Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15420 and CA264_15425 are separated by 41 nucleotides CA264_15425 and CA264_15430 are separated by 438 nucleotides CA264_15430 and CA264_15435 are separated by 254 nucleotides
CA264_15420: CA264_15420 - hypothetical protein, at 3,611,694 to 3,614,132
_15420
CA264_15425: CA264_15425 - DUF4834 domain-containing protein, at 3,614,174 to 3,614,452
_15425
CA264_15430: CA264_15430 - carbamoyl phosphate synthase large subunit, at 3,614,891 to 3,617,704
_15430
CA264_15435: CA264_15435 - hypothetical protein, at 3,617,959 to 3,618,948
_15435
Position (kb)
3614
3615
3616
3617
3618 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3614.132 kb on + strand at 3614.132 kb on + strand at 3614.132 kb on + strand at 3614.166 kb on + strand at 3614.181 kb on - strand at 3614.200 kb on - strand at 3614.328 kb on + strand, within CA264_15425 at 3614.384 kb on + strand, within CA264_15425 at 3614.404 kb on + strand, within CA264_15425 at 3614.435 kb on - strand at 3614.438 kb on + strand at 3614.480 kb on + strand at 3614.484 kb on + strand at 3614.484 kb on + strand at 3614.484 kb on + strand at 3614.486 kb on + strand at 3614.487 kb on - strand at 3614.515 kb on - strand at 3614.570 kb on + strand at 3614.577 kb on + strand at 3614.577 kb on + strand at 3614.652 kb on - strand at 3614.664 kb on + strand at 3614.669 kb on + strand at 3614.670 kb on - strand at 3614.670 kb on - strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.683 kb on + strand at 3614.684 kb on - strand at 3614.684 kb on - strand at 3614.685 kb on + strand at 3614.692 kb on + strand at 3614.837 kb on + strand at 3614.838 kb on - strand at 3614.878 kb on - strand at 3614.883 kb on + strand at 3614.885 kb on + strand at 3614.886 kb on - strand at 3614.886 kb on - strand at 3614.886 kb on - strand at 3614.892 kb on + strand at 3614.893 kb on - strand at 3614.938 kb on - strand at 3614.959 kb on + strand at 3615.031 kb on - strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.067 kb on + strand at 3615.068 kb on - strand at 3615.082 kb on + strand at 3615.082 kb on + strand at 3615.083 kb on - strand at 3615.127 kb on - strand at 3615.135 kb on + strand at 3615.136 kb on - strand at 3615.148 kb on - strand at 3615.172 kb on + strand at 3615.173 kb on - strand, within CA264_15430 at 3615.205 kb on - strand, within CA264_15430 at 3615.339 kb on + strand, within CA264_15430 at 3615.397 kb on - strand, within CA264_15430 at 3615.739 kb on + strand, within CA264_15430 at 3615.841 kb on + strand, within CA264_15430 at 3615.841 kb on + strand, within CA264_15430 at 3615.842 kb on - strand, within CA264_15430 at 3615.936 kb on + strand, within CA264_15430 at 3616.043 kb on - strand, within CA264_15430 at 3616.049 kb on + strand, within CA264_15430 at 3616.084 kb on - strand, within CA264_15430 at 3616.084 kb on - strand, within CA264_15430 at 3616.086 kb on + strand, within CA264_15430 at 3616.089 kb on + strand, within CA264_15430 at 3616.089 kb on + strand, within CA264_15430 at 3616.089 kb on + strand, within CA264_15430 at 3616.147 kb on + strand, within CA264_15430 at 3616.233 kb on - strand, within CA264_15430 at 3616.278 kb on + strand, within CA264_15430 at 3616.279 kb on - strand, within CA264_15430 at 3616.647 kb on + strand, within CA264_15430 at 3616.648 kb on - strand, within CA264_15430 at 3616.717 kb on - strand, within CA264_15430 at 3616.717 kb on - strand, within CA264_15430 at 3616.858 kb on + strand, within CA264_15430 at 3616.858 kb on + strand, within CA264_15430 at 3617.093 kb on + strand, within CA264_15430 at 3617.205 kb on - strand, within CA264_15430 at 3617.461 kb on + strand at 3617.462 kb on - strand at 3617.462 kb on - strand at 3617.488 kb on - strand at 3617.582 kb on - strand at 3617.653 kb on + strand at 3617.668 kb on + strand at 3617.668 kb on + strand at 3617.671 kb on + strand at 3617.672 kb on - strand at 3617.713 kb on + strand at 3617.782 kb on - strand at 3617.782 kb on - strand at 3617.786 kb on - strand at 3618.025 kb on + strand at 3618.045 kb on + strand at 3618.046 kb on - strand at 3618.046 kb on - strand at 3618.069 kb on + strand, within CA264_15435 at 3618.073 kb on + strand, within CA264_15435 at 3618.073 kb on + strand, within CA264_15435 at 3618.073 kb on + strand, within CA264_15435 at 3618.073 kb on + strand, within CA264_15435 at 3618.074 kb on - strand, within CA264_15435 at 3618.074 kb on - strand, within CA264_15435 at 3618.103 kb on + strand, within CA264_15435 at 3618.161 kb on + strand, within CA264_15435 at 3618.162 kb on - strand, within CA264_15435 at 3618.162 kb on - strand, within CA264_15435 at 3618.203 kb on + strand, within CA264_15435 at 3618.254 kb on + strand, within CA264_15435 at 3618.291 kb on + strand, within CA264_15435 at 3618.291 kb on + strand, within CA264_15435 at 3618.295 kb on + strand, within CA264_15435 at 3618.375 kb on - strand, within CA264_15435 at 3618.380 kb on - strand, within CA264_15435 at 3618.475 kb on - strand, within CA264_15435 at 3618.501 kb on - strand, within CA264_15435 at 3618.508 kb on - strand, within CA264_15435 at 3618.586 kb on - strand, within CA264_15435 at 3618.586 kb on - strand, within CA264_15435 at 3618.610 kb on - strand, within CA264_15435 at 3618.686 kb on + strand, within CA264_15435 at 3618.686 kb on + strand, within CA264_15435
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,614,132 + +2.6 3,614,132 + -0.1 3,614,132 + -0.8 3,614,166 + -0.4 3,614,181 - +0.5 3,614,200 - -0.9 3,614,328 + CA264_15425 0.55 -0.6 3,614,384 + CA264_15425 0.75 +1.4 3,614,404 + CA264_15425 0.82 +0.1 3,614,435 - -0.4 3,614,438 + -0.3 3,614,480 + -1.1 3,614,484 + +0.7 3,614,484 + -2.9 3,614,484 + -0.8 3,614,486 + +0.5 3,614,487 - -1.4 3,614,515 - -3.2 3,614,570 + +0.1 3,614,577 + -1.1 3,614,577 + -0.6 3,614,652 - -1.9 3,614,664 + -0.8 3,614,669 + -0.6 3,614,670 - -1.3 3,614,670 - -2.3 3,614,683 + +0.2 3,614,683 + +0.4 3,614,683 + -0.7 3,614,683 + -0.7 3,614,684 - -4.6 3,614,684 - -1.2 3,614,685 + -1.0 3,614,692 + -1.0 3,614,837 + +0.3 3,614,838 - -1.4 3,614,878 - -0.4 3,614,883 + -0.2 3,614,885 + +0.5 3,614,886 - +0.4 3,614,886 - -0.0 3,614,886 - +0.4 3,614,892 + -0.7 3,614,893 - +0.3 3,614,938 - -1.7 3,614,959 + +0.6 3,615,031 - -0.2 3,615,067 + -0.4 3,615,067 + +0.1 3,615,067 + -0.5 3,615,067 + -0.5 3,615,068 - -0.6 3,615,082 + -0.1 3,615,082 + +0.2 3,615,083 - -0.2 3,615,127 - +0.2 3,615,135 + -0.0 3,615,136 - -0.8 3,615,148 - -0.9 3,615,172 + +1.3 3,615,173 - CA264_15430 0.10 -0.6 3,615,205 - CA264_15430 0.11 -1.1 3,615,339 + CA264_15430 0.16 +0.1 3,615,397 - CA264_15430 0.18 -0.2 3,615,739 + CA264_15430 0.30 +0.2 3,615,841 + CA264_15430 0.34 -0.3 3,615,841 + CA264_15430 0.34 +0.0 3,615,842 - CA264_15430 0.34 +0.6 3,615,936 + CA264_15430 0.37 -0.4 3,616,043 - CA264_15430 0.41 -2.2 3,616,049 + CA264_15430 0.41 -1.4 3,616,084 - CA264_15430 0.42 -0.1 3,616,084 - CA264_15430 0.42 -1.3 3,616,086 + CA264_15430 0.42 +0.2 3,616,089 + CA264_15430 0.43 -1.6 3,616,089 + CA264_15430 0.43 -0.3 3,616,089 + CA264_15430 0.43 +0.3 3,616,147 + CA264_15430 0.45 -0.8 3,616,233 - CA264_15430 0.48 +0.8 3,616,278 + CA264_15430 0.49 +2.4 3,616,279 - CA264_15430 0.49 -0.3 3,616,647 + CA264_15430 0.62 -0.5 3,616,648 - CA264_15430 0.62 -0.8 3,616,717 - CA264_15430 0.65 -0.4 3,616,717 - CA264_15430 0.65 -0.9 3,616,858 + CA264_15430 0.70 -2.2 3,616,858 + CA264_15430 0.70 -0.2 3,617,093 + CA264_15430 0.78 -0.4 3,617,205 - CA264_15430 0.82 -0.3 3,617,461 + -1.1 3,617,462 - -0.9 3,617,462 - -0.9 3,617,488 - +1.1 3,617,582 - -0.1 3,617,653 + -0.5 3,617,668 + -0.7 3,617,668 + -0.5 3,617,671 + -0.2 3,617,672 - -0.6 3,617,713 + -0.6 3,617,782 - +0.3 3,617,782 - -1.0 3,617,786 - -0.0 3,618,025 + -0.3 3,618,045 + +0.6 3,618,046 - -0.5 3,618,046 - -0.0 3,618,069 + CA264_15435 0.11 +0.2 3,618,073 + CA264_15435 0.12 -0.0 3,618,073 + CA264_15435 0.12 +0.4 3,618,073 + CA264_15435 0.12 -1.9 3,618,073 + CA264_15435 0.12 +1.1 3,618,074 - CA264_15435 0.12 -0.4 3,618,074 - CA264_15435 0.12 -0.1 3,618,103 + CA264_15435 0.15 +0.0 3,618,161 + CA264_15435 0.20 -0.2 3,618,162 - CA264_15435 0.21 -0.4 3,618,162 - CA264_15435 0.21 +0.0 3,618,203 + CA264_15435 0.25 -0.3 3,618,254 + CA264_15435 0.30 +0.3 3,618,291 + CA264_15435 0.34 -1.1 3,618,291 + CA264_15435 0.34 +0.2 3,618,295 + CA264_15435 0.34 -0.6 3,618,375 - CA264_15435 0.42 -0.2 3,618,380 - CA264_15435 0.43 +0.1 3,618,475 - CA264_15435 0.52 +0.3 3,618,501 - CA264_15435 0.55 -0.1 3,618,508 - CA264_15435 0.55 -0.9 3,618,586 - CA264_15435 0.63 +0.0 3,618,586 - CA264_15435 0.63 +0.4 3,618,610 - CA264_15435 0.66 +0.2 3,618,686 + CA264_15435 0.73 +0.8 3,618,686 + CA264_15435 0.73 +0.1
Or see this region's nucleotide sequence