Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16865 and CA264_16870 are separated by 250 nucleotides CA264_16870 and CA264_16875 overlap by 4 nucleotides CA264_16875 and CA264_16880 are separated by 33 nucleotides CA264_16880 and CA264_16885 are separated by 123 nucleotides CA264_16885 and CA264_16890 are separated by 3 nucleotides
CA264_16865: CA264_16865 - hypothetical protein, at 3,933,818 to 3,934,045
_16865
CA264_16870: CA264_16870 - N-acetyltransferase, at 3,934,296 to 3,934,631
_16870
CA264_16875: CA264_16875 - hypothetical protein, at 3,934,628 to 3,934,933
_16875
CA264_16880: CA264_16880 - hypothetical protein, at 3,934,967 to 3,935,707
_16880
CA264_16885: CA264_16885 - alpha/beta hydrolase, at 3,935,831 to 3,936,547
_16885
CA264_16890: CA264_16890 - septal ring lytic transglycosylase RlpA family lipoprotein, at 3,936,551 to 3,936,988
_16890
Position (kb)
3934
3935
3936 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3934.166 kb on - strand at 3934.187 kb on + strand at 3934.188 kb on - strand at 3934.188 kb on - strand at 3934.258 kb on - strand at 3934.282 kb on - strand at 3934.286 kb on - strand at 3934.287 kb on + strand at 3934.287 kb on + strand at 3934.335 kb on + strand, within CA264_16870 at 3934.335 kb on + strand, within CA264_16870 at 3934.336 kb on - strand, within CA264_16870 at 3934.381 kb on + strand, within CA264_16870 at 3934.382 kb on - strand, within CA264_16870 at 3934.543 kb on - strand, within CA264_16870 at 3934.593 kb on - strand, within CA264_16870 at 3934.613 kb on + strand at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.731 kb on + strand, within CA264_16875 at 3934.732 kb on - strand, within CA264_16875 at 3934.793 kb on - strand, within CA264_16875 at 3934.793 kb on - strand, within CA264_16875 at 3934.944 kb on + strand at 3934.945 kb on - strand at 3934.952 kb on + strand at 3934.953 kb on - strand at 3934.953 kb on - strand at 3934.953 kb on - strand at 3934.959 kb on + strand at 3934.959 kb on + strand at 3934.959 kb on + strand at 3934.960 kb on - strand at 3934.963 kb on + strand at 3934.986 kb on + strand at 3934.986 kb on + strand at 3934.987 kb on - strand at 3935.055 kb on - strand, within CA264_16880 at 3935.055 kb on - strand, within CA264_16880 at 3935.085 kb on + strand, within CA264_16880 at 3935.085 kb on + strand, within CA264_16880 at 3935.085 kb on + strand, within CA264_16880 at 3935.085 kb on + strand, within CA264_16880 at 3935.086 kb on - strand, within CA264_16880 at 3935.087 kb on + strand, within CA264_16880 at 3935.088 kb on - strand, within CA264_16880 at 3935.100 kb on + strand, within CA264_16880 at 3935.105 kb on + strand, within CA264_16880 at 3935.105 kb on + strand, within CA264_16880 at 3935.106 kb on - strand, within CA264_16880 at 3935.159 kb on + strand, within CA264_16880 at 3935.159 kb on + strand, within CA264_16880 at 3935.160 kb on - strand, within CA264_16880 at 3935.160 kb on - strand, within CA264_16880 at 3935.231 kb on + strand, within CA264_16880 at 3935.283 kb on - strand, within CA264_16880 at 3935.284 kb on + strand, within CA264_16880 at 3935.284 kb on + strand, within CA264_16880 at 3935.300 kb on + strand, within CA264_16880 at 3935.300 kb on + strand, within CA264_16880 at 3935.300 kb on + strand, within CA264_16880 at 3935.366 kb on + strand, within CA264_16880 at 3935.489 kb on - strand, within CA264_16880 at 3935.509 kb on - strand, within CA264_16880 at 3935.638 kb on - strand at 3935.683 kb on - strand at 3935.684 kb on + strand at 3935.690 kb on + strand at 3935.691 kb on - strand at 3935.758 kb on + strand at 3935.759 kb on - strand at 3935.791 kb on - strand at 3935.796 kb on + strand at 3935.806 kb on + strand at 3935.828 kb on - strand at 3935.841 kb on + strand at 3936.032 kb on - strand, within CA264_16885 at 3936.052 kb on + strand, within CA264_16885 at 3936.052 kb on + strand, within CA264_16885 at 3936.053 kb on - strand, within CA264_16885 at 3936.053 kb on - strand, within CA264_16885 at 3936.056 kb on - strand, within CA264_16885 at 3936.065 kb on + strand, within CA264_16885 at 3936.262 kb on - strand, within CA264_16885 at 3936.262 kb on - strand, within CA264_16885 at 3936.432 kb on + strand, within CA264_16885 at 3936.432 kb on + strand, within CA264_16885 at 3936.433 kb on - strand, within CA264_16885 at 3936.433 kb on - strand, within CA264_16885 at 3936.438 kb on + strand, within CA264_16885 at 3936.532 kb on + strand at 3936.533 kb on - strand at 3936.533 kb on - strand at 3936.540 kb on + strand at 3936.550 kb on + strand at 3936.551 kb on - strand at 3936.601 kb on - strand, within CA264_16890 at 3936.624 kb on + strand, within CA264_16890 at 3936.625 kb on - strand, within CA264_16890 at 3936.625 kb on - strand, within CA264_16890
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,934,166 - +0.5 3,934,187 + +0.1 3,934,188 - -0.4 3,934,188 - +1.0 3,934,258 - +0.5 3,934,282 - -0.4 3,934,286 - +3.2 3,934,287 + +1.8 3,934,287 + +0.9 3,934,335 + CA264_16870 0.12 +1.5 3,934,335 + CA264_16870 0.12 +1.9 3,934,336 - CA264_16870 0.12 -0.1 3,934,381 + CA264_16870 0.25 +0.4 3,934,382 - CA264_16870 0.26 +0.5 3,934,543 - CA264_16870 0.74 -0.2 3,934,593 - CA264_16870 0.88 +0.5 3,934,613 + -1.5 3,934,731 + CA264_16875 0.34 +0.3 3,934,731 + CA264_16875 0.34 -0.2 3,934,731 + CA264_16875 0.34 +2.0 3,934,732 - CA264_16875 0.34 +0.5 3,934,793 - CA264_16875 0.54 -1.9 3,934,793 - CA264_16875 0.54 +1.6 3,934,944 + +1.1 3,934,945 - -0.3 3,934,952 + +1.0 3,934,953 - +0.2 3,934,953 - +0.1 3,934,953 - +0.8 3,934,959 + -0.7 3,934,959 + -0.1 3,934,959 + +2.6 3,934,960 - +0.6 3,934,963 + +1.1 3,934,986 + -0.1 3,934,986 + +0.1 3,934,987 - +0.7 3,935,055 - CA264_16880 0.12 -0.4 3,935,055 - CA264_16880 0.12 +1.5 3,935,085 + CA264_16880 0.16 +0.9 3,935,085 + CA264_16880 0.16 -2.0 3,935,085 + CA264_16880 0.16 -0.4 3,935,085 + CA264_16880 0.16 -1.7 3,935,086 - CA264_16880 0.16 -0.4 3,935,087 + CA264_16880 0.16 +0.5 3,935,088 - CA264_16880 0.16 -0.3 3,935,100 + CA264_16880 0.18 +0.4 3,935,105 + CA264_16880 0.19 -0.4 3,935,105 + CA264_16880 0.19 -0.9 3,935,106 - CA264_16880 0.19 +0.8 3,935,159 + CA264_16880 0.26 -0.6 3,935,159 + CA264_16880 0.26 -0.6 3,935,160 - CA264_16880 0.26 -0.2 3,935,160 - CA264_16880 0.26 -0.5 3,935,231 + CA264_16880 0.36 +0.5 3,935,283 - CA264_16880 0.43 -1.5 3,935,284 + CA264_16880 0.43 -0.7 3,935,284 + CA264_16880 0.43 -1.1 3,935,300 + CA264_16880 0.45 -2.4 3,935,300 + CA264_16880 0.45 -0.9 3,935,300 + CA264_16880 0.45 +0.2 3,935,366 + CA264_16880 0.54 +0.1 3,935,489 - CA264_16880 0.70 +0.6 3,935,509 - CA264_16880 0.73 -1.4 3,935,638 - -0.2 3,935,683 - +0.8 3,935,684 + -0.4 3,935,690 + +0.6 3,935,691 - -0.5 3,935,758 + +0.3 3,935,759 - +0.4 3,935,791 - +0.0 3,935,796 + -1.1 3,935,806 + -1.2 3,935,828 - +0.5 3,935,841 + +0.2 3,936,032 - CA264_16885 0.28 +0.9 3,936,052 + CA264_16885 0.31 -0.2 3,936,052 + CA264_16885 0.31 -0.2 3,936,053 - CA264_16885 0.31 +0.3 3,936,053 - CA264_16885 0.31 +0.4 3,936,056 - CA264_16885 0.31 -0.6 3,936,065 + CA264_16885 0.33 +0.9 3,936,262 - CA264_16885 0.60 -0.3 3,936,262 - CA264_16885 0.60 -0.1 3,936,432 + CA264_16885 0.84 -0.3 3,936,432 + CA264_16885 0.84 -0.4 3,936,433 - CA264_16885 0.84 -0.7 3,936,433 - CA264_16885 0.84 -1.4 3,936,438 + CA264_16885 0.85 +0.1 3,936,532 + +0.9 3,936,533 - -0.4 3,936,533 - -0.0 3,936,540 + +0.2 3,936,550 + -0.3 3,936,551 - +0.9 3,936,601 - CA264_16890 0.11 -0.2 3,936,624 + CA264_16890 0.17 +0.0 3,936,625 - CA264_16890 0.17 +0.6 3,936,625 - CA264_16890 0.17 -0.2
Or see this region's nucleotide sequence