Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11270 and CA264_11275 are separated by 148 nucleotides CA264_11275 and CA264_11280 overlap by 17 nucleotides CA264_11280 and CA264_11285 overlap by 14 nucleotides CA264_11285 and CA264_11290 are separated by 131 nucleotides
CA264_11270: CA264_11270 - hypothetical protein, at 2,610,672 to 2,611,055
_11270
CA264_11275: CA264_11275 - hypothetical protein, at 2,611,204 to 2,611,644
_11275
CA264_11280: CA264_11280 - SCO family protein, at 2,611,628 to 2,612,311
_11280
CA264_11285: CA264_11285 - cytochrome c class I, at 2,612,298 to 2,612,705
_11285
CA264_11290: CA264_11290 - NADH pyrophosphatase, at 2,612,837 to 2,613,760
_11290
Position (kb)
2611
2612
2613 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2610.685 kb on - strand at 2610.685 kb on - strand at 2610.685 kb on - strand at 2610.685 kb on - strand at 2610.685 kb on - strand at 2610.702 kb on - strand at 2610.726 kb on - strand, within CA264_11270 at 2610.736 kb on - strand, within CA264_11270 at 2610.736 kb on - strand, within CA264_11270 at 2610.736 kb on - strand, within CA264_11270 at 2610.740 kb on - strand, within CA264_11270 at 2610.740 kb on - strand, within CA264_11270 at 2610.904 kb on + strand, within CA264_11270 at 2610.904 kb on + strand, within CA264_11270 at 2610.996 kb on + strand, within CA264_11270 at 2610.997 kb on - strand, within CA264_11270 at 2611.013 kb on + strand, within CA264_11270 at 2611.014 kb on - strand, within CA264_11270 at 2611.014 kb on - strand, within CA264_11270 at 2611.075 kb on - strand at 2611.105 kb on + strand at 2611.156 kb on + strand at 2611.156 kb on + strand at 2611.157 kb on - strand at 2611.159 kb on + strand at 2611.194 kb on + strand at 2611.194 kb on + strand at 2611.195 kb on - strand at 2611.195 kb on - strand at 2611.196 kb on + strand at 2611.196 kb on + strand at 2611.196 kb on + strand at 2611.197 kb on - strand at 2611.197 kb on - strand at 2611.197 kb on - strand at 2611.218 kb on + strand at 2611.220 kb on + strand at 2611.223 kb on - strand at 2611.247 kb on + strand at 2611.247 kb on + strand at 2611.248 kb on - strand, within CA264_11275 at 2611.248 kb on - strand, within CA264_11275 at 2611.350 kb on + strand, within CA264_11275 at 2611.350 kb on + strand, within CA264_11275 at 2611.351 kb on - strand, within CA264_11275 at 2611.351 kb on - strand, within CA264_11275 at 2611.541 kb on - strand, within CA264_11275 at 2611.575 kb on - strand, within CA264_11275 at 2611.620 kb on - strand at 2611.665 kb on + strand at 2611.704 kb on - strand, within CA264_11280 at 2611.742 kb on - strand, within CA264_11280 at 2611.742 kb on - strand, within CA264_11280 at 2611.883 kb on + strand, within CA264_11280 at 2611.965 kb on - strand, within CA264_11280 at 2612.318 kb on - strand at 2612.726 kb on + strand at 2612.727 kb on - strand at 2612.727 kb on - strand at 2612.839 kb on - strand at 2612.865 kb on + strand at 2612.865 kb on + strand at 2612.866 kb on - strand at 2613.003 kb on + strand, within CA264_11290 at 2613.004 kb on - strand, within CA264_11290 at 2613.008 kb on - strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.090 kb on + strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.091 kb on - strand, within CA264_11290 at 2613.096 kb on - strand, within CA264_11290 at 2613.097 kb on + strand, within CA264_11290 at 2613.192 kb on + strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.193 kb on - strand, within CA264_11290 at 2613.250 kb on + strand, within CA264_11290 at 2613.254 kb on + strand, within CA264_11290 at 2613.310 kb on + strand, within CA264_11290
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,610,685 - -0.6 2,610,685 - -0.4 2,610,685 - -0.4 2,610,685 - -1.5 2,610,685 - -0.4 2,610,702 - +0.0 2,610,726 - CA264_11270 0.14 +0.1 2,610,736 - CA264_11270 0.17 -0.1 2,610,736 - CA264_11270 0.17 +0.3 2,610,736 - CA264_11270 0.17 -0.2 2,610,740 - CA264_11270 0.18 -0.7 2,610,740 - CA264_11270 0.18 +0.3 2,610,904 + CA264_11270 0.60 +0.0 2,610,904 + CA264_11270 0.60 +0.0 2,610,996 + CA264_11270 0.84 -2.0 2,610,997 - CA264_11270 0.85 -0.6 2,611,013 + CA264_11270 0.89 -0.3 2,611,014 - CA264_11270 0.89 +0.2 2,611,014 - CA264_11270 0.89 -0.6 2,611,075 - +0.0 2,611,105 + -0.8 2,611,156 + -0.2 2,611,156 + -0.4 2,611,157 - -0.4 2,611,159 + +2.2 2,611,194 + +2.2 2,611,194 + -0.8 2,611,195 - -0.2 2,611,195 - +1.3 2,611,196 + +1.2 2,611,196 + -0.4 2,611,196 + -1.1 2,611,197 - -0.9 2,611,197 - -0.3 2,611,197 - +0.4 2,611,218 + -0.1 2,611,220 + +0.3 2,611,223 - -0.1 2,611,247 + -1.5 2,611,247 + +0.0 2,611,248 - CA264_11275 0.10 +0.3 2,611,248 - CA264_11275 0.10 +0.5 2,611,350 + CA264_11275 0.33 +0.0 2,611,350 + CA264_11275 0.33 +0.9 2,611,351 - CA264_11275 0.33 -1.7 2,611,351 - CA264_11275 0.33 -0.6 2,611,541 - CA264_11275 0.76 +0.6 2,611,575 - CA264_11275 0.84 -0.8 2,611,620 - -0.5 2,611,665 + +0.7 2,611,704 - CA264_11280 0.11 +0.2 2,611,742 - CA264_11280 0.17 -0.2 2,611,742 - CA264_11280 0.17 +0.8 2,611,883 + CA264_11280 0.37 +1.8 2,611,965 - CA264_11280 0.49 +0.6 2,612,318 - -1.0 2,612,726 + -0.3 2,612,727 - -1.5 2,612,727 - +1.1 2,612,839 - +1.2 2,612,865 + -1.1 2,612,865 + -0.0 2,612,866 - +0.5 2,613,003 + CA264_11290 0.18 -0.9 2,613,004 - CA264_11290 0.18 -0.5 2,613,008 - CA264_11290 0.19 +1.0 2,613,090 + CA264_11290 0.27 -0.1 2,613,090 + CA264_11290 0.27 -0.3 2,613,090 + CA264_11290 0.27 +0.1 2,613,090 + CA264_11290 0.27 -1.3 2,613,091 - CA264_11290 0.27 +0.6 2,613,091 - CA264_11290 0.27 +0.5 2,613,096 - CA264_11290 0.28 -0.2 2,613,097 + CA264_11290 0.28 +0.2 2,613,192 + CA264_11290 0.38 -0.5 2,613,193 - CA264_11290 0.39 -0.3 2,613,193 - CA264_11290 0.39 -1.5 2,613,193 - CA264_11290 0.39 -0.0 2,613,193 - CA264_11290 0.39 +0.1 2,613,193 - CA264_11290 0.39 +0.5 2,613,193 - CA264_11290 0.39 +0.9 2,613,250 + CA264_11290 0.45 +0.4 2,613,254 + CA264_11290 0.45 +0.1 2,613,310 + CA264_11290 0.51 -0.2
Or see this region's nucleotide sequence