Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13515 and CA264_13520 are separated by 59 nucleotides CA264_13520 and CA264_13525 are separated by 211 nucleotides CA264_13525 and CA264_13530 are separated by 237 nucleotides
CA264_13515: CA264_13515 - glyoxalase/bleomycin resistance/dioxygenase family protein, at 3,156,717 to 3,157,139
_13515
CA264_13520: CA264_13520 - thioredoxin family protein, at 3,157,199 to 3,157,843
_13520
CA264_13525: CA264_13525 - NAD-dependent dehydratase, at 3,158,055 to 3,159,008
_13525
CA264_13530: CA264_13530 - hypothetical protein, at 3,159,246 to 3,160,175
_13530
Position (kb)
3158
3159
3160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3157.078 kb on + strand, within CA264_13515 at 3157.085 kb on - strand, within CA264_13515 at 3157.085 kb on - strand, within CA264_13515 at 3157.138 kb on - strand at 3157.175 kb on + strand at 3157.181 kb on + strand at 3157.181 kb on + strand at 3157.267 kb on + strand, within CA264_13520 at 3157.267 kb on + strand, within CA264_13520 at 3157.476 kb on + strand, within CA264_13520 at 3157.477 kb on - strand, within CA264_13520 at 3157.520 kb on + strand, within CA264_13520 at 3157.613 kb on + strand, within CA264_13520 at 3157.708 kb on + strand, within CA264_13520 at 3157.709 kb on - strand, within CA264_13520 at 3157.710 kb on + strand, within CA264_13520 at 3157.710 kb on + strand, within CA264_13520 at 3157.715 kb on + strand, within CA264_13520 at 3157.715 kb on + strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.716 kb on - strand, within CA264_13520 at 3157.880 kb on + strand at 3157.885 kb on + strand at 3157.886 kb on - strand at 3157.896 kb on + strand at 3157.896 kb on + strand at 3157.896 kb on + strand at 3157.899 kb on + strand at 3158.015 kb on + strand at 3158.034 kb on + strand at 3158.034 kb on + strand at 3158.102 kb on + strand at 3158.103 kb on - strand at 3158.104 kb on + strand at 3158.104 kb on + strand at 3158.105 kb on - strand at 3158.296 kb on - strand, within CA264_13525 at 3158.321 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.578 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.685 kb on + strand, within CA264_13525 at 3158.686 kb on - strand, within CA264_13525 at 3158.686 kb on - strand, within CA264_13525 at 3158.719 kb on - strand, within CA264_13525 at 3158.729 kb on + strand, within CA264_13525 at 3158.811 kb on - strand, within CA264_13525 at 3158.816 kb on - strand, within CA264_13525 at 3158.886 kb on + strand, within CA264_13525 at 3158.886 kb on + strand, within CA264_13525 at 3158.887 kb on - strand, within CA264_13525 at 3158.912 kb on - strand, within CA264_13525 at 3159.020 kb on + strand at 3159.037 kb on + strand at 3159.042 kb on - strand at 3159.070 kb on + strand at 3159.104 kb on + strand at 3159.131 kb on - strand at 3159.135 kb on + strand at 3159.136 kb on - strand at 3159.140 kb on + strand at 3159.141 kb on - strand at 3159.148 kb on + strand at 3159.166 kb on + strand at 3159.171 kb on + strand at 3159.195 kb on + strand at 3159.207 kb on - strand at 3159.220 kb on - strand at 3159.220 kb on - strand at 3159.225 kb on + strand at 3159.225 kb on + strand at 3159.248 kb on - strand at 3159.273 kb on - strand at 3159.329 kb on + strand at 3159.359 kb on + strand, within CA264_13530 at 3159.369 kb on - strand, within CA264_13530 at 3159.403 kb on + strand, within CA264_13530 at 3159.404 kb on - strand, within CA264_13530 at 3159.404 kb on - strand, within CA264_13530 at 3159.572 kb on + strand, within CA264_13530 at 3159.651 kb on + strand, within CA264_13530 at 3159.651 kb on + strand, within CA264_13530 at 3159.652 kb on - strand, within CA264_13530 at 3159.654 kb on - strand, within CA264_13530 at 3159.698 kb on + strand, within CA264_13530 at 3159.706 kb on + strand, within CA264_13530 at 3159.707 kb on - strand, within CA264_13530 at 3159.710 kb on + strand, within CA264_13530 at 3159.729 kb on + strand, within CA264_13530 at 3159.784 kb on + strand, within CA264_13530 at 3159.874 kb on - strand, within CA264_13530 at 3159.875 kb on + strand, within CA264_13530 at 3159.881 kb on + strand, within CA264_13530 at 3159.947 kb on + strand, within CA264_13530 at 3159.996 kb on - strand, within CA264_13530
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,157,078 + CA264_13515 0.85 +1.0 3,157,085 - CA264_13515 0.87 -0.9 3,157,085 - CA264_13515 0.87 -0.7 3,157,138 - -0.2 3,157,175 + +0.1 3,157,181 + -1.3 3,157,181 + -0.5 3,157,267 + CA264_13520 0.11 -0.5 3,157,267 + CA264_13520 0.11 +0.4 3,157,476 + CA264_13520 0.43 -0.9 3,157,477 - CA264_13520 0.43 -0.7 3,157,520 + CA264_13520 0.50 -0.3 3,157,613 + CA264_13520 0.64 -0.0 3,157,708 + CA264_13520 0.79 +1.7 3,157,709 - CA264_13520 0.79 -1.4 3,157,710 + CA264_13520 0.79 -0.2 3,157,710 + CA264_13520 0.79 -0.2 3,157,715 + CA264_13520 0.80 +0.8 3,157,715 + CA264_13520 0.80 +0.2 3,157,716 - CA264_13520 0.80 -0.9 3,157,716 - CA264_13520 0.80 -1.5 3,157,716 - CA264_13520 0.80 +2.1 3,157,716 - CA264_13520 0.80 +0.7 3,157,880 + +0.1 3,157,885 + -0.4 3,157,886 - +0.1 3,157,896 + -0.8 3,157,896 + -0.3 3,157,896 + +0.7 3,157,899 + +0.1 3,158,015 + -1.0 3,158,034 + -0.8 3,158,034 + -1.2 3,158,102 + -1.3 3,158,103 - -2.2 3,158,104 + -1.1 3,158,104 + -0.8 3,158,105 - -1.9 3,158,296 - CA264_13525 0.25 -0.7 3,158,321 + CA264_13525 0.28 -0.9 3,158,578 + CA264_13525 0.55 -1.3 3,158,578 + CA264_13525 0.55 -0.8 3,158,578 + CA264_13525 0.55 -0.8 3,158,685 + CA264_13525 0.66 -0.7 3,158,685 + CA264_13525 0.66 +0.3 3,158,685 + CA264_13525 0.66 +0.1 3,158,685 + CA264_13525 0.66 +0.2 3,158,685 + CA264_13525 0.66 -0.0 3,158,686 - CA264_13525 0.66 -0.6 3,158,686 - CA264_13525 0.66 +0.3 3,158,719 - CA264_13525 0.70 -0.2 3,158,729 + CA264_13525 0.71 -0.2 3,158,811 - CA264_13525 0.79 -1.9 3,158,816 - CA264_13525 0.80 -0.5 3,158,886 + CA264_13525 0.87 +0.9 3,158,886 + CA264_13525 0.87 -0.2 3,158,887 - CA264_13525 0.87 -0.5 3,158,912 - CA264_13525 0.90 -1.5 3,159,020 + -2.2 3,159,037 + -0.2 3,159,042 - -1.0 3,159,070 + -1.0 3,159,104 + +0.9 3,159,131 - -0.1 3,159,135 + +0.3 3,159,136 - -1.7 3,159,140 + -0.2 3,159,141 - -0.3 3,159,148 + -1.8 3,159,166 + +0.1 3,159,171 + -0.3 3,159,195 + -0.4 3,159,207 - -1.2 3,159,220 - -0.5 3,159,220 - -1.0 3,159,225 + -1.1 3,159,225 + +0.2 3,159,248 - -1.8 3,159,273 - -0.5 3,159,329 + -0.1 3,159,359 + CA264_13530 0.12 -0.5 3,159,369 - CA264_13530 0.13 +0.1 3,159,403 + CA264_13530 0.17 -0.2 3,159,404 - CA264_13530 0.17 -0.1 3,159,404 - CA264_13530 0.17 -1.0 3,159,572 + CA264_13530 0.35 -0.4 3,159,651 + CA264_13530 0.44 +0.2 3,159,651 + CA264_13530 0.44 +0.1 3,159,652 - CA264_13530 0.44 -0.7 3,159,654 - CA264_13530 0.44 +0.2 3,159,698 + CA264_13530 0.49 -0.7 3,159,706 + CA264_13530 0.49 +0.5 3,159,707 - CA264_13530 0.50 +1.8 3,159,710 + CA264_13530 0.50 -0.0 3,159,729 + CA264_13530 0.52 +0.5 3,159,784 + CA264_13530 0.58 -0.2 3,159,874 - CA264_13530 0.68 -0.1 3,159,875 + CA264_13530 0.68 +0.8 3,159,881 + CA264_13530 0.68 -0.2 3,159,947 + CA264_13530 0.75 -0.6 3,159,996 - CA264_13530 0.81 +0.4
Or see this region's nucleotide sequence