Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11110 and CA264_11115 are separated by 45 nucleotides CA264_11115 and CA264_11120 are separated by 48 nucleotides CA264_11120 and CA264_11125 are separated by 266 nucleotides
CA264_11110: CA264_11110 - SNase-like nuclease, at 2,565,635 to 2,566,471
_11110
CA264_11115: CA264_11115 - hypothetical protein, at 2,566,517 to 2,566,942
_11115
CA264_11120: CA264_11120 - universal stress protein UspA, at 2,566,991 to 2,567,845
_11120
CA264_11125: CA264_11125 - bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase, at 2,568,112 to 2,570,328
_11125
Position (kb)
2566
2567
2568 Strain fitness (log2 ratio)
-2
-1
0
1 at 2565.999 kb on + strand, within CA264_11110 at 2566.148 kb on - strand, within CA264_11110 at 2566.323 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.353 kb on - strand, within CA264_11110 at 2566.359 kb on + strand, within CA264_11110 at 2566.360 kb on - strand, within CA264_11110 at 2566.483 kb on + strand at 2566.484 kb on - strand at 2566.511 kb on - strand at 2566.511 kb on - strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.514 kb on + strand at 2566.515 kb on - strand at 2566.515 kb on - strand at 2566.517 kb on - strand at 2566.536 kb on + strand at 2566.537 kb on - strand at 2566.671 kb on + strand, within CA264_11115 at 2566.672 kb on - strand, within CA264_11115 at 2566.766 kb on - strand, within CA264_11115 at 2566.813 kb on + strand, within CA264_11115 at 2566.868 kb on + strand, within CA264_11115 at 2566.896 kb on + strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.897 kb on - strand, within CA264_11115 at 2566.903 kb on + strand at 2566.904 kb on - strand at 2566.932 kb on + strand at 2566.933 kb on - strand at 2566.941 kb on - strand at 2566.992 kb on + strand at 2567.038 kb on - strand at 2567.066 kb on - strand at 2567.124 kb on - strand, within CA264_11120 at 2567.144 kb on + strand, within CA264_11120 at 2567.352 kb on + strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.353 kb on - strand, within CA264_11120 at 2567.517 kb on + strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.571 kb on - strand, within CA264_11120 at 2567.578 kb on - strand, within CA264_11120 at 2567.633 kb on - strand, within CA264_11120 at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.778 kb on + strand at 2567.779 kb on - strand at 2567.787 kb on + strand at 2567.788 kb on - strand at 2567.832 kb on - strand at 2567.885 kb on + strand at 2567.886 kb on - strand at 2567.887 kb on + strand at 2567.898 kb on + strand at 2567.899 kb on - strand at 2567.901 kb on + strand at 2567.902 kb on - strand at 2567.905 kb on + strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.906 kb on - strand at 2567.918 kb on - strand at 2568.045 kb on + strand at 2568.054 kb on + strand at 2568.098 kb on + strand at 2568.100 kb on + strand at 2568.203 kb on - strand at 2568.209 kb on + strand at 2568.241 kb on + strand at 2568.246 kb on + strand at 2568.249 kb on - strand at 2568.271 kb on - strand at 2568.403 kb on + strand, within CA264_11125 at 2568.404 kb on - strand, within CA264_11125 at 2568.404 kb on - strand, within CA264_11125 at 2568.423 kb on + strand, within CA264_11125 at 2568.424 kb on - strand, within CA264_11125 at 2568.532 kb on - strand, within CA264_11125 at 2568.532 kb on - strand, within CA264_11125 at 2568.742 kb on - strand, within CA264_11125
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,565,999 + CA264_11110 0.43 -1.1 2,566,148 - CA264_11110 0.61 -0.4 2,566,323 - CA264_11110 0.82 -0.3 2,566,353 - CA264_11110 0.86 -0.4 2,566,353 - CA264_11110 0.86 +0.5 2,566,359 + CA264_11110 0.86 +0.0 2,566,360 - CA264_11110 0.87 -0.2 2,566,483 + -0.2 2,566,484 - -0.9 2,566,511 - +0.0 2,566,511 - +0.7 2,566,514 + -0.4 2,566,514 + -0.9 2,566,514 + -0.7 2,566,514 + -0.2 2,566,515 - +1.1 2,566,515 - -1.3 2,566,517 - -0.2 2,566,536 + +0.0 2,566,537 - -0.1 2,566,671 + CA264_11115 0.36 +0.2 2,566,672 - CA264_11115 0.36 +0.0 2,566,766 - CA264_11115 0.58 -0.3 2,566,813 + CA264_11115 0.69 -0.1 2,566,868 + CA264_11115 0.82 -0.7 2,566,896 + CA264_11115 0.89 -1.1 2,566,897 - CA264_11115 0.89 -0.1 2,566,897 - CA264_11115 0.89 -0.4 2,566,903 + -0.2 2,566,904 - -0.2 2,566,932 + -1.1 2,566,933 - -0.6 2,566,941 - -0.3 2,566,992 + -1.6 2,567,038 - -2.2 2,567,066 - +0.2 2,567,124 - CA264_11120 0.16 -0.4 2,567,144 + CA264_11120 0.18 -0.4 2,567,352 + CA264_11120 0.42 +0.1 2,567,353 - CA264_11120 0.42 -0.7 2,567,353 - CA264_11120 0.42 -0.4 2,567,517 + CA264_11120 0.62 -0.2 2,567,571 - CA264_11120 0.68 +0.1 2,567,571 - CA264_11120 0.68 -1.5 2,567,578 - CA264_11120 0.69 -0.1 2,567,633 - CA264_11120 0.75 +0.0 2,567,778 + -1.1 2,567,778 + -0.8 2,567,778 + -1.4 2,567,779 - -0.2 2,567,787 + -0.0 2,567,788 - +0.6 2,567,832 - +0.2 2,567,885 + -0.4 2,567,886 - -1.2 2,567,887 + -0.5 2,567,898 + +0.2 2,567,899 - -0.0 2,567,901 + -1.1 2,567,902 - -0.8 2,567,905 + -1.1 2,567,906 - +0.5 2,567,906 - -1.4 2,567,906 - -0.4 2,567,906 - -1.6 2,567,918 - -0.6 2,568,045 + +0.2 2,568,054 + +0.0 2,568,098 + -0.2 2,568,100 + -0.9 2,568,203 - -0.6 2,568,209 + -0.7 2,568,241 + -1.2 2,568,246 + -1.2 2,568,249 - -1.3 2,568,271 - -0.8 2,568,403 + CA264_11125 0.13 -0.0 2,568,404 - CA264_11125 0.13 -0.3 2,568,404 - CA264_11125 0.13 -1.0 2,568,423 + CA264_11125 0.14 +0.1 2,568,424 - CA264_11125 0.14 +0.2 2,568,532 - CA264_11125 0.19 -1.1 2,568,532 - CA264_11125 0.19 -0.7 2,568,742 - CA264_11125 0.28 -0.4
Or see this region's nucleotide sequence