Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11405 and CA264_11410 are separated by 57 nucleotides CA264_11410 and CA264_11415 overlap by 8 nucleotides CA264_11415 and CA264_11420 overlap by 4 nucleotides
CA264_11405: CA264_11405 - glycerophosphodiester phosphodiesterase, at 2,643,199 to 2,644,098
_11405
CA264_11410: CA264_11410 - histidine phosphatase family protein, at 2,644,156 to 2,644,755
_11410
CA264_11415: CA264_11415 - carbohydrate kinase, at 2,644,748 to 2,646,208
_11415
CA264_11420: CA264_11420 - sugar kinase, at 2,646,205 to 2,647,665
_11420
Position (kb)
2644
2645
2646
2647 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2643.779 kb on + strand, within CA264_11405 at 2643.811 kb on - strand, within CA264_11405 at 2643.871 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.904 kb on - strand, within CA264_11405 at 2643.925 kb on - strand, within CA264_11405 at 2643.989 kb on + strand, within CA264_11405 at 2643.999 kb on - strand, within CA264_11405 at 2644.044 kb on + strand at 2644.058 kb on - strand at 2644.105 kb on + strand at 2644.132 kb on + strand at 2644.133 kb on - strand at 2644.209 kb on + strand at 2644.210 kb on - strand at 2644.286 kb on + strand, within CA264_11410 at 2644.287 kb on - strand, within CA264_11410 at 2644.321 kb on + strand, within CA264_11410 at 2644.327 kb on - strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.562 kb on + strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.599 kb on - strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.694 kb on + strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.739 kb on - strand at 2644.755 kb on + strand at 2644.762 kb on - strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.773 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.776 kb on + strand at 2644.792 kb on + strand at 2644.866 kb on - strand at 2644.892 kb on + strand at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.925 kb on + strand, within CA264_11415 at 2644.926 kb on - strand, within CA264_11415 at 2645.041 kb on - strand, within CA264_11415 at 2645.066 kb on + strand, within CA264_11415 at 2645.104 kb on - strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.122 kb on + strand, within CA264_11415 at 2645.169 kb on - strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.228 kb on + strand, within CA264_11415 at 2645.237 kb on - strand, within CA264_11415 at 2645.298 kb on - strand, within CA264_11415 at 2645.365 kb on - strand, within CA264_11415 at 2645.384 kb on + strand, within CA264_11415 at 2645.385 kb on - strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.661 kb on + strand, within CA264_11415 at 2645.693 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.711 kb on + strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.728 kb on - strand, within CA264_11415 at 2645.821 kb on + strand, within CA264_11415 at 2645.830 kb on + strand, within CA264_11415 at 2645.858 kb on + strand, within CA264_11415 at 2645.904 kb on + strand, within CA264_11415 at 2645.905 kb on - strand, within CA264_11415 at 2645.966 kb on - strand, within CA264_11415 at 2645.971 kb on + strand, within CA264_11415 at 2645.971 kb on + strand, within CA264_11415 at 2645.972 kb on - strand, within CA264_11415 at 2645.987 kb on + strand, within CA264_11415 at 2645.997 kb on - strand, within CA264_11415 at 2645.997 kb on - strand, within CA264_11415 at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.183 kb on - strand at 2646.183 kb on - strand at 2646.196 kb on - strand at 2646.209 kb on - strand at 2646.255 kb on + strand at 2646.300 kb on - strand at 2646.304 kb on + strand at 2646.305 kb on - strand at 2646.321 kb on + strand at 2646.321 kb on + strand at 2646.322 kb on - strand at 2646.322 kb on - strand at 2646.334 kb on + strand at 2646.370 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.482 kb on + strand, within CA264_11420 at 2646.487 kb on + strand, within CA264_11420 at 2646.488 kb on - strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.546 kb on + strand, within CA264_11420 at 2646.582 kb on + strand, within CA264_11420 at 2646.720 kb on - strand, within CA264_11420 at 2646.720 kb on - strand, within CA264_11420 at 2646.790 kb on + strand, within CA264_11420 at 2646.790 kb on + strand, within CA264_11420 at 2646.793 kb on + strand, within CA264_11420 at 2646.793 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.812 kb on - strand, within CA264_11420 at 2646.854 kb on + strand, within CA264_11420 at 2646.854 kb on + strand, within CA264_11420 at 2646.885 kb on + strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.964 kb on + strand, within CA264_11420 at 2647.027 kb on + strand, within CA264_11420 at 2647.028 kb on - strand, within CA264_11420 at 2647.029 kb on + strand, within CA264_11420 at 2647.121 kb on + strand, within CA264_11420 at 2647.121 kb on + strand, within CA264_11420 at 2647.122 kb on - strand, within CA264_11420 at 2647.122 kb on - strand, within CA264_11420 at 2647.171 kb on + strand, within CA264_11420 at 2647.195 kb on + strand, within CA264_11420 at 2647.196 kb on - strand, within CA264_11420 at 2647.201 kb on + strand, within CA264_11420 at 2647.201 kb on + strand, within CA264_11420 at 2647.202 kb on - strand, within CA264_11420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,643,779 + CA264_11405 0.64 -0.1 2,643,811 - CA264_11405 0.68 +0.1 2,643,871 + CA264_11405 0.75 +0.0 2,643,903 + CA264_11405 0.78 -0.6 2,643,903 + CA264_11405 0.78 +0.2 2,643,904 - CA264_11405 0.78 +1.2 2,643,925 - CA264_11405 0.81 +0.5 2,643,989 + CA264_11405 0.88 +0.1 2,643,999 - CA264_11405 0.89 +1.2 2,644,044 + +0.2 2,644,058 - -0.8 2,644,105 + +1.2 2,644,132 + +0.2 2,644,133 - +0.5 2,644,209 + -0.2 2,644,210 - -1.0 2,644,286 + CA264_11410 0.22 -0.1 2,644,287 - CA264_11410 0.22 -0.3 2,644,321 + CA264_11410 0.28 +0.1 2,644,327 - CA264_11410 0.28 -0.7 2,644,378 + CA264_11410 0.37 +0.4 2,644,378 + CA264_11410 0.37 +0.7 2,644,378 + CA264_11410 0.37 -0.6 2,644,381 - CA264_11410 0.38 -0.8 2,644,381 - CA264_11410 0.38 -0.2 2,644,562 + CA264_11410 0.68 +0.5 2,644,563 - CA264_11410 0.68 +0.3 2,644,563 - CA264_11410 0.68 -0.1 2,644,598 + CA264_11410 0.74 -0.7 2,644,598 + CA264_11410 0.74 -0.1 2,644,599 - CA264_11410 0.74 +0.2 2,644,600 + CA264_11410 0.74 -0.6 2,644,600 + CA264_11410 0.74 -0.5 2,644,600 + CA264_11410 0.74 +0.0 2,644,600 + CA264_11410 0.74 -1.0 2,644,601 - CA264_11410 0.74 -0.3 2,644,601 - CA264_11410 0.74 +1.2 2,644,601 - CA264_11410 0.74 -0.9 2,644,601 - CA264_11410 0.74 -0.5 2,644,694 + CA264_11410 0.90 -0.4 2,644,695 - CA264_11410 0.90 -0.4 2,644,695 - CA264_11410 0.90 +0.2 2,644,739 - -0.6 2,644,755 + -0.3 2,644,762 - -1.2 2,644,772 + -0.2 2,644,772 + -0.5 2,644,772 + -0.8 2,644,773 - +0.6 2,644,775 - +0.8 2,644,775 - -0.5 2,644,775 - +0.2 2,644,776 + +0.1 2,644,792 + +0.0 2,644,866 - -0.8 2,644,892 + +0.6 2,644,903 + CA264_11415 0.11 +0.6 2,644,903 + CA264_11415 0.11 +0.2 2,644,903 + CA264_11415 0.11 +0.3 2,644,904 - CA264_11415 0.11 -0.5 2,644,904 - CA264_11415 0.11 -0.2 2,644,905 + CA264_11415 0.11 -0.8 2,644,905 + CA264_11415 0.11 -0.6 2,644,925 + CA264_11415 0.12 +0.2 2,644,926 - CA264_11415 0.12 -0.4 2,645,041 - CA264_11415 0.20 -0.3 2,645,066 + CA264_11415 0.22 -1.1 2,645,104 - CA264_11415 0.24 -1.1 2,645,108 + CA264_11415 0.25 -0.7 2,645,108 + CA264_11415 0.25 +1.0 2,645,122 + CA264_11415 0.26 -0.2 2,645,169 - CA264_11415 0.29 -0.5 2,645,185 + CA264_11415 0.30 -0.5 2,645,185 + CA264_11415 0.30 -0.4 2,645,228 + CA264_11415 0.33 -0.8 2,645,237 - CA264_11415 0.33 -0.4 2,645,298 - CA264_11415 0.38 -0.9 2,645,365 - CA264_11415 0.42 -0.2 2,645,384 + CA264_11415 0.44 -1.5 2,645,385 - CA264_11415 0.44 -0.2 2,645,557 + CA264_11415 0.55 -0.6 2,645,557 + CA264_11415 0.55 -0.3 2,645,558 - CA264_11415 0.55 -0.3 2,645,558 - CA264_11415 0.55 -0.3 2,645,661 + CA264_11415 0.62 +0.7 2,645,693 + CA264_11415 0.65 +0.9 2,645,695 + CA264_11415 0.65 -1.3 2,645,695 + CA264_11415 0.65 +0.4 2,645,695 + CA264_11415 0.65 -0.3 2,645,711 + CA264_11415 0.66 -0.3 2,645,712 - CA264_11415 0.66 -0.4 2,645,712 - CA264_11415 0.66 -0.2 2,645,712 - CA264_11415 0.66 -0.7 2,645,728 - CA264_11415 0.67 -0.5 2,645,821 + CA264_11415 0.73 +0.2 2,645,830 + CA264_11415 0.74 -1.5 2,645,858 + CA264_11415 0.76 -0.8 2,645,904 + CA264_11415 0.79 +0.8 2,645,905 - CA264_11415 0.79 -1.2 2,645,966 - CA264_11415 0.83 +0.5 2,645,971 + CA264_11415 0.84 +0.0 2,645,971 + CA264_11415 0.84 -0.3 2,645,972 - CA264_11415 0.84 -2.4 2,645,987 + CA264_11415 0.85 -0.3 2,645,997 - CA264_11415 0.85 +0.3 2,645,997 - CA264_11415 0.85 +0.3 2,646,182 + -0.4 2,646,182 + +1.4 2,646,182 + -0.6 2,646,182 + -1.5 2,646,182 + -1.5 2,646,183 - +0.4 2,646,183 - -1.1 2,646,196 - -0.7 2,646,209 - -0.5 2,646,255 + -0.7 2,646,300 - -0.8 2,646,304 + -0.1 2,646,305 - -0.8 2,646,321 + -1.2 2,646,321 + -0.4 2,646,322 - +0.4 2,646,322 - +0.6 2,646,334 + -1.3 2,646,370 + CA264_11420 0.11 -0.4 2,646,478 + CA264_11420 0.19 -1.4 2,646,478 + CA264_11420 0.19 -0.4 2,646,478 + CA264_11420 0.19 -0.6 2,646,478 + CA264_11420 0.19 -0.4 2,646,482 + CA264_11420 0.19 -1.4 2,646,487 + CA264_11420 0.19 -0.2 2,646,488 - CA264_11420 0.19 -0.7 2,646,544 + CA264_11420 0.23 -0.1 2,646,544 + CA264_11420 0.23 +2.0 2,646,544 + CA264_11420 0.23 +0.5 2,646,545 - CA264_11420 0.23 +1.6 2,646,545 - CA264_11420 0.23 -0.6 2,646,545 - CA264_11420 0.23 -0.8 2,646,546 + CA264_11420 0.23 +1.7 2,646,582 + CA264_11420 0.26 -0.9 2,646,720 - CA264_11420 0.35 -0.2 2,646,720 - CA264_11420 0.35 +0.4 2,646,790 + CA264_11420 0.40 +0.9 2,646,790 + CA264_11420 0.40 -0.4 2,646,793 + CA264_11420 0.40 -0.9 2,646,793 + CA264_11420 0.40 -0.5 2,646,811 + CA264_11420 0.41 -1.1 2,646,811 + CA264_11420 0.41 -0.9 2,646,811 + CA264_11420 0.41 +0.1 2,646,812 - CA264_11420 0.42 +0.0 2,646,854 + CA264_11420 0.44 -0.6 2,646,854 + CA264_11420 0.44 -0.3 2,646,885 + CA264_11420 0.47 -1.3 2,646,886 - CA264_11420 0.47 +0.1 2,646,886 - CA264_11420 0.47 -0.9 2,646,886 - CA264_11420 0.47 -1.6 2,646,964 + CA264_11420 0.52 -0.4 2,647,027 + CA264_11420 0.56 -1.0 2,647,028 - CA264_11420 0.56 -0.2 2,647,029 + CA264_11420 0.56 +0.0 2,647,121 + CA264_11420 0.63 -0.5 2,647,121 + CA264_11420 0.63 +0.1 2,647,122 - CA264_11420 0.63 +0.9 2,647,122 - CA264_11420 0.63 -0.7 2,647,171 + CA264_11420 0.66 +0.4 2,647,195 + CA264_11420 0.68 +0.8 2,647,196 - CA264_11420 0.68 -1.3 2,647,201 + CA264_11420 0.68 -1.7 2,647,201 + CA264_11420 0.68 -1.0 2,647,202 - CA264_11420 0.68 -0.5
Or see this region's nucleotide sequence