Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15935 and CA264_15940 are separated by 113 nucleotides CA264_15940 and CA264_15945 are separated by 236 nucleotides CA264_15945 and CA264_15950 are separated by 404 nucleotides
CA264_15935: CA264_15935 - hypothetical protein, at 3,717,118 to 3,717,846
_15935
CA264_15940: CA264_15940 - hypothetical protein, at 3,717,960 to 3,718,601
_15940
CA264_15945: CA264_15945 - NAD-dependent epimerase, at 3,718,838 to 3,719,812
_15945
CA264_15950: CA264_15950 - hypothetical protein, at 3,720,217 to 3,721,500
_15950
Position (kb)
3718
3719
3720 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3717.839 kb on - strand at 3717.851 kb on + strand at 3717.852 kb on - strand at 3717.868 kb on - strand at 3717.868 kb on - strand at 3717.869 kb on + strand at 3717.877 kb on - strand at 3717.877 kb on - strand at 3717.893 kb on + strand at 3717.961 kb on + strand at 3718.034 kb on + strand, within CA264_15940 at 3718.035 kb on - strand, within CA264_15940 at 3718.035 kb on - strand, within CA264_15940 at 3718.118 kb on - strand, within CA264_15940 at 3718.135 kb on + strand, within CA264_15940 at 3718.136 kb on - strand, within CA264_15940 at 3718.178 kb on - strand, within CA264_15940 at 3718.178 kb on - strand, within CA264_15940 at 3718.221 kb on + strand, within CA264_15940 at 3718.222 kb on - strand, within CA264_15940 at 3718.279 kb on + strand, within CA264_15940 at 3718.379 kb on - strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.384 kb on + strand, within CA264_15940 at 3718.385 kb on - strand, within CA264_15940 at 3718.588 kb on - strand at 3718.608 kb on - strand at 3718.609 kb on + strand at 3718.609 kb on + strand at 3718.626 kb on - strand at 3718.640 kb on + strand at 3718.640 kb on + strand at 3718.649 kb on + strand at 3718.649 kb on + strand at 3718.649 kb on + strand at 3718.650 kb on - strand at 3718.651 kb on + strand at 3718.651 kb on + strand at 3718.652 kb on - strand at 3718.652 kb on - strand at 3718.654 kb on + strand at 3718.654 kb on + strand at 3718.654 kb on + strand at 3718.655 kb on - strand at 3718.655 kb on - strand at 3718.656 kb on + strand at 3718.657 kb on - strand at 3718.658 kb on + strand at 3718.659 kb on - strand at 3718.662 kb on - strand at 3718.662 kb on - strand at 3718.734 kb on + strand at 3718.771 kb on + strand at 3718.822 kb on - strand at 3718.829 kb on + strand at 3718.839 kb on + strand at 3718.840 kb on - strand at 3718.906 kb on + strand at 3718.906 kb on + strand at 3718.952 kb on + strand, within CA264_15945 at 3718.952 kb on + strand, within CA264_15945 at 3718.953 kb on - strand, within CA264_15945 at 3719.001 kb on + strand, within CA264_15945 at 3719.141 kb on + strand, within CA264_15945 at 3719.157 kb on + strand, within CA264_15945 at 3719.157 kb on + strand, within CA264_15945 at 3719.158 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.173 kb on - strand, within CA264_15945 at 3719.226 kb on + strand, within CA264_15945 at 3719.226 kb on + strand, within CA264_15945 at 3719.227 kb on - strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.230 kb on + strand, within CA264_15945 at 3719.231 kb on - strand, within CA264_15945 at 3719.231 kb on - strand, within CA264_15945 at 3719.272 kb on + strand, within CA264_15945 at 3719.272 kb on + strand, within CA264_15945 at 3719.335 kb on - strand, within CA264_15945 at 3719.373 kb on + strand, within CA264_15945 at 3719.503 kb on + strand, within CA264_15945 at 3719.504 kb on - strand, within CA264_15945 at 3719.727 kb on + strand at 3719.728 kb on - strand at 3719.728 kb on - strand at 3719.728 kb on - strand at 3719.763 kb on - strand at 3719.817 kb on + strand at 3719.817 kb on + strand at 3719.818 kb on - strand at 3719.970 kb on - strand at 3719.970 kb on - strand at 3719.974 kb on - strand at 3719.979 kb on - strand at 3719.979 kb on - strand at 3720.012 kb on + strand at 3720.013 kb on - strand at 3720.061 kb on - strand at 3720.065 kb on - strand at 3720.065 kb on - strand at 3720.067 kb on + strand at 3720.068 kb on - strand at 3720.078 kb on + strand at 3720.125 kb on + strand at 3720.126 kb on - strand at 3720.126 kb on - strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.160 kb on + strand at 3720.161 kb on - strand at 3720.161 kb on - strand at 3720.161 kb on - strand at 3720.165 kb on - strand at 3720.165 kb on - strand at 3720.165 kb on - strand at 3720.190 kb on + strand at 3720.194 kb on + strand at 3720.216 kb on + strand at 3720.217 kb on - strand at 3720.347 kb on + strand, within CA264_15950 at 3720.584 kb on + strand, within CA264_15950 at 3720.681 kb on - strand, within CA264_15950 at 3720.685 kb on - strand, within CA264_15950 at 3720.777 kb on - strand, within CA264_15950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,717,839 - +1.5 3,717,851 + -0.7 3,717,852 - -0.2 3,717,868 - -0.8 3,717,868 - +1.1 3,717,869 + +0.7 3,717,877 - +0.2 3,717,877 - -0.2 3,717,893 + -0.8 3,717,961 + -1.4 3,718,034 + CA264_15940 0.12 -0.4 3,718,035 - CA264_15940 0.12 +0.5 3,718,035 - CA264_15940 0.12 -0.2 3,718,118 - CA264_15940 0.25 -0.2 3,718,135 + CA264_15940 0.27 -0.6 3,718,136 - CA264_15940 0.27 -0.3 3,718,178 - CA264_15940 0.34 -0.5 3,718,178 - CA264_15940 0.34 -0.3 3,718,221 + CA264_15940 0.41 +1.2 3,718,222 - CA264_15940 0.41 +1.7 3,718,279 + CA264_15940 0.50 +0.3 3,718,379 - CA264_15940 0.65 +0.3 3,718,384 + CA264_15940 0.66 -0.1 3,718,384 + CA264_15940 0.66 -0.3 3,718,384 + CA264_15940 0.66 +0.8 3,718,384 + CA264_15940 0.66 +0.2 3,718,384 + CA264_15940 0.66 -0.2 3,718,385 - CA264_15940 0.66 -0.4 3,718,588 - +1.3 3,718,608 - -0.8 3,718,609 + +0.6 3,718,609 + -0.6 3,718,626 - -0.2 3,718,640 + +0.2 3,718,640 + +1.0 3,718,649 + -0.4 3,718,649 + +0.8 3,718,649 + +0.0 3,718,650 - +0.5 3,718,651 + -0.0 3,718,651 + +0.4 3,718,652 - +0.1 3,718,652 - +0.4 3,718,654 + +0.7 3,718,654 + -0.1 3,718,654 + -0.8 3,718,655 - +0.8 3,718,655 - -0.8 3,718,656 + -0.7 3,718,657 - +0.0 3,718,658 + -1.3 3,718,659 - +0.2 3,718,662 - -0.8 3,718,662 - -0.0 3,718,734 + -0.6 3,718,771 + +0.4 3,718,822 - -0.5 3,718,829 + +0.8 3,718,839 + -1.9 3,718,840 - +0.9 3,718,906 + -0.6 3,718,906 + -0.2 3,718,952 + CA264_15945 0.12 -1.7 3,718,952 + CA264_15945 0.12 +0.1 3,718,953 - CA264_15945 0.12 -2.2 3,719,001 + CA264_15945 0.17 -2.4 3,719,141 + CA264_15945 0.31 -1.4 3,719,157 + CA264_15945 0.33 -1.4 3,719,157 + CA264_15945 0.33 -1.0 3,719,158 - CA264_15945 0.33 -2.6 3,719,173 - CA264_15945 0.34 +0.1 3,719,173 - CA264_15945 0.34 -2.0 3,719,173 - CA264_15945 0.34 -2.7 3,719,173 - CA264_15945 0.34 -2.1 3,719,173 - CA264_15945 0.34 -3.6 3,719,226 + CA264_15945 0.40 -1.9 3,719,226 + CA264_15945 0.40 -1.1 3,719,227 - CA264_15945 0.40 -2.0 3,719,230 + CA264_15945 0.40 -1.3 3,719,230 + CA264_15945 0.40 -1.4 3,719,230 + CA264_15945 0.40 -1.6 3,719,231 - CA264_15945 0.40 -0.5 3,719,231 - CA264_15945 0.40 -1.7 3,719,272 + CA264_15945 0.45 -3.9 3,719,272 + CA264_15945 0.45 -2.7 3,719,335 - CA264_15945 0.51 -3.2 3,719,373 + CA264_15945 0.55 +0.5 3,719,503 + CA264_15945 0.68 -1.4 3,719,504 - CA264_15945 0.68 -2.2 3,719,727 + -1.2 3,719,728 - -0.8 3,719,728 - -1.0 3,719,728 - -1.4 3,719,763 - +0.2 3,719,817 + -0.3 3,719,817 + -0.1 3,719,818 - -0.9 3,719,970 - +1.5 3,719,970 - +0.2 3,719,974 - -0.2 3,719,979 - +0.2 3,719,979 - +0.0 3,720,012 + -0.8 3,720,013 - -0.3 3,720,061 - +0.2 3,720,065 - -0.2 3,720,065 - -0.0 3,720,067 + -0.2 3,720,068 - +0.3 3,720,078 + +0.1 3,720,125 + -0.2 3,720,126 - +0.1 3,720,126 - +0.2 3,720,160 + -1.7 3,720,160 + -0.1 3,720,160 + +0.7 3,720,160 + -0.2 3,720,160 + -0.3 3,720,161 - -0.4 3,720,161 - -0.6 3,720,161 - +0.5 3,720,165 - -0.0 3,720,165 - +0.8 3,720,165 - +0.7 3,720,190 + +0.2 3,720,194 + -0.0 3,720,216 + +0.4 3,720,217 - +0.8 3,720,347 + CA264_15950 0.10 -0.8 3,720,584 + CA264_15950 0.29 -1.8 3,720,681 - CA264_15950 0.36 -0.2 3,720,685 - CA264_15950 0.36 -0.6 3,720,777 - CA264_15950 0.44 -0.2
Or see this region's nucleotide sequence