Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13930 and CA264_13935 are separated by 34 nucleotides CA264_13935 and CA264_13940 are separated by 31 nucleotides
CA264_13930: CA264_13930 - alpha-N-arabinofuranosidase, at 3,252,496 to 3,253,599
_13930
CA264_13935: CA264_13935 - glycoside hydrolase 43 family protein, at 3,253,634 to 3,255,361
_13935
CA264_13940: CA264_13940 - glycosyl hydrolase, at 3,255,393 to 3,258,350
_13940
Position (kb)
3253
3254
3255
3256 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.637 kb on - strand, within CA264_13930 at 3252.637 kb on - strand, within CA264_13930 at 3252.695 kb on - strand, within CA264_13930 at 3252.770 kb on + strand, within CA264_13930 at 3252.779 kb on + strand, within CA264_13930 at 3252.779 kb on + strand, within CA264_13930 at 3252.783 kb on - strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.795 kb on - strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.855 kb on + strand, within CA264_13930 at 3252.864 kb on + strand, within CA264_13930 at 3252.864 kb on + strand, within CA264_13930 at 3252.869 kb on - strand, within CA264_13930 at 3252.933 kb on + strand, within CA264_13930 at 3252.965 kb on + strand, within CA264_13930 at 3252.983 kb on + strand, within CA264_13930 at 3253.024 kb on - strand, within CA264_13930 at 3253.024 kb on - strand, within CA264_13930 at 3253.034 kb on + strand, within CA264_13930 at 3253.034 kb on + strand, within CA264_13930 at 3253.040 kb on + strand, within CA264_13930 at 3253.040 kb on + strand, within CA264_13930 at 3253.041 kb on - strand, within CA264_13930 at 3253.041 kb on - strand, within CA264_13930 at 3253.044 kb on - strand, within CA264_13930 at 3253.078 kb on + strand, within CA264_13930 at 3253.078 kb on + strand, within CA264_13930 at 3253.079 kb on - strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.084 kb on - strand, within CA264_13930 at 3253.084 kb on - strand, within CA264_13930 at 3253.085 kb on + strand, within CA264_13930 at 3253.085 kb on + strand, within CA264_13930 at 3253.086 kb on - strand, within CA264_13930 at 3253.174 kb on - strand, within CA264_13930 at 3253.199 kb on + strand, within CA264_13930 at 3253.200 kb on - strand, within CA264_13930 at 3253.203 kb on + strand, within CA264_13930 at 3253.203 kb on + strand, within CA264_13930 at 3253.204 kb on - strand, within CA264_13930 at 3253.292 kb on - strand, within CA264_13930 at 3253.292 kb on - strand, within CA264_13930 at 3253.381 kb on + strand, within CA264_13930 at 3253.381 kb on + strand, within CA264_13930 at 3253.397 kb on + strand, within CA264_13930 at 3253.404 kb on - strand, within CA264_13930 at 3253.446 kb on - strand, within CA264_13930 at 3253.471 kb on - strand, within CA264_13930 at 3253.471 kb on - strand, within CA264_13930 at 3253.541 kb on - strand at 3253.602 kb on + strand at 3253.603 kb on - strand at 3253.608 kb on + strand at 3253.608 kb on + strand at 3253.608 kb on + strand at 3253.609 kb on - strand at 3253.611 kb on - strand at 3253.618 kb on - strand at 3253.618 kb on - strand at 3253.620 kb on + strand at 3253.621 kb on - strand at 3253.651 kb on + strand at 3253.651 kb on + strand at 3253.651 kb on + strand at 3253.652 kb on - strand at 3253.657 kb on + strand at 3253.658 kb on - strand at 3253.692 kb on + strand at 3253.712 kb on - strand at 3253.749 kb on + strand at 3253.749 kb on + strand at 3253.749 kb on + strand at 3253.750 kb on - strand at 3253.750 kb on - strand at 3253.817 kb on - strand, within CA264_13935 at 3253.817 kb on - strand, within CA264_13935 at 3253.824 kb on - strand, within CA264_13935 at 3253.824 kb on - strand, within CA264_13935 at 3253.892 kb on + strand, within CA264_13935 at 3254.010 kb on + strand, within CA264_13935 at 3254.013 kb on + strand, within CA264_13935 at 3254.013 kb on + strand, within CA264_13935 at 3254.014 kb on - strand, within CA264_13935 at 3254.014 kb on - strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.042 kb on - strand, within CA264_13935 at 3254.042 kb on - strand, within CA264_13935 at 3254.071 kb on + strand, within CA264_13935 at 3254.102 kb on + strand, within CA264_13935 at 3254.137 kb on + strand, within CA264_13935 at 3254.170 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.255 kb on - strand, within CA264_13935 at 3254.340 kb on + strand, within CA264_13935 at 3254.346 kb on + strand, within CA264_13935 at 3254.347 kb on - strand, within CA264_13935 at 3254.399 kb on - strand, within CA264_13935 at 3254.434 kb on - strand, within CA264_13935 at 3254.451 kb on + strand, within CA264_13935 at 3254.593 kb on + strand, within CA264_13935 at 3254.594 kb on - strand, within CA264_13935 at 3254.669 kb on + strand, within CA264_13935 at 3254.670 kb on - strand, within CA264_13935 at 3254.670 kb on - strand, within CA264_13935 at 3254.676 kb on + strand, within CA264_13935 at 3254.679 kb on + strand, within CA264_13935 at 3254.680 kb on - strand, within CA264_13935 at 3254.680 kb on - strand, within CA264_13935 at 3254.694 kb on + strand, within CA264_13935 at 3254.694 kb on + strand, within CA264_13935 at 3254.694 kb on + strand, within CA264_13935 at 3254.694 kb on + strand, within CA264_13935 at 3254.695 kb on - strand, within CA264_13935 at 3254.695 kb on - strand, within CA264_13935 at 3254.695 kb on - strand, within CA264_13935 at 3254.695 kb on - strand, within CA264_13935 at 3254.695 kb on - strand, within CA264_13935 at 3254.697 kb on - strand, within CA264_13935 at 3254.697 kb on - strand, within CA264_13935 at 3254.738 kb on + strand, within CA264_13935 at 3254.738 kb on + strand, within CA264_13935 at 3254.739 kb on - strand, within CA264_13935 at 3254.750 kb on + strand, within CA264_13935 at 3254.771 kb on + strand, within CA264_13935 at 3254.789 kb on - strand, within CA264_13935 at 3254.816 kb on - strand, within CA264_13935 at 3254.816 kb on - strand, within CA264_13935 at 3254.872 kb on - strand, within CA264_13935 at 3254.872 kb on - strand, within CA264_13935 at 3254.909 kb on + strand, within CA264_13935 at 3255.015 kb on + strand, within CA264_13935 at 3255.015 kb on + strand, within CA264_13935 at 3255.155 kb on - strand, within CA264_13935 at 3255.195 kb on + strand at 3255.214 kb on + strand at 3255.218 kb on + strand at 3255.219 kb on - strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.220 kb on + strand at 3255.221 kb on - strand at 3255.221 kb on - strand at 3255.221 kb on - strand at 3255.221 kb on - strand at 3255.234 kb on + strand at 3255.368 kb on - strand at 3255.369 kb on + strand at 3255.394 kb on + strand at 3255.394 kb on + strand at 3255.395 kb on - strand at 3255.395 kb on - strand at 3255.448 kb on + strand at 3255.449 kb on - strand at 3255.452 kb on + strand at 3255.452 kb on + strand at 3255.452 kb on + strand at 3255.453 kb on - strand at 3255.525 kb on + strand at 3255.525 kb on + strand at 3255.526 kb on - strand at 3255.581 kb on + strand at 3255.582 kb on - strand at 3255.691 kb on + strand, within CA264_13940 at 3255.691 kb on + strand, within CA264_13940 at 3255.691 kb on + strand, within CA264_13940 at 3255.692 kb on - strand, within CA264_13940 at 3255.692 kb on - strand, within CA264_13940 at 3255.696 kb on - strand, within CA264_13940 at 3255.714 kb on + strand, within CA264_13940 at 3255.727 kb on - strand, within CA264_13940 at 3255.758 kb on - strand, within CA264_13940 at 3255.880 kb on - strand, within CA264_13940 at 3255.880 kb on - strand, within CA264_13940 at 3255.912 kb on + strand, within CA264_13940 at 3255.913 kb on - strand, within CA264_13940 at 3255.916 kb on + strand, within CA264_13940 at 3255.917 kb on - strand, within CA264_13940 at 3255.931 kb on - strand, within CA264_13940 at 3255.979 kb on - strand, within CA264_13940 at 3255.979 kb on - strand, within CA264_13940 at 3255.987 kb on + strand, within CA264_13940 at 3256.019 kb on + strand, within CA264_13940 at 3256.020 kb on - strand, within CA264_13940 at 3256.022 kb on + strand, within CA264_13940 at 3256.143 kb on + strand, within CA264_13940 at 3256.144 kb on - strand, within CA264_13940 at 3256.150 kb on + strand, within CA264_13940 at 3256.150 kb on + strand, within CA264_13940 at 3256.151 kb on - strand, within CA264_13940 at 3256.151 kb on - strand, within CA264_13940 at 3256.154 kb on + strand, within CA264_13940 at 3256.190 kb on - strand, within CA264_13940 at 3256.192 kb on + strand, within CA264_13940 at 3256.215 kb on + strand, within CA264_13940 at 3256.272 kb on + strand, within CA264_13940 at 3256.272 kb on + strand, within CA264_13940 at 3256.273 kb on - strand, within CA264_13940 at 3256.329 kb on + strand, within CA264_13940 at 3256.330 kb on - strand, within CA264_13940 at 3256.358 kb on + strand, within CA264_13940 at 3256.358 kb on + strand, within CA264_13940 at 3256.358 kb on + strand, within CA264_13940 at 3256.359 kb on - strand, within CA264_13940 at 3256.359 kb on - strand, within CA264_13940 at 3256.360 kb on + strand, within CA264_13940 at 3256.360 kb on + strand, within CA264_13940
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,252,636 + CA264_13930 0.13 -0.2 3,252,636 + CA264_13930 0.13 -1.1 3,252,636 + CA264_13930 0.13 +1.0 3,252,636 + CA264_13930 0.13 +0.7 3,252,637 - CA264_13930 0.13 -0.4 3,252,637 - CA264_13930 0.13 -0.1 3,252,695 - CA264_13930 0.18 +0.1 3,252,770 + CA264_13930 0.25 -0.4 3,252,779 + CA264_13930 0.26 -0.1 3,252,779 + CA264_13930 0.26 +0.5 3,252,783 - CA264_13930 0.26 +0.1 3,252,794 + CA264_13930 0.27 -0.2 3,252,794 + CA264_13930 0.27 +0.9 3,252,794 + CA264_13930 0.27 -0.7 3,252,795 - CA264_13930 0.27 +0.1 3,252,798 + CA264_13930 0.27 +0.6 3,252,798 + CA264_13930 0.27 +0.0 3,252,798 + CA264_13930 0.27 -0.5 3,252,798 + CA264_13930 0.27 +0.3 3,252,855 + CA264_13930 0.33 -0.4 3,252,864 + CA264_13930 0.33 -0.7 3,252,864 + CA264_13930 0.33 -0.0 3,252,869 - CA264_13930 0.34 +0.6 3,252,933 + CA264_13930 0.40 -3.5 3,252,965 + CA264_13930 0.42 -1.6 3,252,983 + CA264_13930 0.44 -1.4 3,253,024 - CA264_13930 0.48 +0.2 3,253,024 - CA264_13930 0.48 -0.4 3,253,034 + CA264_13930 0.49 +0.3 3,253,034 + CA264_13930 0.49 +0.6 3,253,040 + CA264_13930 0.49 -1.1 3,253,040 + CA264_13930 0.49 -0.7 3,253,041 - CA264_13930 0.49 -1.3 3,253,041 - CA264_13930 0.49 +0.0 3,253,044 - CA264_13930 0.50 +0.2 3,253,078 + CA264_13930 0.53 -0.8 3,253,078 + CA264_13930 0.53 +0.2 3,253,079 - CA264_13930 0.53 -0.0 3,253,083 + CA264_13930 0.53 -0.7 3,253,083 + CA264_13930 0.53 +0.8 3,253,083 + CA264_13930 0.53 +0.5 3,253,084 - CA264_13930 0.53 +0.2 3,253,084 - CA264_13930 0.53 -0.4 3,253,085 + CA264_13930 0.53 +0.2 3,253,085 + CA264_13930 0.53 +1.0 3,253,086 - CA264_13930 0.53 +0.2 3,253,174 - CA264_13930 0.61 -0.4 3,253,199 + CA264_13930 0.64 +0.6 3,253,200 - CA264_13930 0.64 -0.2 3,253,203 + CA264_13930 0.64 -2.4 3,253,203 + CA264_13930 0.64 -1.6 3,253,204 - CA264_13930 0.64 -0.5 3,253,292 - CA264_13930 0.72 -0.8 3,253,292 - CA264_13930 0.72 -0.6 3,253,381 + CA264_13930 0.80 +0.3 3,253,381 + CA264_13930 0.80 -0.2 3,253,397 + CA264_13930 0.82 +0.0 3,253,404 - CA264_13930 0.82 -0.8 3,253,446 - CA264_13930 0.86 -0.7 3,253,471 - CA264_13930 0.88 +2.0 3,253,471 - CA264_13930 0.88 +0.7 3,253,541 - -0.8 3,253,602 + +0.8 3,253,603 - +0.3 3,253,608 + -0.6 3,253,608 + -2.1 3,253,608 + +0.1 3,253,609 - +0.5 3,253,611 - +0.1 3,253,618 - +0.1 3,253,618 - -0.6 3,253,620 + -0.1 3,253,621 - +2.3 3,253,651 + +0.8 3,253,651 + -0.1 3,253,651 + -1.2 3,253,652 - -0.4 3,253,657 + +0.3 3,253,658 - +0.5 3,253,692 + -0.5 3,253,712 - -1.4 3,253,749 + -0.2 3,253,749 + -0.8 3,253,749 + +0.2 3,253,750 - -1.9 3,253,750 - -1.9 3,253,817 - CA264_13935 0.11 +0.3 3,253,817 - CA264_13935 0.11 -2.5 3,253,824 - CA264_13935 0.11 -0.2 3,253,824 - CA264_13935 0.11 -1.8 3,253,892 + CA264_13935 0.15 +0.7 3,254,010 + CA264_13935 0.22 -0.5 3,254,013 + CA264_13935 0.22 -0.1 3,254,013 + CA264_13935 0.22 -0.5 3,254,014 - CA264_13935 0.22 +0.0 3,254,014 - CA264_13935 0.22 -1.2 3,254,039 + CA264_13935 0.23 -0.4 3,254,039 + CA264_13935 0.23 -1.7 3,254,039 + CA264_13935 0.23 +0.6 3,254,039 + CA264_13935 0.23 -0.0 3,254,042 - CA264_13935 0.24 -1.8 3,254,042 - CA264_13935 0.24 +0.6 3,254,071 + CA264_13935 0.25 -0.1 3,254,102 + CA264_13935 0.27 +0.6 3,254,137 + CA264_13935 0.29 -0.5 3,254,170 + CA264_13935 0.31 +1.2 3,254,254 + CA264_13935 0.36 +0.7 3,254,254 + CA264_13935 0.36 -1.7 3,254,254 + CA264_13935 0.36 +0.2 3,254,255 - CA264_13935 0.36 -0.2 3,254,340 + CA264_13935 0.41 +0.1 3,254,346 + CA264_13935 0.41 -0.4 3,254,347 - CA264_13935 0.41 -1.0 3,254,399 - CA264_13935 0.44 -0.3 3,254,434 - CA264_13935 0.46 -1.1 3,254,451 + CA264_13935 0.47 +0.9 3,254,593 + CA264_13935 0.55 -0.9 3,254,594 - CA264_13935 0.56 +0.3 3,254,669 + CA264_13935 0.60 -0.3 3,254,670 - CA264_13935 0.60 +0.2 3,254,670 - CA264_13935 0.60 -1.1 3,254,676 + CA264_13935 0.60 +0.8 3,254,679 + CA264_13935 0.60 +0.2 3,254,680 - CA264_13935 0.61 -0.1 3,254,680 - CA264_13935 0.61 +0.2 3,254,694 + CA264_13935 0.61 +0.3 3,254,694 + CA264_13935 0.61 +0.4 3,254,694 + CA264_13935 0.61 -0.8 3,254,694 + CA264_13935 0.61 +1.9 3,254,695 - CA264_13935 0.61 -0.6 3,254,695 - CA264_13935 0.61 +0.3 3,254,695 - CA264_13935 0.61 -1.0 3,254,695 - CA264_13935 0.61 -0.1 3,254,695 - CA264_13935 0.61 -0.4 3,254,697 - CA264_13935 0.62 -0.4 3,254,697 - CA264_13935 0.62 +0.1 3,254,738 + CA264_13935 0.64 -0.5 3,254,738 + CA264_13935 0.64 -0.3 3,254,739 - CA264_13935 0.64 -0.9 3,254,750 + CA264_13935 0.65 +0.0 3,254,771 + CA264_13935 0.66 -0.5 3,254,789 - CA264_13935 0.67 -0.7 3,254,816 - CA264_13935 0.68 -0.5 3,254,816 - CA264_13935 0.68 -0.6 3,254,872 - CA264_13935 0.72 -0.9 3,254,872 - CA264_13935 0.72 -2.1 3,254,909 + CA264_13935 0.74 +0.5 3,255,015 + CA264_13935 0.80 +0.1 3,255,015 + CA264_13935 0.80 +0.5 3,255,155 - CA264_13935 0.88 -1.0 3,255,195 + +0.0 3,255,214 + -0.1 3,255,218 + -0.2 3,255,219 - -1.2 3,255,220 + +0.6 3,255,220 + -0.5 3,255,220 + +1.3 3,255,220 + +0.6 3,255,220 + -0.2 3,255,220 + -0.5 3,255,220 + -0.2 3,255,220 + -0.3 3,255,220 + -0.1 3,255,221 - -0.3 3,255,221 - +0.1 3,255,221 - -0.8 3,255,221 - +0.7 3,255,234 + +0.6 3,255,368 - -0.1 3,255,369 + -0.9 3,255,394 + +1.8 3,255,394 + -0.1 3,255,395 - +1.6 3,255,395 - +0.1 3,255,448 + +0.0 3,255,449 - -1.1 3,255,452 + -0.6 3,255,452 + -0.4 3,255,452 + -1.6 3,255,453 - -2.1 3,255,525 + -0.1 3,255,525 + +0.3 3,255,526 - -1.3 3,255,581 + -0.7 3,255,582 - -0.3 3,255,691 + CA264_13940 0.10 -0.2 3,255,691 + CA264_13940 0.10 -0.8 3,255,691 + CA264_13940 0.10 -1.0 3,255,692 - CA264_13940 0.10 -1.1 3,255,692 - CA264_13940 0.10 -1.2 3,255,696 - CA264_13940 0.10 -0.9 3,255,714 + CA264_13940 0.11 +0.8 3,255,727 - CA264_13940 0.11 +1.8 3,255,758 - CA264_13940 0.12 -0.7 3,255,880 - CA264_13940 0.16 +0.3 3,255,880 - CA264_13940 0.16 -0.5 3,255,912 + CA264_13940 0.18 -2.0 3,255,913 - CA264_13940 0.18 -0.8 3,255,916 + CA264_13940 0.18 -0.7 3,255,917 - CA264_13940 0.18 -0.4 3,255,931 - CA264_13940 0.18 -1.2 3,255,979 - CA264_13940 0.20 -1.4 3,255,979 - CA264_13940 0.20 +0.0 3,255,987 + CA264_13940 0.20 -1.6 3,256,019 + CA264_13940 0.21 -0.3 3,256,020 - CA264_13940 0.21 -1.0 3,256,022 + CA264_13940 0.21 -0.3 3,256,143 + CA264_13940 0.25 -1.0 3,256,144 - CA264_13940 0.25 -1.3 3,256,150 + CA264_13940 0.26 +0.4 3,256,150 + CA264_13940 0.26 -1.7 3,256,151 - CA264_13940 0.26 -1.7 3,256,151 - CA264_13940 0.26 +0.2 3,256,154 + CA264_13940 0.26 +0.5 3,256,190 - CA264_13940 0.27 -0.1 3,256,192 + CA264_13940 0.27 -0.2 3,256,215 + CA264_13940 0.28 -0.7 3,256,272 + CA264_13940 0.30 -0.4 3,256,272 + CA264_13940 0.30 -2.7 3,256,273 - CA264_13940 0.30 +1.0 3,256,329 + CA264_13940 0.32 -0.3 3,256,330 - CA264_13940 0.32 -0.7 3,256,358 + CA264_13940 0.33 +0.1 3,256,358 + CA264_13940 0.33 -1.0 3,256,358 + CA264_13940 0.33 -0.4 3,256,359 - CA264_13940 0.33 -0.3 3,256,359 - CA264_13940 0.33 -0.0 3,256,360 + CA264_13940 0.33 -0.4 3,256,360 + CA264_13940 0.33 -0.2
Or see this region's nucleotide sequence