0.86 -0.6 4,014,674 - -3.9 4,014,675 + -1.8 4,014,680 + -1.3 4,014,705 - -1.1 4,014,707 - -1.8 4,014,707 - -1.2 4,014,732 - -2.1 4,014,732 - -1.8 4,014,765 - -2.4 4,014,778 + -1.6 4,014,786 - -0.8 4,014,794 - -2.6 4,014,794 - -0.3 4,014,795 + +0.9 4,014,796 - +0.9 4,014,796 - -1.0 4,014,796 - -0.5 4,014,796 - -1.9 4,014,796 - -0.8 4,014,796 - -1.2 4,014,797 + -1.0 4,014,815 + -1.9 4,014,815 + -2.7 4,014,815 + -1.2 4,014,816 - -0.8 4,014,816 - -1.6 4,014,819 + -0.9 4,014,819 + -0.7 4,014,910 + CA264_17265 0.14 -2.9 4,014,967 + CA264_17265 0.21 -0.9 4,014,967 + CA264_17265 0.21 -1.5 4,014,967 + CA264_17265 0.21 -1.7 4,014,968 - CA264_17265 0.22 -1.5 4,014,968 - CA264_17265 0.22 -2.5 4,014,968 - +1.5 4,014,968 - CA264_17265 0.22 -0.2 4,014,968 - CA264_17265 0.22 -2.4 4,014,968 - CA264_17265 0.22 -0.9 4,014,969 + CA264_17265 0.22 -2.4 4,014,969 + CA264_17265 0.22 -0.5 4,014,970 - CA264_17265 0.22 -2.4 4,014,970 - CA264_17265 0.22 -1.8 4,014,985 + CA264_17265 0.24 -0.8 4,014,996 + CA264_17265 0.25 -0.1 4,014,997 - CA264_17265 0.25 -0.2 4,014,997 - CA264_17265 0.25 -1.1 4,015,065 + CA264_17265 0.34 -0.0 4,015,065 + CA264_17265 0.34 -2.0 4,015,065 + CA264_17265 0.34 -1.2 4,015,065 + CA264_17265 0.34 -1.1 4,015,066 - CA264_17265 0.34 -1.7 4,015,125 + CA264_17265 0.42 -1.1 4,015,125 + CA264_17265 0.42 -1.8 4,015,126 - CA264_17265 0.42 -0.7
Or see this region's nucleotide sequence