Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16350 and CA264_16355 are separated by 71 nucleotides CA264_16355 and CA264_16360 are separated by 21 nucleotides CA264_16360 and CA264_16365 are separated by 49 nucleotides CA264_16365 and CA264_16370 are separated by 78 nucleotides
CA264_16350: CA264_16350 - excinuclease ABC subunit C, at 3,804,616 to 3,806,436
_16350
CA264_16355: CA264_16355 - gliding motility protein GldN, at 3,806,508 to 3,807,368
_16355
CA264_16360: CA264_16360 - gliding motility protein GldM, at 3,807,390 to 3,808,982
_16360
CA264_16365: CA264_16365 - gliding motility protein GldL, at 3,809,032 to 3,809,832
_16365
CA264_16370: CA264_16370 - gliding motility lipoprotein GldK, at 3,809,911 to 3,810,927
_16370
Position (kb)
3807
3808
3809 Strain fitness (log2 ratio)
-2
-1
0
1 at 3806.393 kb on + strand at 3806.394 kb on - strand at 3806.510 kb on + strand at 3806.510 kb on - strand at 3806.512 kb on + strand at 3806.527 kb on + strand at 3806.533 kb on + strand at 3806.593 kb on + strand at 3806.593 kb on + strand at 3806.593 kb on + strand at 3806.748 kb on + strand, within CA264_16355 at 3806.766 kb on - strand, within CA264_16355 at 3806.820 kb on - strand, within CA264_16355 at 3806.949 kb on - strand, within CA264_16355 at 3807.185 kb on + strand, within CA264_16355 at 3807.185 kb on + strand, within CA264_16355 at 3807.186 kb on - strand, within CA264_16355 at 3807.186 kb on - strand, within CA264_16355 at 3807.279 kb on - strand, within CA264_16355 at 3807.319 kb on - strand at 3807.348 kb on + strand at 3807.384 kb on + strand at 3807.388 kb on + strand at 3807.391 kb on + strand at 3807.483 kb on + strand at 3807.608 kb on + strand, within CA264_16360 at 3807.630 kb on + strand, within CA264_16360 at 3807.816 kb on + strand, within CA264_16360 at 3807.904 kb on + strand, within CA264_16360 at 3807.905 kb on - strand, within CA264_16360 at 3808.091 kb on + strand, within CA264_16360 at 3808.110 kb on - strand, within CA264_16360 at 3808.132 kb on - strand, within CA264_16360 at 3808.312 kb on - strand, within CA264_16360 at 3808.348 kb on + strand, within CA264_16360 at 3808.349 kb on - strand, within CA264_16360 at 3808.496 kb on + strand, within CA264_16360 at 3808.497 kb on - strand, within CA264_16360 at 3808.508 kb on + strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.564 kb on + strand, within CA264_16360 at 3808.779 kb on - strand, within CA264_16360 at 3808.809 kb on + strand, within CA264_16360 at 3808.810 kb on - strand, within CA264_16360 at 3808.927 kb on - strand at 3808.987 kb on + strand at 3808.990 kb on + strand at 3808.993 kb on - strand at 3808.993 kb on - strand at 3808.995 kb on + strand at 3808.995 kb on + strand at 3809.272 kb on + strand, within CA264_16365 at 3809.346 kb on - strand, within CA264_16365 at 3809.386 kb on + strand, within CA264_16365 at 3809.575 kb on + strand, within CA264_16365 at 3809.594 kb on + strand, within CA264_16365 at 3809.595 kb on - strand, within CA264_16365 at 3809.780 kb on - strand at 3809.848 kb on - strand at 3809.851 kb on + strand at 3809.851 kb on + strand at 3809.852 kb on - strand at 3809.867 kb on - strand at 3809.873 kb on + strand at 3809.905 kb on + strand at 3809.942 kb on + strand at 3809.969 kb on + strand at 3809.970 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,806,393 + -0.4 3,806,394 - -1.9 3,806,510 + +0.3 3,806,510 - +0.1 3,806,512 + -0.8 3,806,527 + -0.4 3,806,533 + +0.1 3,806,593 + -0.4 3,806,593 + +0.3 3,806,593 + -1.7 3,806,748 + CA264_16355 0.28 -1.3 3,806,766 - CA264_16355 0.30 +0.8 3,806,820 - CA264_16355 0.36 +0.0 3,806,949 - CA264_16355 0.51 -0.5 3,807,185 + CA264_16355 0.79 -1.1 3,807,185 + CA264_16355 0.79 -1.2 3,807,186 - CA264_16355 0.79 -0.4 3,807,186 - CA264_16355 0.79 -1.9 3,807,279 - CA264_16355 0.90 -1.4 3,807,319 - -1.8 3,807,348 + -0.4 3,807,384 + -0.7 3,807,388 + -0.5 3,807,391 + -0.6 3,807,483 + -0.4 3,807,608 + CA264_16360 0.14 -0.7 3,807,630 + CA264_16360 0.15 +0.4 3,807,816 + CA264_16360 0.27 +0.9 3,807,904 + CA264_16360 0.32 -1.6 3,807,905 - CA264_16360 0.32 -0.6 3,808,091 + CA264_16360 0.44 -1.6 3,808,110 - CA264_16360 0.45 +1.4 3,808,132 - CA264_16360 0.47 +0.3 3,808,312 - CA264_16360 0.58 -0.7 3,808,348 + CA264_16360 0.60 -1.7 3,808,349 - CA264_16360 0.60 -1.3 3,808,496 + CA264_16360 0.69 -0.2 3,808,497 - CA264_16360 0.69 -1.2 3,808,508 + CA264_16360 0.70 +0.6 3,808,538 - CA264_16360 0.72 -1.3 3,808,538 - CA264_16360 0.72 -0.2 3,808,538 - CA264_16360 0.72 -0.6 3,808,564 + CA264_16360 0.74 -0.6 3,808,779 - CA264_16360 0.87 -1.3 3,808,809 + CA264_16360 0.89 -0.4 3,808,810 - CA264_16360 0.89 +0.1 3,808,927 - -0.5 3,808,987 + -1.6 3,808,990 + -0.0 3,808,993 - +0.8 3,808,993 - -1.0 3,808,995 + -1.2 3,808,995 + +0.8 3,809,272 + CA264_16365 0.30 +0.1 3,809,346 - CA264_16365 0.39 -0.7 3,809,386 + CA264_16365 0.44 -1.6 3,809,575 + CA264_16365 0.68 -0.9 3,809,594 + CA264_16365 0.70 -0.1 3,809,595 - CA264_16365 0.70 -1.1 3,809,780 - -0.2 3,809,848 - +0.4 3,809,851 + -1.7 3,809,851 + -1.3 3,809,852 - -0.5 3,809,867 - -1.2 3,809,873 + -0.8 3,809,905 + -0.7 3,809,942 + -1.6 3,809,969 + -1.8 3,809,970 - -1.8
Or see this region's nucleotide sequence