Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13925 and CA264_13930 are separated by 278 nucleotides CA264_13930 and CA264_13935 are separated by 34 nucleotides
CA264_13925: CA264_13925 - cytochrome c oxidase subunit I, at 3,250,397 to 3,252,217
_13925
CA264_13930: CA264_13930 - alpha-N-arabinofuranosidase, at 3,252,496 to 3,253,599
_13930
CA264_13935: CA264_13935 - glycoside hydrolase 43 family protein, at 3,253,634 to 3,255,361
_13935
Position (kb)
3252
3253
3254 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3251.599 kb on + strand, within CA264_13925 at 3251.599 kb on + strand, within CA264_13925 at 3251.600 kb on - strand, within CA264_13925 at 3251.600 kb on - strand, within CA264_13925 at 3251.602 kb on - strand, within CA264_13925 at 3251.602 kb on - strand, within CA264_13925 at 3251.602 kb on - strand, within CA264_13925 at 3251.602 kb on - strand, within CA264_13925 at 3251.771 kb on + strand, within CA264_13925 at 3251.771 kb on + strand, within CA264_13925 at 3252.094 kb on - strand at 3252.094 kb on - strand at 3252.186 kb on - strand at 3252.209 kb on - strand at 3252.234 kb on - strand at 3252.254 kb on + strand at 3252.287 kb on + strand at 3252.302 kb on - strand at 3252.363 kb on - strand at 3252.497 kb on + strand at 3252.526 kb on + strand at 3252.526 kb on + strand at 3252.527 kb on - strand at 3252.527 kb on - strand at 3252.553 kb on - strand at 3252.554 kb on + strand at 3252.569 kb on - strand at 3252.594 kb on + strand at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.636 kb on + strand, within CA264_13930 at 3252.637 kb on - strand, within CA264_13930 at 3252.637 kb on - strand, within CA264_13930 at 3252.695 kb on - strand, within CA264_13930 at 3252.770 kb on + strand, within CA264_13930 at 3252.779 kb on + strand, within CA264_13930 at 3252.779 kb on + strand, within CA264_13930 at 3252.783 kb on - strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.794 kb on + strand, within CA264_13930 at 3252.795 kb on - strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.798 kb on + strand, within CA264_13930 at 3252.855 kb on + strand, within CA264_13930 at 3252.864 kb on + strand, within CA264_13930 at 3252.864 kb on + strand, within CA264_13930 at 3252.869 kb on - strand, within CA264_13930 at 3252.933 kb on + strand, within CA264_13930 at 3252.965 kb on + strand, within CA264_13930 at 3252.983 kb on + strand, within CA264_13930 at 3253.024 kb on - strand, within CA264_13930 at 3253.024 kb on - strand, within CA264_13930 at 3253.034 kb on + strand, within CA264_13930 at 3253.034 kb on + strand, within CA264_13930 at 3253.040 kb on + strand, within CA264_13930 at 3253.040 kb on + strand, within CA264_13930 at 3253.041 kb on - strand, within CA264_13930 at 3253.041 kb on - strand, within CA264_13930 at 3253.044 kb on - strand, within CA264_13930 at 3253.078 kb on + strand, within CA264_13930 at 3253.078 kb on + strand, within CA264_13930 at 3253.079 kb on - strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.083 kb on + strand, within CA264_13930 at 3253.084 kb on - strand, within CA264_13930 at 3253.084 kb on - strand, within CA264_13930 at 3253.085 kb on + strand, within CA264_13930 at 3253.085 kb on + strand, within CA264_13930 at 3253.086 kb on - strand, within CA264_13930 at 3253.174 kb on - strand, within CA264_13930 at 3253.199 kb on + strand, within CA264_13930 at 3253.200 kb on - strand, within CA264_13930 at 3253.203 kb on + strand, within CA264_13930 at 3253.203 kb on + strand, within CA264_13930 at 3253.204 kb on - strand, within CA264_13930 at 3253.292 kb on - strand, within CA264_13930 at 3253.292 kb on - strand, within CA264_13930 at 3253.381 kb on + strand, within CA264_13930 at 3253.381 kb on + strand, within CA264_13930 at 3253.397 kb on + strand, within CA264_13930 at 3253.404 kb on - strand, within CA264_13930 at 3253.446 kb on - strand, within CA264_13930 at 3253.471 kb on - strand, within CA264_13930 at 3253.471 kb on - strand, within CA264_13930 at 3253.541 kb on - strand at 3253.602 kb on + strand at 3253.603 kb on - strand at 3253.608 kb on + strand at 3253.608 kb on + strand at 3253.608 kb on + strand at 3253.609 kb on - strand at 3253.611 kb on - strand at 3253.618 kb on - strand at 3253.618 kb on - strand at 3253.620 kb on + strand at 3253.621 kb on - strand at 3253.651 kb on + strand at 3253.651 kb on + strand at 3253.651 kb on + strand at 3253.652 kb on - strand at 3253.657 kb on + strand at 3253.658 kb on - strand at 3253.692 kb on + strand at 3253.712 kb on - strand at 3253.749 kb on + strand at 3253.749 kb on + strand at 3253.749 kb on + strand at 3253.750 kb on - strand at 3253.750 kb on - strand at 3253.817 kb on - strand, within CA264_13935 at 3253.817 kb on - strand, within CA264_13935 at 3253.824 kb on - strand, within CA264_13935 at 3253.824 kb on - strand, within CA264_13935 at 3253.892 kb on + strand, within CA264_13935 at 3254.010 kb on + strand, within CA264_13935 at 3254.013 kb on + strand, within CA264_13935 at 3254.013 kb on + strand, within CA264_13935 at 3254.014 kb on - strand, within CA264_13935 at 3254.014 kb on - strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.039 kb on + strand, within CA264_13935 at 3254.042 kb on - strand, within CA264_13935 at 3254.042 kb on - strand, within CA264_13935 at 3254.071 kb on + strand, within CA264_13935 at 3254.102 kb on + strand, within CA264_13935 at 3254.137 kb on + strand, within CA264_13935 at 3254.170 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.254 kb on + strand, within CA264_13935 at 3254.255 kb on - strand, within CA264_13935 at 3254.340 kb on + strand, within CA264_13935 at 3254.346 kb on + strand, within CA264_13935 at 3254.347 kb on - strand, within CA264_13935 at 3254.399 kb on - strand, within CA264_13935 at 3254.434 kb on - strand, within CA264_13935 at 3254.451 kb on + strand, within CA264_13935 at 3254.593 kb on + strand, within CA264_13935 at 3254.594 kb on - strand, within CA264_13935
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,251,599 + CA264_13925 0.66 -0.8 3,251,599 + CA264_13925 0.66 +0.4 3,251,600 - CA264_13925 0.66 -0.0 3,251,600 - CA264_13925 0.66 -1.0 3,251,602 - CA264_13925 0.66 -0.2 3,251,602 - CA264_13925 0.66 -0.4 3,251,602 - CA264_13925 0.66 +0.2 3,251,602 - CA264_13925 0.66 -0.6 3,251,771 + CA264_13925 0.75 -1.6 3,251,771 + CA264_13925 0.75 -0.4 3,252,094 - +0.3 3,252,094 - -0.7 3,252,186 - +0.3 3,252,209 - -0.9 3,252,234 - +0.1 3,252,254 + +1.5 3,252,287 + -0.8 3,252,302 - -0.6 3,252,363 - -0.2 3,252,497 + +1.8 3,252,526 + -0.2 3,252,526 + +1.0 3,252,527 - +0.1 3,252,527 - -1.0 3,252,553 - -0.2 3,252,554 + -0.4 3,252,569 - -2.1 3,252,594 + +1.2 3,252,636 + CA264_13930 0.13 -0.2 3,252,636 + CA264_13930 0.13 -1.1 3,252,636 + CA264_13930 0.13 +1.0 3,252,636 + CA264_13930 0.13 +0.7 3,252,637 - CA264_13930 0.13 -0.4 3,252,637 - CA264_13930 0.13 -0.1 3,252,695 - CA264_13930 0.18 +0.1 3,252,770 + CA264_13930 0.25 -0.4 3,252,779 + CA264_13930 0.26 -0.1 3,252,779 + CA264_13930 0.26 +0.5 3,252,783 - CA264_13930 0.26 +0.1 3,252,794 + CA264_13930 0.27 -0.2 3,252,794 + CA264_13930 0.27 +0.9 3,252,794 + CA264_13930 0.27 -0.7 3,252,795 - CA264_13930 0.27 +0.1 3,252,798 + CA264_13930 0.27 +0.6 3,252,798 + CA264_13930 0.27 +0.0 3,252,798 + CA264_13930 0.27 -0.5 3,252,798 + CA264_13930 0.27 +0.3 3,252,855 + CA264_13930 0.33 -0.4 3,252,864 + CA264_13930 0.33 -0.7 3,252,864 + CA264_13930 0.33 -0.0 3,252,869 - CA264_13930 0.34 +0.6 3,252,933 + CA264_13930 0.40 -3.5 3,252,965 + CA264_13930 0.42 -1.6 3,252,983 + CA264_13930 0.44 -1.4 3,253,024 - CA264_13930 0.48 +0.2 3,253,024 - CA264_13930 0.48 -0.4 3,253,034 + CA264_13930 0.49 +0.3 3,253,034 + CA264_13930 0.49 +0.6 3,253,040 + CA264_13930 0.49 -1.1 3,253,040 + CA264_13930 0.49 -0.7 3,253,041 - CA264_13930 0.49 -1.3 3,253,041 - CA264_13930 0.49 +0.0 3,253,044 - CA264_13930 0.50 +0.2 3,253,078 + CA264_13930 0.53 -0.8 3,253,078 + CA264_13930 0.53 +0.2 3,253,079 - CA264_13930 0.53 -0.0 3,253,083 + CA264_13930 0.53 -0.7 3,253,083 + CA264_13930 0.53 +0.8 3,253,083 + CA264_13930 0.53 +0.5 3,253,084 - CA264_13930 0.53 +0.2 3,253,084 - CA264_13930 0.53 -0.4 3,253,085 + CA264_13930 0.53 +0.2 3,253,085 + CA264_13930 0.53 +1.0 3,253,086 - CA264_13930 0.53 +0.2 3,253,174 - CA264_13930 0.61 -0.4 3,253,199 + CA264_13930 0.64 +0.6 3,253,200 - CA264_13930 0.64 -0.2 3,253,203 + CA264_13930 0.64 -2.4 3,253,203 + CA264_13930 0.64 -1.6 3,253,204 - CA264_13930 0.64 -0.5 3,253,292 - CA264_13930 0.72 -0.8 3,253,292 - CA264_13930 0.72 -0.6 3,253,381 + CA264_13930 0.80 +0.3 3,253,381 + CA264_13930 0.80 -0.2 3,253,397 + CA264_13930 0.82 +0.0 3,253,404 - CA264_13930 0.82 -0.8 3,253,446 - CA264_13930 0.86 -0.7 3,253,471 - CA264_13930 0.88 +2.0 3,253,471 - CA264_13930 0.88 +0.7 3,253,541 - -0.8 3,253,602 + +0.8 3,253,603 - +0.3 3,253,608 + -0.6 3,253,608 + -2.1 3,253,608 + +0.1 3,253,609 - +0.5 3,253,611 - +0.1 3,253,618 - +0.1 3,253,618 - -0.6 3,253,620 + -0.1 3,253,621 - +2.3 3,253,651 + +0.8 3,253,651 + -0.1 3,253,651 + -1.2 3,253,652 - -0.4 3,253,657 + +0.3 3,253,658 - +0.5 3,253,692 + -0.5 3,253,712 - -1.4 3,253,749 + -0.2 3,253,749 + -0.8 3,253,749 + +0.2 3,253,750 - -1.9 3,253,750 - -1.9 3,253,817 - CA264_13935 0.11 +0.3 3,253,817 - CA264_13935 0.11 -2.5 3,253,824 - CA264_13935 0.11 -0.2 3,253,824 - CA264_13935 0.11 -1.8 3,253,892 + CA264_13935 0.15 +0.7 3,254,010 + CA264_13935 0.22 -0.5 3,254,013 + CA264_13935 0.22 -0.1 3,254,013 + CA264_13935 0.22 -0.5 3,254,014 - CA264_13935 0.22 +0.0 3,254,014 - CA264_13935 0.22 -1.2 3,254,039 + CA264_13935 0.23 -0.4 3,254,039 + CA264_13935 0.23 -1.7 3,254,039 + CA264_13935 0.23 +0.6 3,254,039 + CA264_13935 0.23 -0.0 3,254,042 - CA264_13935 0.24 -1.8 3,254,042 - CA264_13935 0.24 +0.6 3,254,071 + CA264_13935 0.25 -0.1 3,254,102 + CA264_13935 0.27 +0.6 3,254,137 + CA264_13935 0.29 -0.5 3,254,170 + CA264_13935 0.31 +1.2 3,254,254 + CA264_13935 0.36 +0.7 3,254,254 + CA264_13935 0.36 -1.7 3,254,254 + CA264_13935 0.36 +0.2 3,254,255 - CA264_13935 0.36 -0.2 3,254,340 + CA264_13935 0.41 +0.1 3,254,346 + CA264_13935 0.41 -0.4 3,254,347 - CA264_13935 0.41 -1.0 3,254,399 - CA264_13935 0.44 -0.3 3,254,434 - CA264_13935 0.46 -1.1 3,254,451 + CA264_13935 0.47 +0.9 3,254,593 + CA264_13935 0.55 -0.9 3,254,594 - CA264_13935 0.56 +0.3
Or see this region's nucleotide sequence