Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11240 and CA264_11245 are separated by 379 nucleotides CA264_11245 and CA264_11250 are separated by 39 nucleotides CA264_11250 and CA264_11255 are separated by 204 nucleotides
CA264_11240: CA264_11240 - class D beta-lactamase, at 2,602,620 to 2,603,417
_11240
CA264_11245: CA264_11245 - hypothetical protein, at 2,603,797 to 2,604,012
_11245
CA264_11250: CA264_11250 - hypothetical protein, at 2,604,052 to 2,604,663
_11250
CA264_11255: CA264_11255 - peptidase M13, at 2,604,868 to 2,606,928
_11255
Position (kb)
2604
2605 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2603.062 kb on + strand, within CA264_11240 at 2603.062 kb on + strand, within CA264_11240 at 2603.062 kb on + strand, within CA264_11240 at 2603.063 kb on - strand, within CA264_11240 at 2603.105 kb on + strand, within CA264_11240 at 2603.106 kb on - strand, within CA264_11240 at 2603.106 kb on - strand, within CA264_11240 at 2603.106 kb on - strand, within CA264_11240 at 2603.106 kb on - strand, within CA264_11240 at 2603.114 kb on - strand, within CA264_11240 at 2603.114 kb on - strand, within CA264_11240 at 2603.190 kb on + strand, within CA264_11240 at 2603.190 kb on + strand, within CA264_11240 at 2603.190 kb on + strand, within CA264_11240 at 2603.190 kb on + strand, within CA264_11240 at 2603.191 kb on - strand, within CA264_11240 at 2603.217 kb on - strand, within CA264_11240 at 2603.261 kb on + strand, within CA264_11240 at 2603.261 kb on + strand, within CA264_11240 at 2603.281 kb on - strand, within CA264_11240 at 2603.305 kb on + strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.306 kb on - strand, within CA264_11240 at 2603.315 kb on + strand, within CA264_11240 at 2603.316 kb on - strand, within CA264_11240 at 2603.325 kb on + strand, within CA264_11240 at 2603.326 kb on - strand, within CA264_11240 at 2603.330 kb on + strand, within CA264_11240 at 2603.376 kb on + strand at 2603.377 kb on - strand at 2603.409 kb on + strand at 2603.410 kb on - strand at 2603.438 kb on - strand at 2603.454 kb on + strand at 2603.463 kb on + strand at 2603.464 kb on - strand at 2603.491 kb on + strand at 2603.511 kb on + strand at 2603.519 kb on + strand at 2603.536 kb on + strand at 2603.569 kb on - strand at 2603.605 kb on + strand at 2603.643 kb on + strand at 2603.643 kb on + strand at 2603.643 kb on + strand at 2603.643 kb on + strand at 2603.644 kb on - strand at 2603.644 kb on - strand at 2603.678 kb on - strand at 2603.678 kb on - strand at 2603.690 kb on - strand at 2603.693 kb on + strand at 2603.703 kb on + strand at 2603.725 kb on + strand at 2603.726 kb on - strand at 2603.747 kb on + strand at 2603.750 kb on + strand at 2603.751 kb on - strand at 2603.784 kb on + strand at 2603.810 kb on + strand at 2603.840 kb on - strand, within CA264_11245 at 2603.959 kb on + strand, within CA264_11245 at 2603.961 kb on + strand, within CA264_11245 at 2603.965 kb on - strand, within CA264_11245 at 2603.982 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.989 kb on + strand, within CA264_11245 at 2603.990 kb on - strand, within CA264_11245 at 2603.992 kb on + strand at 2603.992 kb on + strand at 2603.992 kb on + strand at 2604.012 kb on + strand at 2604.072 kb on + strand at 2604.072 kb on + strand at 2604.078 kb on + strand at 2604.079 kb on - strand at 2604.173 kb on - strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.197 kb on + strand, within CA264_11250 at 2604.201 kb on + strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.202 kb on - strand, within CA264_11250 at 2604.212 kb on + strand, within CA264_11250 at 2604.212 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.213 kb on - strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.216 kb on + strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.217 kb on - strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.218 kb on + strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.219 kb on - strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.222 kb on + strand, within CA264_11250 at 2604.223 kb on - strand, within CA264_11250 at 2604.383 kb on - strand, within CA264_11250 at 2604.385 kb on - strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.388 kb on + strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.389 kb on - strand, within CA264_11250 at 2604.390 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.426 kb on + strand, within CA264_11250 at 2604.466 kb on - strand, within CA264_11250 at 2604.507 kb on - strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.540 kb on + strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.541 kb on - strand, within CA264_11250 at 2604.542 kb on + strand, within CA264_11250 at 2604.543 kb on - strand, within CA264_11250 at 2604.553 kb on + strand, within CA264_11250 at 2604.557 kb on + strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.558 kb on - strand, within CA264_11250 at 2604.610 kb on + strand at 2604.697 kb on + strand at 2604.839 kb on + strand at 2604.854 kb on + strand at 2604.854 kb on + strand at 2604.909 kb on + strand at 2604.910 kb on - strand at 2604.951 kb on + strand at 2604.951 kb on + strand at 2605.107 kb on + strand, within CA264_11255 at 2605.142 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.152 kb on + strand, within CA264_11255 at 2605.153 kb on - strand, within CA264_11255 at 2605.163 kb on - strand, within CA264_11255 at 2605.189 kb on - strand, within CA264_11255 at 2605.226 kb on + strand, within CA264_11255 at 2605.236 kb on - strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.475 kb on + strand, within CA264_11255 at 2605.479 kb on - strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.543 kb on + strand, within CA264_11255 at 2605.554 kb on + strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.555 kb on - strand, within CA264_11255 at 2605.557 kb on - strand, within CA264_11255
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,603,062 + CA264_11240 0.55 -0.6 2,603,062 + CA264_11240 0.55 +0.7 2,603,062 + CA264_11240 0.55 +0.3 2,603,063 - CA264_11240 0.56 -0.7 2,603,105 + CA264_11240 0.61 +0.6 2,603,106 - CA264_11240 0.61 +0.2 2,603,106 - CA264_11240 0.61 -0.6 2,603,106 - CA264_11240 0.61 +0.8 2,603,106 - CA264_11240 0.61 +0.2 2,603,114 - CA264_11240 0.62 +0.2 2,603,114 - CA264_11240 0.62 +0.5 2,603,190 + CA264_11240 0.71 -0.2 2,603,190 + CA264_11240 0.71 -0.0 2,603,190 + CA264_11240 0.71 -1.0 2,603,190 + CA264_11240 0.71 -0.4 2,603,191 - CA264_11240 0.72 -0.1 2,603,217 - CA264_11240 0.75 -0.1 2,603,261 + CA264_11240 0.80 +1.5 2,603,261 + CA264_11240 0.80 +0.1 2,603,281 - CA264_11240 0.83 -1.1 2,603,305 + CA264_11240 0.86 +0.3 2,603,306 - CA264_11240 0.86 +0.1 2,603,306 - CA264_11240 0.86 +0.1 2,603,306 - CA264_11240 0.86 -0.3 2,603,306 - CA264_11240 0.86 -0.0 2,603,306 - CA264_11240 0.86 -0.0 2,603,306 - CA264_11240 0.86 -0.2 2,603,315 + CA264_11240 0.87 +0.4 2,603,316 - CA264_11240 0.87 -1.0 2,603,325 + CA264_11240 0.88 -0.2 2,603,326 - CA264_11240 0.88 +0.6 2,603,330 + CA264_11240 0.89 -0.2 2,603,376 + +1.7 2,603,377 - -0.4 2,603,409 + -0.6 2,603,410 - +1.4 2,603,438 - +0.3 2,603,454 + -1.2 2,603,463 + -1.4 2,603,464 - +1.1 2,603,491 + -0.7 2,603,511 + -0.8 2,603,519 + -0.8 2,603,536 + +0.9 2,603,569 - -0.3 2,603,605 + -0.5 2,603,643 + +0.2 2,603,643 + -0.3 2,603,643 + -0.4 2,603,643 + -0.3 2,603,644 - -0.5 2,603,644 - +0.1 2,603,678 - +0.4 2,603,678 - -2.1 2,603,690 - -0.4 2,603,693 + -0.0 2,603,703 + -1.2 2,603,725 + +0.0 2,603,726 - -0.6 2,603,747 + +0.3 2,603,750 + -0.5 2,603,751 - -0.3 2,603,784 + +0.2 2,603,810 + -1.6 2,603,840 - CA264_11245 0.20 -0.6 2,603,959 + CA264_11245 0.75 +0.0 2,603,961 + CA264_11245 0.76 -1.5 2,603,965 - CA264_11245 0.78 +0.3 2,603,982 + CA264_11245 0.86 +1.2 2,603,989 + CA264_11245 0.89 -0.4 2,603,989 + CA264_11245 0.89 +0.8 2,603,989 + CA264_11245 0.89 -0.1 2,603,990 - CA264_11245 0.89 -1.5 2,603,992 + -0.4 2,603,992 + -0.7 2,603,992 + -0.2 2,604,012 + -1.1 2,604,072 + -0.3 2,604,072 + +0.5 2,604,078 + +0.4 2,604,079 - -0.8 2,604,173 - CA264_11250 0.20 -0.4 2,604,197 + CA264_11250 0.24 +0.3 2,604,197 + CA264_11250 0.24 +0.7 2,604,201 + CA264_11250 0.24 -0.6 2,604,202 - CA264_11250 0.25 +0.4 2,604,202 - CA264_11250 0.25 +0.4 2,604,212 + CA264_11250 0.26 -0.6 2,604,212 - CA264_11250 0.26 +1.2 2,604,213 - CA264_11250 0.26 -0.1 2,604,213 - CA264_11250 0.26 +0.8 2,604,213 - CA264_11250 0.26 -0.5 2,604,216 + CA264_11250 0.27 +1.4 2,604,216 + CA264_11250 0.27 -0.8 2,604,216 + CA264_11250 0.27 -0.8 2,604,216 + CA264_11250 0.27 -0.5 2,604,216 + CA264_11250 0.27 +0.9 2,604,216 + CA264_11250 0.27 +0.0 2,604,216 + CA264_11250 0.27 -1.6 2,604,217 - CA264_11250 0.27 -1.1 2,604,217 - CA264_11250 0.27 +0.4 2,604,217 - CA264_11250 0.27 -0.4 2,604,217 - CA264_11250 0.27 -0.5 2,604,218 + CA264_11250 0.27 -0.3 2,604,218 + CA264_11250 0.27 -0.4 2,604,218 + CA264_11250 0.27 +0.6 2,604,218 + CA264_11250 0.27 +1.0 2,604,218 + CA264_11250 0.27 +0.4 2,604,219 - CA264_11250 0.27 -1.5 2,604,219 - CA264_11250 0.27 -0.1 2,604,219 - CA264_11250 0.27 +1.3 2,604,219 - CA264_11250 0.27 -1.0 2,604,222 + CA264_11250 0.28 -0.2 2,604,222 + CA264_11250 0.28 -0.1 2,604,223 - CA264_11250 0.28 -0.8 2,604,383 - CA264_11250 0.54 -0.6 2,604,385 - CA264_11250 0.54 +0.0 2,604,388 + CA264_11250 0.55 +0.5 2,604,388 + CA264_11250 0.55 -1.5 2,604,388 + CA264_11250 0.55 -1.8 2,604,388 + CA264_11250 0.55 -0.8 2,604,388 + CA264_11250 0.55 -1.1 2,604,388 + CA264_11250 0.55 +1.8 2,604,388 + CA264_11250 0.55 +0.2 2,604,389 - CA264_11250 0.55 +0.3 2,604,389 - CA264_11250 0.55 -0.1 2,604,389 - CA264_11250 0.55 -1.2 2,604,390 + CA264_11250 0.55 -0.6 2,604,426 + CA264_11250 0.61 +0.6 2,604,426 + CA264_11250 0.61 +0.3 2,604,466 - CA264_11250 0.68 -0.1 2,604,507 - CA264_11250 0.74 -0.2 2,604,540 + CA264_11250 0.80 -0.1 2,604,540 + CA264_11250 0.80 -0.4 2,604,541 - CA264_11250 0.80 +0.3 2,604,541 - CA264_11250 0.80 -0.1 2,604,541 - CA264_11250 0.80 +0.1 2,604,542 + CA264_11250 0.80 +0.5 2,604,543 - CA264_11250 0.80 +0.7 2,604,553 + CA264_11250 0.82 -0.1 2,604,557 + CA264_11250 0.83 +0.2 2,604,558 - CA264_11250 0.83 -0.0 2,604,558 - CA264_11250 0.83 -0.3 2,604,610 + +0.1 2,604,697 + -0.6 2,604,839 + -0.3 2,604,854 + +0.4 2,604,854 + -0.1 2,604,909 + -1.0 2,604,910 - -1.7 2,604,951 + +0.5 2,604,951 + +0.2 2,605,107 + CA264_11255 0.12 +0.2 2,605,142 + CA264_11255 0.13 +0.1 2,605,152 + CA264_11255 0.14 +1.7 2,605,152 + CA264_11255 0.14 -0.1 2,605,153 - CA264_11255 0.14 -0.6 2,605,163 - CA264_11255 0.14 -1.8 2,605,189 - CA264_11255 0.16 +0.9 2,605,226 + CA264_11255 0.17 +0.4 2,605,236 - CA264_11255 0.18 -0.4 2,605,475 + CA264_11255 0.29 +0.0 2,605,475 + CA264_11255 0.29 -0.1 2,605,479 - CA264_11255 0.30 +0.2 2,605,543 + CA264_11255 0.33 -0.1 2,605,543 + CA264_11255 0.33 +0.6 2,605,543 + CA264_11255 0.33 -0.3 2,605,554 + CA264_11255 0.33 -0.1 2,605,555 - CA264_11255 0.33 -0.4 2,605,555 - CA264_11255 0.33 +0.2 2,605,557 - CA264_11255 0.33 -0.4
Or see this region's nucleotide sequence