Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10725 and CA264_10730 are separated by 104 nucleotides CA264_10730 and CA264_10735 are separated by 279 nucleotides
CA264_10725: CA264_10725 - T9SS C-terminal target domain-containing protein, at 2,474,612 to 2,477,902
_10725
CA264_10730: CA264_10730 - aconitate hydratase, at 2,478,007 to 2,480,286
_10730
CA264_10735: CA264_10735 - alkyl hydroperoxide reductase, at 2,480,566 to 2,481,747
_10735
Position (kb)
2478
2479
2480
2481 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2477.029 kb on - strand, within CA264_10725 at 2477.055 kb on + strand, within CA264_10725 at 2477.056 kb on - strand, within CA264_10725 at 2477.157 kb on - strand, within CA264_10725 at 2477.249 kb on + strand, within CA264_10725 at 2477.255 kb on - strand, within CA264_10725 at 2477.307 kb on - strand, within CA264_10725 at 2477.347 kb on - strand, within CA264_10725 at 2477.371 kb on - strand, within CA264_10725 at 2477.445 kb on + strand, within CA264_10725 at 2477.445 kb on + strand, within CA264_10725 at 2477.446 kb on - strand, within CA264_10725 at 2477.446 kb on - strand, within CA264_10725 at 2477.446 kb on - strand, within CA264_10725 at 2477.551 kb on + strand, within CA264_10725 at 2477.551 kb on + strand, within CA264_10725 at 2477.551 kb on + strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.552 kb on - strand, within CA264_10725 at 2477.555 kb on + strand, within CA264_10725 at 2477.573 kb on + strand, within CA264_10725 at 2477.573 kb on + strand, within CA264_10725 at 2477.574 kb on - strand at 2477.576 kb on - strand at 2477.606 kb on - strand at 2477.606 kb on - strand at 2477.606 kb on - strand at 2477.606 kb on - strand at 2477.625 kb on - strand at 2477.625 kb on - strand at 2477.638 kb on + strand at 2477.638 kb on + strand at 2477.768 kb on - strand at 2477.768 kb on - strand at 2477.810 kb on + strand at 2477.810 kb on + strand at 2477.840 kb on + strand at 2477.840 kb on + strand at 2477.840 kb on + strand at 2477.858 kb on + strand at 2477.901 kb on - strand at 2477.914 kb on + strand at 2480.310 kb on + strand at 2480.311 kb on - strand at 2480.316 kb on - strand at 2480.347 kb on - strand at 2480.366 kb on - strand at 2480.372 kb on + strand at 2480.372 kb on + strand at 2480.373 kb on - strand at 2480.380 kb on + strand at 2480.380 kb on + strand at 2480.380 kb on + strand at 2480.389 kb on - strand at 2480.389 kb on - strand at 2480.407 kb on - strand at 2480.428 kb on + strand at 2480.429 kb on - strand at 2480.429 kb on - strand at 2480.435 kb on + strand at 2480.435 kb on + strand at 2480.435 kb on + strand at 2480.436 kb on - strand at 2480.442 kb on + strand at 2480.549 kb on + strand at 2480.559 kb on + strand at 2480.559 kb on + strand at 2480.559 kb on + strand at 2480.560 kb on - strand at 2480.565 kb on + strand at 2480.565 kb on + strand at 2480.566 kb on - strand at 2480.566 kb on - strand at 2480.589 kb on - strand at 2480.684 kb on + strand at 2480.687 kb on - strand, within CA264_10735 at 2480.687 kb on - strand, within CA264_10735 at 2480.724 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.845 kb on + strand, within CA264_10735 at 2480.846 kb on - strand, within CA264_10735 at 2480.971 kb on + strand, within CA264_10735 at 2480.972 kb on - strand, within CA264_10735 at 2481.049 kb on + strand, within CA264_10735 at 2481.082 kb on - strand, within CA264_10735 at 2481.091 kb on - strand, within CA264_10735 at 2481.163 kb on + strand, within CA264_10735 at 2481.181 kb on + strand, within CA264_10735 at 2481.240 kb on + strand, within CA264_10735
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,477,029 - CA264_10725 0.73 -0.6 2,477,055 + CA264_10725 0.74 -0.8 2,477,056 - CA264_10725 0.74 +1.0 2,477,157 - CA264_10725 0.77 -0.4 2,477,249 + CA264_10725 0.80 -0.1 2,477,255 - CA264_10725 0.80 -0.8 2,477,307 - CA264_10725 0.82 -0.1 2,477,347 - CA264_10725 0.83 +0.4 2,477,371 - CA264_10725 0.84 -0.6 2,477,445 + CA264_10725 0.86 +0.2 2,477,445 + CA264_10725 0.86 -1.1 2,477,446 - CA264_10725 0.86 +0.5 2,477,446 - CA264_10725 0.86 -0.3 2,477,446 - CA264_10725 0.86 +0.2 2,477,551 + CA264_10725 0.89 -0.2 2,477,551 + CA264_10725 0.89 +0.7 2,477,551 + CA264_10725 0.89 +0.2 2,477,552 - CA264_10725 0.89 -0.4 2,477,552 - CA264_10725 0.89 -0.4 2,477,552 - CA264_10725 0.89 -1.3 2,477,552 - CA264_10725 0.89 +0.5 2,477,552 - CA264_10725 0.89 +0.6 2,477,552 - CA264_10725 0.89 -1.9 2,477,555 + CA264_10725 0.89 -1.3 2,477,573 + CA264_10725 0.90 +0.2 2,477,573 + CA264_10725 0.90 +0.7 2,477,574 - +0.5 2,477,576 - +0.2 2,477,606 - +0.6 2,477,606 - -0.3 2,477,606 - -1.9 2,477,606 - -0.3 2,477,625 - -0.7 2,477,625 - -0.2 2,477,638 + +0.5 2,477,638 + +0.2 2,477,768 - +0.3 2,477,768 - -0.2 2,477,810 + -0.0 2,477,810 + +1.0 2,477,840 + -0.3 2,477,840 + -0.5 2,477,840 + +0.6 2,477,858 + +0.6 2,477,901 - -0.1 2,477,914 + +2.0 2,480,310 + -0.3 2,480,311 - -0.1 2,480,316 - +0.3 2,480,347 - -0.8 2,480,366 - -1.0 2,480,372 + -0.3 2,480,372 + -1.2 2,480,373 - -0.6 2,480,380 + +0.1 2,480,380 + +0.2 2,480,380 + -0.3 2,480,389 - +0.3 2,480,389 - -0.0 2,480,407 - -0.4 2,480,428 + -1.7 2,480,429 - -0.2 2,480,429 - -0.2 2,480,435 + -0.4 2,480,435 + -0.6 2,480,435 + -0.8 2,480,436 - -3.2 2,480,442 + -0.3 2,480,549 + +0.7 2,480,559 + -0.7 2,480,559 + -0.1 2,480,559 + -0.3 2,480,560 - -2.2 2,480,565 + -0.6 2,480,565 + -1.2 2,480,566 - -0.7 2,480,566 - -1.2 2,480,589 - -0.4 2,480,684 + -2.6 2,480,687 - CA264_10735 0.10 -1.9 2,480,687 - CA264_10735 0.10 -1.5 2,480,724 + CA264_10735 0.13 -2.1 2,480,845 + CA264_10735 0.24 +0.1 2,480,845 + CA264_10735 0.24 +0.4 2,480,845 + CA264_10735 0.24 -2.4 2,480,846 - CA264_10735 0.24 -0.8 2,480,971 + CA264_10735 0.34 -1.0 2,480,972 - CA264_10735 0.34 +1.2 2,481,049 + CA264_10735 0.41 -1.2 2,481,082 - CA264_10735 0.44 -1.4 2,481,091 - CA264_10735 0.44 -0.4 2,481,163 + CA264_10735 0.51 +0.1 2,481,181 + CA264_10735 0.52 -2.6 2,481,240 + CA264_10735 0.57 -0.8
Or see this region's nucleotide sequence