Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13490 and CA264_13495 are separated by 168 nucleotides CA264_13495 and CA264_13500 are separated by 141 nucleotides CA264_13500 and CA264_13505 are separated by 22 nucleotides
CA264_13490: CA264_13490 - MFS transporter, at 3,150,644 to 3,151,825
_13490
CA264_13495: CA264_13495 - aldehyde dehydrogenase, at 3,151,994 to 3,153,457
_13495
CA264_13500: CA264_13500 - hypothetical protein, at 3,153,599 to 3,154,099
_13500
CA264_13505: CA264_13505 - hypothetical protein, at 3,154,122 to 3,154,676
_13505
Position (kb)
3151
3152
3153
3154 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3151.323 kb on + strand, within CA264_13490 at 3151.323 kb on + strand, within CA264_13490 at 3151.323 kb on + strand, within CA264_13490 at 3151.324 kb on - strand, within CA264_13490 at 3151.462 kb on - strand, within CA264_13490 at 3151.483 kb on + strand, within CA264_13490 at 3151.555 kb on + strand, within CA264_13490 at 3151.555 kb on + strand, within CA264_13490 at 3151.555 kb on + strand, within CA264_13490 at 3151.555 kb on + strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.556 kb on - strand, within CA264_13490 at 3151.565 kb on + strand, within CA264_13490 at 3151.689 kb on + strand, within CA264_13490 at 3151.690 kb on - strand, within CA264_13490 at 3151.712 kb on - strand at 3151.744 kb on + strand at 3151.800 kb on + strand at 3151.832 kb on + strand at 3151.904 kb on + strand at 3151.953 kb on + strand at 3151.985 kb on + strand at 3151.985 kb on + strand at 3151.989 kb on + strand at 3152.008 kb on + strand at 3152.008 kb on + strand at 3152.009 kb on - strand at 3152.101 kb on + strand at 3152.147 kb on + strand, within CA264_13495 at 3152.147 kb on + strand, within CA264_13495 at 3152.275 kb on + strand, within CA264_13495 at 3152.278 kb on - strand, within CA264_13495 at 3152.278 kb on - strand, within CA264_13495 at 3152.417 kb on + strand, within CA264_13495 at 3152.417 kb on + strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.418 kb on - strand, within CA264_13495 at 3152.419 kb on + strand, within CA264_13495 at 3152.419 kb on + strand, within CA264_13495 at 3152.420 kb on - strand, within CA264_13495 at 3152.420 kb on - strand, within CA264_13495 at 3152.461 kb on + strand, within CA264_13495 at 3152.477 kb on + strand, within CA264_13495 at 3153.023 kb on + strand, within CA264_13495 at 3153.024 kb on - strand, within CA264_13495 at 3153.024 kb on - strand, within CA264_13495 at 3153.072 kb on - strand, within CA264_13495 at 3153.191 kb on + strand, within CA264_13495 at 3153.192 kb on - strand, within CA264_13495 at 3153.303 kb on + strand, within CA264_13495 at 3153.303 kb on + strand, within CA264_13495 at 3153.304 kb on - strand, within CA264_13495 at 3153.426 kb on + strand at 3153.426 kb on + strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.427 kb on - strand at 3153.428 kb on + strand at 3153.446 kb on - strand at 3153.448 kb on - strand at 3153.448 kb on - strand at 3153.457 kb on + strand at 3153.457 kb on + strand at 3153.480 kb on + strand at 3153.490 kb on + strand at 3153.490 kb on + strand at 3153.491 kb on - strand at 3153.491 kb on - strand at 3153.491 kb on - strand at 3153.501 kb on + strand at 3153.502 kb on - strand at 3153.502 kb on - strand at 3153.505 kb on - strand at 3153.505 kb on - strand at 3153.508 kb on - strand at 3153.510 kb on - strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.515 kb on + strand at 3153.516 kb on - strand at 3153.516 kb on - strand at 3153.537 kb on - strand at 3153.537 kb on - strand at 3153.538 kb on + strand at 3153.538 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.588 kb on + strand at 3153.589 kb on - strand at 3153.589 kb on - strand at 3153.589 kb on - strand at 3153.593 kb on - strand at 3153.601 kb on - strand at 3153.760 kb on + strand, within CA264_13500 at 3153.761 kb on - strand, within CA264_13500 at 3153.886 kb on + strand, within CA264_13500 at 3153.910 kb on - strand, within CA264_13500 at 3153.915 kb on - strand, within CA264_13500 at 3153.980 kb on + strand, within CA264_13500 at 3153.980 kb on + strand, within CA264_13500 at 3153.981 kb on - strand, within CA264_13500 at 3153.986 kb on + strand, within CA264_13500 at 3153.987 kb on - strand, within CA264_13500 at 3153.987 kb on - strand, within CA264_13500 at 3154.008 kb on + strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.009 kb on - strand, within CA264_13500 at 3154.092 kb on - strand at 3154.092 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.099 kb on + strand at 3154.100 kb on - strand at 3154.108 kb on - strand at 3154.150 kb on - strand at 3154.161 kb on + strand at 3154.174 kb on - strand at 3154.316 kb on + strand, within CA264_13505 at 3154.317 kb on - strand, within CA264_13505
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 3,151,323 + CA264_13490 0.57 +0.6 3,151,323 + CA264_13490 0.57 +0.4 3,151,323 + CA264_13490 0.57 +0.9 3,151,324 - CA264_13490 0.58 -0.2 3,151,462 - CA264_13490 0.69 -1.3 3,151,483 + CA264_13490 0.71 -1.2 3,151,555 + CA264_13490 0.77 +0.1 3,151,555 + CA264_13490 0.77 -2.0 3,151,555 + CA264_13490 0.77 -0.1 3,151,555 + CA264_13490 0.77 +1.8 3,151,556 - CA264_13490 0.77 -0.4 3,151,556 - CA264_13490 0.77 +1.0 3,151,556 - CA264_13490 0.77 -0.3 3,151,556 - CA264_13490 0.77 -0.3 3,151,556 - CA264_13490 0.77 +0.3 3,151,556 - CA264_13490 0.77 -1.3 3,151,556 - CA264_13490 0.77 -1.0 3,151,565 + CA264_13490 0.78 -0.4 3,151,689 + CA264_13490 0.88 -1.2 3,151,690 - CA264_13490 0.88 +0.3 3,151,712 - -0.3 3,151,744 + +0.1 3,151,800 + +1.7 3,151,832 + +0.6 3,151,904 + -0.1 3,151,953 + -0.3 3,151,985 + -2.7 3,151,985 + -1.2 3,151,989 + -1.2 3,152,008 + -0.5 3,152,008 + +0.2 3,152,009 - -0.5 3,152,101 + +0.9 3,152,147 + CA264_13495 0.10 -0.7 3,152,147 + CA264_13495 0.10 +0.9 3,152,275 + CA264_13495 0.19 +1.2 3,152,278 - CA264_13495 0.19 -0.3 3,152,278 - CA264_13495 0.19 -1.2 3,152,417 + CA264_13495 0.29 -0.1 3,152,417 + CA264_13495 0.29 +0.8 3,152,418 - CA264_13495 0.29 -1.3 3,152,418 - CA264_13495 0.29 +1.1 3,152,418 - CA264_13495 0.29 -1.2 3,152,418 - CA264_13495 0.29 -1.0 3,152,418 - CA264_13495 0.29 -1.0 3,152,418 - CA264_13495 0.29 -0.6 3,152,419 + CA264_13495 0.29 -0.4 3,152,419 + CA264_13495 0.29 +0.2 3,152,420 - CA264_13495 0.29 -0.3 3,152,420 - CA264_13495 0.29 -0.5 3,152,461 + CA264_13495 0.32 +0.8 3,152,477 + CA264_13495 0.33 -0.9 3,153,023 + CA264_13495 0.70 -0.7 3,153,024 - CA264_13495 0.70 +0.3 3,153,024 - CA264_13495 0.70 -0.4 3,153,072 - CA264_13495 0.74 -0.9 3,153,191 + CA264_13495 0.82 -1.1 3,153,192 - CA264_13495 0.82 -0.7 3,153,303 + CA264_13495 0.89 -0.1 3,153,303 + CA264_13495 0.89 +1.3 3,153,304 - CA264_13495 0.89 -0.7 3,153,426 + +0.6 3,153,426 + -0.4 3,153,427 - -0.2 3,153,427 - -0.6 3,153,427 - -0.8 3,153,427 - -0.6 3,153,427 - -0.6 3,153,427 - -2.0 3,153,427 - +0.5 3,153,428 + -0.9 3,153,446 - +0.1 3,153,448 - -0.3 3,153,448 - -0.3 3,153,457 + -0.1 3,153,457 + -0.5 3,153,480 + -0.1 3,153,490 + +0.2 3,153,490 + -0.5 3,153,491 - -0.4 3,153,491 - -0.3 3,153,491 - +0.3 3,153,501 + +0.7 3,153,502 - -0.7 3,153,502 - -0.9 3,153,505 - -1.0 3,153,505 - +0.6 3,153,508 - -0.6 3,153,510 - -0.5 3,153,515 + -0.6 3,153,515 + +0.4 3,153,515 + -0.6 3,153,515 + -0.1 3,153,515 + +0.3 3,153,515 + -0.3 3,153,516 - -1.1 3,153,516 - +0.0 3,153,537 - +1.0 3,153,537 - -0.2 3,153,538 + -0.8 3,153,538 + +0.1 3,153,588 + -0.4 3,153,588 + -0.5 3,153,588 + +1.7 3,153,588 + +0.1 3,153,589 - +0.4 3,153,589 - -0.4 3,153,589 - -0.6 3,153,593 - -0.4 3,153,601 - +0.1 3,153,760 + CA264_13500 0.32 -0.1 3,153,761 - CA264_13500 0.32 -0.3 3,153,886 + CA264_13500 0.57 -0.2 3,153,910 - CA264_13500 0.62 +1.1 3,153,915 - CA264_13500 0.63 -1.3 3,153,980 + CA264_13500 0.76 -2.4 3,153,980 + CA264_13500 0.76 -0.1 3,153,981 - CA264_13500 0.76 -0.6 3,153,986 + CA264_13500 0.77 -0.1 3,153,987 - CA264_13500 0.77 -0.3 3,153,987 - CA264_13500 0.77 +0.2 3,154,008 + CA264_13500 0.82 -0.8 3,154,009 - CA264_13500 0.82 -0.4 3,154,009 - CA264_13500 0.82 -0.8 3,154,009 - CA264_13500 0.82 -1.4 3,154,092 - +1.3 3,154,092 - -2.4 3,154,096 - +0.6 3,154,096 - -0.1 3,154,096 - +0.6 3,154,096 - -0.7 3,154,099 + -0.2 3,154,099 + -0.0 3,154,099 + -0.0 3,154,099 + -0.2 3,154,100 - -0.5 3,154,108 - -1.9 3,154,150 - -1.1 3,154,161 + -0.6 3,154,174 - -0.7 3,154,316 + CA264_13505 0.35 -0.7 3,154,317 - CA264_13505 0.35 -0.7
Or see this region's nucleotide sequence