Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17000 and CA264_17005 are separated by 68 nucleotides CA264_17005 and CA264_17010 are separated by 303 nucleotides CA264_17010 and CA264_17015 are separated by 174 nucleotides
CA264_17000: CA264_17000 - phytoene dehydrogenase, at 3,954,694 to 3,956,196
_17000
CA264_17005: CA264_17005 - hypothetical protein, at 3,956,265 to 3,956,705
_17005
CA264_17010: CA264_17010 - helicase SNF2, at 3,957,009 to 3,959,945
_17010
CA264_17015: CA264_17015 - ABC transporter permease, at 3,960,120 to 3,961,343
_17015
Position (kb)
3957
3958
3959
3960 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3956.202 kb on - strand at 3956.205 kb on - strand at 3956.207 kb on - strand at 3956.215 kb on - strand at 3956.241 kb on - strand at 3956.243 kb on + strand at 3956.266 kb on + strand at 3956.347 kb on - strand, within CA264_17005 at 3956.368 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.372 kb on + strand, within CA264_17005 at 3956.373 kb on - strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.375 kb on + strand, within CA264_17005 at 3956.469 kb on + strand, within CA264_17005 at 3956.476 kb on + strand, within CA264_17005 at 3956.493 kb on + strand, within CA264_17005 at 3956.628 kb on - strand, within CA264_17005 at 3956.683 kb on + strand at 3956.710 kb on + strand at 3956.711 kb on - strand at 3956.711 kb on - strand at 3956.712 kb on + strand at 3956.713 kb on - strand at 3956.748 kb on + strand at 3956.753 kb on + strand at 3956.756 kb on - strand at 3956.805 kb on + strand at 3956.983 kb on + strand at 3957.117 kb on + strand at 3957.118 kb on - strand at 3957.129 kb on + strand at 3957.130 kb on - strand at 3957.155 kb on - strand at 3957.162 kb on + strand at 3957.242 kb on + strand at 3957.242 kb on + strand at 3957.942 kb on + strand, within CA264_17010 at 3957.942 kb on + strand, within CA264_17010 at 3957.943 kb on - strand, within CA264_17010 at 3957.943 kb on - strand, within CA264_17010 at 3958.005 kb on - strand, within CA264_17010 at 3958.028 kb on + strand, within CA264_17010 at 3958.029 kb on + strand, within CA264_17010 at 3958.042 kb on + strand, within CA264_17010 at 3958.043 kb on - strand, within CA264_17010 at 3958.105 kb on + strand, within CA264_17010 at 3958.204 kb on + strand, within CA264_17010 at 3958.204 kb on + strand, within CA264_17010 at 3958.363 kb on + strand, within CA264_17010 at 3958.573 kb on + strand, within CA264_17010 at 3959.120 kb on + strand, within CA264_17010 at 3959.164 kb on + strand, within CA264_17010 at 3959.179 kb on + strand, within CA264_17010 at 3959.405 kb on + strand, within CA264_17010 at 3959.439 kb on + strand, within CA264_17010 at 3959.742 kb on + strand at 3959.743 kb on - strand at 3959.856 kb on + strand at 3959.879 kb on - strand at 3959.990 kb on + strand at 3960.022 kb on + strand at 3960.044 kb on + strand at 3960.061 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.067 kb on + strand at 3960.068 kb on - strand at 3960.068 kb on - strand at 3960.126 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,956,202 - +0.2 3,956,205 - +0.4 3,956,207 - -0.4 3,956,215 - -0.7 3,956,241 - +0.9 3,956,243 + -0.7 3,956,266 + -0.3 3,956,347 - CA264_17005 0.19 -1.2 3,956,368 + CA264_17005 0.23 -0.1 3,956,372 + CA264_17005 0.24 -0.2 3,956,372 + CA264_17005 0.24 +1.4 3,956,372 + CA264_17005 0.24 -0.4 3,956,373 - CA264_17005 0.24 -0.1 3,956,375 + CA264_17005 0.25 -2.0 3,956,375 + CA264_17005 0.25 +1.5 3,956,375 + CA264_17005 0.25 -1.7 3,956,375 + CA264_17005 0.25 -0.5 3,956,469 + CA264_17005 0.46 -0.0 3,956,476 + CA264_17005 0.48 -0.3 3,956,493 + CA264_17005 0.52 -0.7 3,956,628 - CA264_17005 0.82 -0.5 3,956,683 + -0.1 3,956,710 + -1.1 3,956,711 - -0.1 3,956,711 - -1.2 3,956,712 + -0.7 3,956,713 - -0.2 3,956,748 + -0.5 3,956,753 + -1.2 3,956,756 - +2.8 3,956,805 + -0.1 3,956,983 + -1.6 3,957,117 + +0.5 3,957,118 - -2.0 3,957,129 + -0.3 3,957,130 - -1.2 3,957,155 - -2.8 3,957,162 + -1.3 3,957,242 + -0.4 3,957,242 + -0.2 3,957,942 + CA264_17010 0.32 -0.4 3,957,942 + CA264_17010 0.32 +0.4 3,957,943 - CA264_17010 0.32 -3.8 3,957,943 - CA264_17010 0.32 -1.8 3,958,005 - CA264_17010 0.34 -2.3 3,958,028 + CA264_17010 0.35 -1.5 3,958,029 + CA264_17010 0.35 -2.6 3,958,042 + CA264_17010 0.35 -0.3 3,958,043 - CA264_17010 0.35 -3.2 3,958,105 + CA264_17010 0.37 -3.3 3,958,204 + CA264_17010 0.41 -2.3 3,958,204 + CA264_17010 0.41 -2.0 3,958,363 + CA264_17010 0.46 -1.2 3,958,573 + CA264_17010 0.53 -1.5 3,959,120 + CA264_17010 0.72 -2.1 3,959,164 + CA264_17010 0.73 -1.8 3,959,179 + CA264_17010 0.74 -3.0 3,959,405 + CA264_17010 0.82 +1.9 3,959,439 + CA264_17010 0.83 -1.4 3,959,742 + -4.0 3,959,743 - -0.7 3,959,856 + -2.7 3,959,879 - -2.8 3,959,990 + -1.2 3,960,022 + -0.5 3,960,044 + -0.6 3,960,061 + -0.3 3,960,067 + +0.2 3,960,067 + -0.2 3,960,067 + -0.9 3,960,067 + -1.7 3,960,067 + -0.8 3,960,067 + -0.2 3,960,067 + -2.8 3,960,067 + -1.3 3,960,068 - -1.4 3,960,068 - -1.2 3,960,126 - -0.6
Or see this region's nucleotide sequence