Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15305 and CA264_15310 are separated by 29 nucleotides CA264_15310 and CA264_15315 are separated by 24 nucleotides
CA264_15305: CA264_15305 - hypothetical protein, at 3,581,305 to 3,582,339
_15305
CA264_15310: CA264_15310 - hypothetical protein, at 3,582,369 to 3,583,385
_15310
CA264_15315: CA264_15315 - hypothetical protein, at 3,583,410 to 3,584,444
_15315
Position (kb)
3582
3583
3584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3581.384 kb on + strand at 3581.389 kb on + strand at 3581.389 kb on + strand at 3581.390 kb on - strand at 3581.390 kb on - strand at 3581.390 kb on - strand at 3581.406 kb on + strand at 3581.406 kb on + strand at 3581.410 kb on + strand, within CA264_15305 at 3581.411 kb on - strand, within CA264_15305 at 3581.421 kb on + strand, within CA264_15305 at 3581.421 kb on + strand, within CA264_15305 at 3581.421 kb on + strand, within CA264_15305 at 3581.422 kb on - strand, within CA264_15305 at 3581.424 kb on + strand, within CA264_15305 at 3581.473 kb on + strand, within CA264_15305 at 3581.473 kb on + strand, within CA264_15305 at 3581.478 kb on + strand, within CA264_15305 at 3581.479 kb on - strand, within CA264_15305 at 3581.481 kb on - strand, within CA264_15305 at 3581.568 kb on - strand, within CA264_15305 at 3581.583 kb on + strand, within CA264_15305 at 3581.583 kb on + strand, within CA264_15305 at 3581.584 kb on - strand, within CA264_15305 at 3581.586 kb on + strand, within CA264_15305 at 3581.587 kb on - strand, within CA264_15305 at 3581.624 kb on + strand, within CA264_15305 at 3581.625 kb on - strand, within CA264_15305 at 3581.625 kb on - strand, within CA264_15305 at 3581.658 kb on + strand, within CA264_15305 at 3581.662 kb on + strand, within CA264_15305 at 3581.700 kb on + strand, within CA264_15305 at 3581.706 kb on + strand, within CA264_15305 at 3581.707 kb on - strand, within CA264_15305 at 3582.167 kb on + strand, within CA264_15305 at 3582.192 kb on - strand, within CA264_15305 at 3582.207 kb on - strand, within CA264_15305 at 3582.211 kb on + strand, within CA264_15305 at 3582.212 kb on - strand, within CA264_15305 at 3582.307 kb on + strand at 3582.308 kb on - strand at 3582.322 kb on - strand at 3582.323 kb on + strand at 3582.323 kb on + strand at 3582.323 kb on + strand at 3582.340 kb on - strand at 3582.340 kb on - strand at 3582.353 kb on - strand at 3582.353 kb on - strand at 3582.360 kb on - strand at 3582.452 kb on + strand at 3582.452 kb on + strand at 3582.452 kb on + strand at 3582.453 kb on - strand at 3582.453 kb on - strand at 3582.537 kb on + strand, within CA264_15310 at 3582.544 kb on + strand, within CA264_15310 at 3582.631 kb on + strand, within CA264_15310 at 3582.631 kb on + strand, within CA264_15310 at 3582.658 kb on + strand, within CA264_15310 at 3582.659 kb on - strand, within CA264_15310 at 3582.666 kb on + strand, within CA264_15310 at 3582.673 kb on + strand, within CA264_15310 at 3582.674 kb on - strand, within CA264_15310 at 3582.678 kb on - strand, within CA264_15310 at 3582.678 kb on - strand, within CA264_15310 at 3582.685 kb on - strand, within CA264_15310 at 3582.688 kb on + strand, within CA264_15310 at 3582.843 kb on - strand, within CA264_15310 at 3582.843 kb on - strand, within CA264_15310 at 3583.184 kb on - strand, within CA264_15310 at 3583.184 kb on - strand, within CA264_15310 at 3583.366 kb on - strand at 3583.371 kb on + strand at 3583.372 kb on - strand at 3583.474 kb on + strand at 3583.494 kb on + strand at 3583.494 kb on + strand at 3583.494 kb on + strand at 3583.494 kb on + strand at 3583.494 kb on + strand at 3583.494 kb on + strand at 3583.495 kb on - strand at 3583.495 kb on - strand at 3583.585 kb on + strand, within CA264_15315 at 3583.673 kb on - strand, within CA264_15315 at 3583.707 kb on - strand, within CA264_15315 at 3583.745 kb on + strand, within CA264_15315 at 3583.827 kb on + strand, within CA264_15315 at 3583.831 kb on + strand, within CA264_15315 at 3583.831 kb on + strand, within CA264_15315 at 3583.831 kb on + strand, within CA264_15315 at 3583.831 kb on + strand, within CA264_15315 at 3583.840 kb on - strand, within CA264_15315 at 3583.840 kb on - strand, within CA264_15315 at 3583.853 kb on + strand, within CA264_15315 at 3583.878 kb on + strand, within CA264_15315 at 3583.879 kb on - strand, within CA264_15315 at 3583.882 kb on + strand, within CA264_15315 at 3583.909 kb on + strand, within CA264_15315 at 3583.969 kb on - strand, within CA264_15315 at 3584.005 kb on - strand, within CA264_15315 at 3584.005 kb on - strand, within CA264_15315 at 3584.058 kb on + strand, within CA264_15315 at 3584.059 kb on - strand, within CA264_15315 at 3584.060 kb on + strand, within CA264_15315 at 3584.123 kb on + strand, within CA264_15315 at 3584.123 kb on + strand, within CA264_15315 at 3584.130 kb on - strand, within CA264_15315 at 3584.132 kb on - strand, within CA264_15315 at 3584.142 kb on + strand, within CA264_15315 at 3584.177 kb on - strand, within CA264_15315 at 3584.179 kb on + strand, within CA264_15315 at 3584.179 kb on + strand, within CA264_15315 at 3584.182 kb on + strand, within CA264_15315 at 3584.209 kb on + strand, within CA264_15315 at 3584.209 kb on + strand, within CA264_15315 at 3584.269 kb on + strand, within CA264_15315 at 3584.282 kb on - strand, within CA264_15315 at 3584.282 kb on - strand, within CA264_15315 at 3584.309 kb on - strand, within CA264_15315
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,581,384 + -0.9 3,581,389 + -0.4 3,581,389 + +0.6 3,581,390 - +0.1 3,581,390 - +0.4 3,581,390 - -0.1 3,581,406 + -0.2 3,581,406 + -0.7 3,581,410 + CA264_15305 0.10 +0.7 3,581,411 - CA264_15305 0.10 +1.1 3,581,421 + CA264_15305 0.11 -0.5 3,581,421 + CA264_15305 0.11 +0.4 3,581,421 + CA264_15305 0.11 +0.6 3,581,422 - CA264_15305 0.11 -0.6 3,581,424 + CA264_15305 0.11 +0.3 3,581,473 + CA264_15305 0.16 -0.5 3,581,473 + CA264_15305 0.16 -1.4 3,581,478 + CA264_15305 0.17 +0.7 3,581,479 - CA264_15305 0.17 -0.2 3,581,481 - CA264_15305 0.17 -0.6 3,581,568 - CA264_15305 0.25 -2.3 3,581,583 + CA264_15305 0.27 -0.3 3,581,583 + CA264_15305 0.27 -1.7 3,581,584 - CA264_15305 0.27 +1.3 3,581,586 + CA264_15305 0.27 +0.8 3,581,587 - CA264_15305 0.27 -1.0 3,581,624 + CA264_15305 0.31 -0.0 3,581,625 - CA264_15305 0.31 -0.7 3,581,625 - CA264_15305 0.31 -0.1 3,581,658 + CA264_15305 0.34 -0.7 3,581,662 + CA264_15305 0.34 +0.2 3,581,700 + CA264_15305 0.38 +0.8 3,581,706 + CA264_15305 0.39 +0.3 3,581,707 - CA264_15305 0.39 -0.9 3,582,167 + CA264_15305 0.83 -0.8 3,582,192 - CA264_15305 0.86 +0.0 3,582,207 - CA264_15305 0.87 -0.5 3,582,211 + CA264_15305 0.88 -0.4 3,582,212 - CA264_15305 0.88 +0.6 3,582,307 + -2.0 3,582,308 - -0.4 3,582,322 - -1.3 3,582,323 + +0.0 3,582,323 + -0.1 3,582,323 + +0.7 3,582,340 - +0.4 3,582,340 - +0.3 3,582,353 - -0.6 3,582,353 - -0.2 3,582,360 - -0.1 3,582,452 + +0.0 3,582,452 + -0.2 3,582,452 + +0.1 3,582,453 - +2.0 3,582,453 - +1.0 3,582,537 + CA264_15310 0.17 -0.2 3,582,544 + CA264_15310 0.17 -0.1 3,582,631 + CA264_15310 0.26 -0.4 3,582,631 + CA264_15310 0.26 +0.1 3,582,658 + CA264_15310 0.28 -0.3 3,582,659 - CA264_15310 0.29 +0.4 3,582,666 + CA264_15310 0.29 -0.3 3,582,673 + CA264_15310 0.30 +0.5 3,582,674 - CA264_15310 0.30 -0.5 3,582,678 - CA264_15310 0.30 -1.2 3,582,678 - CA264_15310 0.30 +0.1 3,582,685 - CA264_15310 0.31 -0.8 3,582,688 + CA264_15310 0.31 -0.9 3,582,843 - CA264_15310 0.47 -0.9 3,582,843 - CA264_15310 0.47 -0.2 3,583,184 - CA264_15310 0.80 -0.0 3,583,184 - CA264_15310 0.80 -0.5 3,583,366 - -1.2 3,583,371 + -0.9 3,583,372 - -0.3 3,583,474 + +0.3 3,583,494 + +0.1 3,583,494 + +0.4 3,583,494 + -0.4 3,583,494 + +0.4 3,583,494 + -0.2 3,583,494 + +0.0 3,583,495 - -0.9 3,583,495 - +0.0 3,583,585 + CA264_15315 0.17 -0.5 3,583,673 - CA264_15315 0.25 -2.1 3,583,707 - CA264_15315 0.29 -0.3 3,583,745 + CA264_15315 0.32 +1.0 3,583,827 + CA264_15315 0.40 -0.1 3,583,831 + CA264_15315 0.41 +0.2 3,583,831 + CA264_15315 0.41 +0.4 3,583,831 + CA264_15315 0.41 +0.5 3,583,831 + CA264_15315 0.41 -0.9 3,583,840 - CA264_15315 0.42 +0.5 3,583,840 - CA264_15315 0.42 +0.3 3,583,853 + CA264_15315 0.43 -0.4 3,583,878 + CA264_15315 0.45 -0.1 3,583,879 - CA264_15315 0.45 -0.3 3,583,882 + CA264_15315 0.46 +0.5 3,583,909 + CA264_15315 0.48 -0.5 3,583,969 - CA264_15315 0.54 +0.8 3,584,005 - CA264_15315 0.57 -1.1 3,584,005 - CA264_15315 0.57 +0.0 3,584,058 + CA264_15315 0.63 -0.1 3,584,059 - CA264_15315 0.63 -1.1 3,584,060 + CA264_15315 0.63 -0.2 3,584,123 + CA264_15315 0.69 +1.7 3,584,123 + CA264_15315 0.69 -0.9 3,584,130 - CA264_15315 0.70 -0.3 3,584,132 - CA264_15315 0.70 -0.1 3,584,142 + CA264_15315 0.71 -1.0 3,584,177 - CA264_15315 0.74 -0.1 3,584,179 + CA264_15315 0.74 +0.2 3,584,179 + CA264_15315 0.74 -0.4 3,584,182 + CA264_15315 0.75 +0.6 3,584,209 + CA264_15315 0.77 -0.2 3,584,209 + CA264_15315 0.77 +0.7 3,584,269 + CA264_15315 0.83 +0.1 3,584,282 - CA264_15315 0.84 +1.4 3,584,282 - CA264_15315 0.84 +0.0 3,584,309 - CA264_15315 0.87 +0.4
Or see this region's nucleotide sequence