Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11425 and CA264_11430 are separated by 316 nucleotides CA264_11430 and CA264_11435 are separated by 17 nucleotides
CA264_11425: CA264_11425 - hydroxyacid dehydrogenase, at 2,647,671 to 2,648,672
_11425
CA264_11430: CA264_11430 - endonuclease, at 2,648,989 to 2,649,936
_11430
CA264_11435: CA264_11435 - FAD-dependent oxidoreductase, at 2,649,954 to 2,651,351
_11435
Position (kb)
2648
2649
2650 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2647.998 kb on - strand, within CA264_11425 at 2648.016 kb on - strand, within CA264_11425 at 2648.069 kb on + strand, within CA264_11425 at 2648.070 kb on - strand, within CA264_11425 at 2648.070 kb on - strand, within CA264_11425 at 2648.070 kb on - strand, within CA264_11425 at 2648.131 kb on + strand, within CA264_11425 at 2648.320 kb on - strand, within CA264_11425 at 2648.366 kb on + strand, within CA264_11425 at 2648.381 kb on + strand, within CA264_11425 at 2648.392 kb on - strand, within CA264_11425 at 2648.392 kb on - strand, within CA264_11425 at 2648.393 kb on + strand, within CA264_11425 at 2648.394 kb on - strand, within CA264_11425 at 2648.481 kb on + strand, within CA264_11425 at 2648.482 kb on - strand, within CA264_11425 at 2648.482 kb on - strand, within CA264_11425 at 2648.567 kb on - strand, within CA264_11425 at 2648.567 kb on - strand, within CA264_11425 at 2648.594 kb on + strand at 2648.594 kb on + strand at 2648.597 kb on - strand at 2648.597 kb on - strand at 2648.597 kb on - strand at 2648.599 kb on - strand at 2648.632 kb on - strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.688 kb on + strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.689 kb on - strand at 2648.695 kb on - strand at 2648.697 kb on + strand at 2648.697 kb on + strand at 2648.697 kb on + strand at 2648.697 kb on + strand at 2648.698 kb on - strand at 2648.698 kb on - strand at 2648.708 kb on - strand at 2648.708 kb on - strand at 2648.708 kb on - strand at 2648.711 kb on - strand at 2648.828 kb on + strand at 2648.828 kb on + strand at 2648.828 kb on + strand at 2648.831 kb on - strand at 2648.888 kb on - strand at 2648.909 kb on - strand at 2648.920 kb on - strand at 2648.922 kb on + strand at 2648.929 kb on + strand at 2648.930 kb on - strand at 2648.930 kb on - strand at 2648.959 kb on - strand at 2648.959 kb on - strand at 2648.960 kb on + strand at 2648.960 kb on + strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.961 kb on - strand at 2648.976 kb on - strand at 2648.990 kb on + strand at 2649.112 kb on + strand, within CA264_11430 at 2649.202 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.212 kb on + strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.213 kb on - strand, within CA264_11430 at 2649.249 kb on - strand, within CA264_11430 at 2649.299 kb on + strand, within CA264_11430 at 2649.341 kb on - strand, within CA264_11430 at 2649.431 kb on - strand, within CA264_11430 at 2649.483 kb on + strand, within CA264_11430 at 2649.506 kb on + strand, within CA264_11430 at 2649.575 kb on + strand, within CA264_11430 at 2649.681 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.685 kb on + strand, within CA264_11430 at 2649.686 kb on - strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.688 kb on + strand, within CA264_11430 at 2649.689 kb on - strand, within CA264_11430 at 2649.712 kb on + strand, within CA264_11430 at 2649.713 kb on - strand, within CA264_11430 at 2649.718 kb on + strand, within CA264_11430 at 2649.718 kb on + strand, within CA264_11430 at 2649.719 kb on - strand, within CA264_11430 at 2649.790 kb on - strand, within CA264_11430 at 2649.795 kb on + strand, within CA264_11430 at 2649.796 kb on - strand, within CA264_11430 at 2649.796 kb on - strand, within CA264_11430 at 2649.800 kb on - strand, within CA264_11430 at 2649.800 kb on - strand, within CA264_11430 at 2649.805 kb on - strand, within CA264_11430 at 2649.838 kb on - strand, within CA264_11430 at 2649.872 kb on - strand at 2649.936 kb on + strand at 2650.036 kb on - strand at 2650.106 kb on + strand, within CA264_11435 at 2650.106 kb on + strand, within CA264_11435 at 2650.137 kb on - strand, within CA264_11435 at 2650.137 kb on - strand, within CA264_11435 at 2650.161 kb on - strand, within CA264_11435 at 2650.222 kb on + strand, within CA264_11435 at 2650.223 kb on - strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.347 kb on + strand, within CA264_11435 at 2650.348 kb on - strand, within CA264_11435 at 2650.348 kb on - strand, within CA264_11435 at 2650.352 kb on - strand, within CA264_11435 at 2650.435 kb on + strand, within CA264_11435 at 2650.436 kb on - strand, within CA264_11435 at 2650.447 kb on + strand, within CA264_11435 at 2650.447 kb on + strand, within CA264_11435 at 2650.541 kb on + strand, within CA264_11435 at 2650.551 kb on + strand, within CA264_11435 at 2650.551 kb on + strand, within CA264_11435 at 2650.575 kb on - strand, within CA264_11435 at 2650.579 kb on - strand, within CA264_11435 at 2650.650 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.655 kb on + strand, within CA264_11435 at 2650.706 kb on - strand, within CA264_11435 at 2650.727 kb on + strand, within CA264_11435 at 2650.779 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.882 kb on - strand, within CA264_11435 at 2650.884 kb on - strand, within CA264_11435
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,647,998 - CA264_11425 0.33 -0.4 2,648,016 - CA264_11425 0.34 -1.6 2,648,069 + CA264_11425 0.40 -0.1 2,648,070 - CA264_11425 0.40 -0.2 2,648,070 - CA264_11425 0.40 -0.7 2,648,070 - CA264_11425 0.40 -1.1 2,648,131 + CA264_11425 0.46 -0.8 2,648,320 - CA264_11425 0.65 -2.7 2,648,366 + CA264_11425 0.69 -0.8 2,648,381 + CA264_11425 0.71 -1.4 2,648,392 - CA264_11425 0.72 -1.7 2,648,392 - CA264_11425 0.72 -0.3 2,648,393 + CA264_11425 0.72 -0.6 2,648,394 - CA264_11425 0.72 -1.2 2,648,481 + CA264_11425 0.81 +0.0 2,648,482 - CA264_11425 0.81 +0.1 2,648,482 - CA264_11425 0.81 -1.0 2,648,567 - CA264_11425 0.89 +0.6 2,648,567 - CA264_11425 0.89 -0.1 2,648,594 + -0.6 2,648,594 + -0.1 2,648,597 - -0.9 2,648,597 - -0.5 2,648,597 - +0.7 2,648,599 - -1.6 2,648,632 - +1.6 2,648,688 + -0.6 2,648,688 + +0.2 2,648,688 + -0.7 2,648,688 + +1.0 2,648,688 + +0.2 2,648,688 + +0.2 2,648,688 + +0.4 2,648,688 + -0.8 2,648,688 + -0.9 2,648,688 + -0.6 2,648,688 + -0.0 2,648,688 + -0.9 2,648,688 + -0.5 2,648,688 + -0.4 2,648,688 + -0.4 2,648,688 + -0.4 2,648,688 + -0.2 2,648,688 + +0.3 2,648,688 + +1.8 2,648,688 + -0.2 2,648,689 - -0.8 2,648,689 - -0.3 2,648,689 - -0.4 2,648,689 - -1.2 2,648,689 - -2.0 2,648,689 - -0.1 2,648,689 - +0.4 2,648,689 - +0.2 2,648,689 - -0.2 2,648,689 - -0.0 2,648,689 - -0.7 2,648,689 - -0.8 2,648,689 - -0.9 2,648,689 - -2.0 2,648,689 - -1.9 2,648,689 - -0.5 2,648,689 - -0.8 2,648,689 - -0.8 2,648,689 - -0.9 2,648,689 - -0.2 2,648,689 - -1.0 2,648,695 - -0.8 2,648,697 + +0.2 2,648,697 + -0.9 2,648,697 + +1.4 2,648,697 + -0.6 2,648,698 - -1.0 2,648,698 - -0.9 2,648,708 - -1.0 2,648,708 - -1.2 2,648,708 - -1.0 2,648,711 - -1.3 2,648,828 + -0.8 2,648,828 + -0.3 2,648,828 + +1.8 2,648,831 - -0.1 2,648,888 - -0.4 2,648,909 - +0.1 2,648,920 - -0.1 2,648,922 + -1.2 2,648,929 + -0.0 2,648,930 - -0.9 2,648,930 - -0.8 2,648,959 - -0.8 2,648,959 - -1.2 2,648,960 + +0.0 2,648,960 + -0.3 2,648,961 - -1.3 2,648,961 - -0.6 2,648,961 - +0.2 2,648,961 - -0.3 2,648,976 - -0.8 2,648,990 + +0.3 2,649,112 + CA264_11430 0.13 +0.7 2,649,202 + CA264_11430 0.22 +0.4 2,649,212 + CA264_11430 0.24 -0.7 2,649,212 + CA264_11430 0.24 -2.2 2,649,212 + CA264_11430 0.24 -0.2 2,649,213 - CA264_11430 0.24 +0.7 2,649,213 - CA264_11430 0.24 -1.1 2,649,213 - CA264_11430 0.24 +0.2 2,649,249 - CA264_11430 0.27 -1.2 2,649,299 + CA264_11430 0.33 -0.4 2,649,341 - CA264_11430 0.37 -1.3 2,649,431 - CA264_11430 0.47 +0.2 2,649,483 + CA264_11430 0.52 -1.1 2,649,506 + CA264_11430 0.55 +0.2 2,649,575 + CA264_11430 0.62 -0.0 2,649,681 + CA264_11430 0.73 -0.2 2,649,685 + CA264_11430 0.73 -0.9 2,649,685 + CA264_11430 0.73 +0.2 2,649,685 + CA264_11430 0.73 -0.1 2,649,685 + CA264_11430 0.73 -0.5 2,649,685 + CA264_11430 0.73 -0.2 2,649,686 - CA264_11430 0.74 -0.2 2,649,688 + CA264_11430 0.74 -0.0 2,649,688 + CA264_11430 0.74 -0.2 2,649,688 + CA264_11430 0.74 +0.2 2,649,688 + CA264_11430 0.74 -0.3 2,649,689 - CA264_11430 0.74 -0.5 2,649,712 + CA264_11430 0.76 +0.4 2,649,713 - CA264_11430 0.76 +0.2 2,649,718 + CA264_11430 0.77 +1.2 2,649,718 + CA264_11430 0.77 -0.6 2,649,719 - CA264_11430 0.77 -0.5 2,649,790 - CA264_11430 0.84 -0.3 2,649,795 + CA264_11430 0.85 +0.1 2,649,796 - CA264_11430 0.85 -0.7 2,649,796 - CA264_11430 0.85 +0.3 2,649,800 - CA264_11430 0.86 -1.3 2,649,800 - CA264_11430 0.86 -1.8 2,649,805 - CA264_11430 0.86 -0.3 2,649,838 - CA264_11430 0.90 -1.5 2,649,872 - +0.4 2,649,936 + +0.7 2,650,036 - -0.3 2,650,106 + CA264_11435 0.11 -0.2 2,650,106 + CA264_11435 0.11 +1.0 2,650,137 - CA264_11435 0.13 -1.5 2,650,137 - CA264_11435 0.13 -1.9 2,650,161 - CA264_11435 0.15 -0.1 2,650,222 + CA264_11435 0.19 -1.1 2,650,223 - CA264_11435 0.19 -1.1 2,650,347 + CA264_11435 0.28 -0.5 2,650,347 + CA264_11435 0.28 +0.6 2,650,347 + CA264_11435 0.28 -0.5 2,650,347 + CA264_11435 0.28 -2.2 2,650,348 - CA264_11435 0.28 +0.1 2,650,348 - CA264_11435 0.28 -1.1 2,650,352 - CA264_11435 0.28 -0.5 2,650,435 + CA264_11435 0.34 -0.6 2,650,436 - CA264_11435 0.34 -2.2 2,650,447 + CA264_11435 0.35 +0.2 2,650,447 + CA264_11435 0.35 -0.6 2,650,541 + CA264_11435 0.42 -0.8 2,650,551 + CA264_11435 0.43 -0.8 2,650,551 + CA264_11435 0.43 +0.2 2,650,575 - CA264_11435 0.44 +0.5 2,650,579 - CA264_11435 0.45 +0.7 2,650,650 + CA264_11435 0.50 -0.1 2,650,655 + CA264_11435 0.50 -0.3 2,650,655 + CA264_11435 0.50 -2.0 2,650,655 + CA264_11435 0.50 -0.1 2,650,706 - CA264_11435 0.54 +0.1 2,650,727 + CA264_11435 0.55 -0.2 2,650,779 - CA264_11435 0.59 -1.2 2,650,882 - CA264_11435 0.66 -0.6 2,650,882 - CA264_11435 0.66 -0.3 2,650,882 - CA264_11435 0.66 -0.7 2,650,884 - CA264_11435 0.67 +0.1
Or see this region's nucleotide sequence