Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10550 and CA264_10555 are separated by 121 nucleotides CA264_10555 and CA264_10560 are separated by 225 nucleotides
CA264_10550: CA264_10550 - hypothetical protein, at 2,445,041 to 2,446,348
_10550
CA264_10555: CA264_10555 - AraC family transcriptional regulator, at 2,446,470 to 2,447,375
_10555
CA264_10560: CA264_10560 - MBL fold metallo-hydrolase, at 2,447,601 to 2,448,413
_10560
Position (kb)
2446
2447
2448 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2445.671 kb on + strand, within CA264_10550 at 2445.671 kb on + strand, within CA264_10550 at 2445.672 kb on - strand, within CA264_10550 at 2445.674 kb on + strand, within CA264_10550 at 2445.674 kb on + strand, within CA264_10550 at 2445.788 kb on - strand, within CA264_10550 at 2446.001 kb on - strand, within CA264_10550 at 2446.281 kb on + strand at 2446.281 kb on + strand at 2446.282 kb on - strand at 2446.282 kb on - strand at 2446.286 kb on + strand at 2446.286 kb on + strand at 2446.360 kb on + strand at 2446.361 kb on - strand at 2446.361 kb on - strand at 2446.361 kb on - strand at 2446.385 kb on + strand at 2446.407 kb on + strand at 2446.407 kb on + strand at 2446.408 kb on - strand at 2446.412 kb on - strand at 2446.427 kb on + strand at 2446.428 kb on - strand at 2446.443 kb on + strand at 2446.443 kb on + strand at 2446.443 kb on + strand at 2446.444 kb on - strand at 2446.465 kb on - strand at 2446.465 kb on - strand at 2446.467 kb on - strand at 2446.470 kb on - strand at 2446.475 kb on - strand at 2446.475 kb on - strand at 2446.545 kb on + strand at 2446.546 kb on - strand at 2446.611 kb on + strand, within CA264_10555 at 2446.614 kb on + strand, within CA264_10555 at 2446.615 kb on - strand, within CA264_10555 at 2446.633 kb on + strand, within CA264_10555 at 2446.818 kb on + strand, within CA264_10555 at 2446.819 kb on - strand, within CA264_10555 at 2446.835 kb on + strand, within CA264_10555 at 2446.835 kb on + strand, within CA264_10555 at 2446.836 kb on - strand, within CA264_10555 at 2446.836 kb on - strand, within CA264_10555 at 2446.836 kb on - strand, within CA264_10555 at 2446.836 kb on - strand, within CA264_10555 at 2446.987 kb on - strand, within CA264_10555 at 2447.040 kb on + strand, within CA264_10555 at 2447.082 kb on + strand, within CA264_10555 at 2447.082 kb on + strand, within CA264_10555 at 2447.082 kb on + strand, within CA264_10555 at 2447.082 kb on + strand, within CA264_10555 at 2447.082 kb on + strand, within CA264_10555 at 2447.083 kb on - strand, within CA264_10555 at 2447.083 kb on - strand, within CA264_10555 at 2447.083 kb on - strand, within CA264_10555 at 2447.106 kb on + strand, within CA264_10555 at 2447.106 kb on + strand, within CA264_10555 at 2447.107 kb on - strand, within CA264_10555 at 2447.107 kb on - strand, within CA264_10555 at 2447.109 kb on + strand, within CA264_10555 at 2447.109 kb on + strand, within CA264_10555 at 2447.110 kb on - strand, within CA264_10555 at 2447.163 kb on + strand, within CA264_10555 at 2447.164 kb on - strand, within CA264_10555 at 2447.164 kb on - strand, within CA264_10555 at 2447.248 kb on + strand, within CA264_10555 at 2447.248 kb on + strand, within CA264_10555 at 2447.289 kb on + strand at 2447.307 kb on - strand at 2447.374 kb on - strand at 2447.449 kb on + strand at 2447.450 kb on - strand at 2447.480 kb on - strand at 2447.530 kb on + strand at 2447.530 kb on + strand at 2447.531 kb on - strand at 2447.576 kb on + strand at 2447.870 kb on - strand, within CA264_10560 at 2447.913 kb on + strand, within CA264_10560 at 2447.949 kb on - strand, within CA264_10560 at 2447.949 kb on - strand, within CA264_10560 at 2447.964 kb on + strand, within CA264_10560 at 2447.967 kb on + strand, within CA264_10560 at 2447.968 kb on - strand, within CA264_10560 at 2448.040 kb on + strand, within CA264_10560 at 2448.041 kb on - strand, within CA264_10560 at 2448.198 kb on + strand, within CA264_10560 at 2448.199 kb on - strand, within CA264_10560 at 2448.230 kb on + strand, within CA264_10560 at 2448.230 kb on + strand, within CA264_10560 at 2448.230 kb on + strand, within CA264_10560 at 2448.231 kb on - strand, within CA264_10560 at 2448.231 kb on - strand, within CA264_10560 at 2448.231 kb on - strand, within CA264_10560 at 2448.231 kb on - strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.234 kb on + strand, within CA264_10560 at 2448.235 kb on - strand, within CA264_10560 at 2448.235 kb on - strand, within CA264_10560 at 2448.235 kb on - strand, within CA264_10560 at 2448.240 kb on + strand, within CA264_10560 at 2448.282 kb on - strand, within CA264_10560 at 2448.282 kb on - strand, within CA264_10560 at 2448.283 kb on + strand, within CA264_10560 at 2448.283 kb on + strand, within CA264_10560
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,445,671 + CA264_10550 0.48 +0.3 2,445,671 + CA264_10550 0.48 -0.4 2,445,672 - CA264_10550 0.48 -0.2 2,445,674 + CA264_10550 0.48 -0.6 2,445,674 + CA264_10550 0.48 -1.0 2,445,788 - CA264_10550 0.57 +0.1 2,446,001 - CA264_10550 0.73 -1.5 2,446,281 + -0.2 2,446,281 + -0.7 2,446,282 - -1.2 2,446,282 - -0.2 2,446,286 + +0.1 2,446,286 + +0.2 2,446,360 + -0.9 2,446,361 - -0.1 2,446,361 - -1.2 2,446,361 - -0.3 2,446,385 + +0.6 2,446,407 + +0.3 2,446,407 + -0.4 2,446,408 - +2.1 2,446,412 - -0.8 2,446,427 + -1.0 2,446,428 - +0.7 2,446,443 + -0.2 2,446,443 + -0.3 2,446,443 + +0.4 2,446,444 - +0.1 2,446,465 - -0.7 2,446,465 - -0.2 2,446,467 - -0.1 2,446,470 - +0.8 2,446,475 - -0.1 2,446,475 - -0.4 2,446,545 + +1.8 2,446,546 - -0.1 2,446,611 + CA264_10555 0.16 -0.1 2,446,614 + CA264_10555 0.16 -0.2 2,446,615 - CA264_10555 0.16 -0.1 2,446,633 + CA264_10555 0.18 -0.2 2,446,818 + CA264_10555 0.38 +2.1 2,446,819 - CA264_10555 0.39 +0.3 2,446,835 + CA264_10555 0.40 -0.4 2,446,835 + CA264_10555 0.40 -0.6 2,446,836 - CA264_10555 0.40 +0.2 2,446,836 - CA264_10555 0.40 -1.4 2,446,836 - CA264_10555 0.40 -0.2 2,446,836 - CA264_10555 0.40 +2.8 2,446,987 - CA264_10555 0.57 -0.3 2,447,040 + CA264_10555 0.63 +0.6 2,447,082 + CA264_10555 0.68 -0.0 2,447,082 + CA264_10555 0.68 -0.8 2,447,082 + CA264_10555 0.68 +0.4 2,447,082 + CA264_10555 0.68 -0.9 2,447,082 + CA264_10555 0.68 -0.7 2,447,083 - CA264_10555 0.68 +0.7 2,447,083 - CA264_10555 0.68 +0.1 2,447,083 - CA264_10555 0.68 -0.8 2,447,106 + CA264_10555 0.70 +0.1 2,447,106 + CA264_10555 0.70 -0.1 2,447,107 - CA264_10555 0.70 -0.2 2,447,107 - CA264_10555 0.70 -0.7 2,447,109 + CA264_10555 0.71 -0.3 2,447,109 + CA264_10555 0.71 -0.3 2,447,110 - CA264_10555 0.71 -1.0 2,447,163 + CA264_10555 0.76 +0.3 2,447,164 - CA264_10555 0.77 -0.9 2,447,164 - CA264_10555 0.77 -0.3 2,447,248 + CA264_10555 0.86 -0.3 2,447,248 + CA264_10555 0.86 +0.3 2,447,289 + -1.4 2,447,307 - +0.3 2,447,374 - -0.8 2,447,449 + -0.3 2,447,450 - -0.1 2,447,480 - +0.4 2,447,530 + -0.6 2,447,530 + +2.1 2,447,531 - -0.3 2,447,576 + -0.2 2,447,870 - CA264_10560 0.33 -0.2 2,447,913 + CA264_10560 0.38 +0.2 2,447,949 - CA264_10560 0.43 +0.7 2,447,949 - CA264_10560 0.43 -0.7 2,447,964 + CA264_10560 0.45 -0.7 2,447,967 + CA264_10560 0.45 -0.4 2,447,968 - CA264_10560 0.45 +0.3 2,448,040 + CA264_10560 0.54 -0.7 2,448,041 - CA264_10560 0.54 -0.3 2,448,198 + CA264_10560 0.73 -0.1 2,448,199 - CA264_10560 0.74 +1.6 2,448,230 + CA264_10560 0.77 +0.6 2,448,230 + CA264_10560 0.77 +0.0 2,448,230 + CA264_10560 0.77 +0.7 2,448,231 - CA264_10560 0.77 -0.4 2,448,231 - CA264_10560 0.77 -0.2 2,448,231 - CA264_10560 0.77 -0.7 2,448,231 - CA264_10560 0.77 -2.9 2,448,234 + CA264_10560 0.78 +0.6 2,448,234 + CA264_10560 0.78 +0.1 2,448,234 + CA264_10560 0.78 +0.1 2,448,234 + CA264_10560 0.78 -0.8 2,448,234 + CA264_10560 0.78 +0.1 2,448,234 + CA264_10560 0.78 -0.9 2,448,235 - CA264_10560 0.78 -0.3 2,448,235 - CA264_10560 0.78 -0.5 2,448,235 - CA264_10560 0.78 +0.3 2,448,240 + CA264_10560 0.79 +0.9 2,448,282 - CA264_10560 0.84 +0.0 2,448,282 - CA264_10560 0.84 -0.7 2,448,283 + CA264_10560 0.84 -2.2 2,448,283 + CA264_10560 0.84 +0.1
Or see this region's nucleotide sequence