Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10540

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10530 and CA264_10535 are separated by 424 nucleotidesCA264_10535 and CA264_10540 are separated by 16 nucleotidesCA264_10540 and CA264_10545 are separated by 72 nucleotides CA264_10530: CA264_10530 - hypothetical protein, at 2,440,105 to 2,440,842 _10530 CA264_10535: CA264_10535 - cyclic pyranopterin monophosphate synthase MoaC, at 2,441,267 to 2,441,743 _10535 CA264_10540: CA264_10540 - molybdopterin molybdenumtransferase MoeA, at 2,441,760 to 2,442,968 _10540 CA264_10545: CA264_10545 - GTP 3',8-cyclase MoaA, at 2,443,041 to 2,444,030 _10545 Position (kb) 2441 2442 2443Strain fitness (log2 ratio) -2 -1 0 1 2at 2440.855 kb on + strandat 2440.856 kb on - strandat 2440.909 kb on + strandat 2440.909 kb on + strandat 2440.910 kb on - strandat 2441.002 kb on - strandat 2441.118 kb on + strandat 2441.118 kb on + strandat 2441.118 kb on + strandat 2441.122 kb on + strandat 2441.126 kb on + strandat 2441.127 kb on - strandat 2441.181 kb on + strandat 2441.206 kb on + strandat 2441.268 kb on + strandat 2441.268 kb on + strandat 2441.268 kb on + strandat 2441.269 kb on - strandat 2441.269 kb on - strandat 2441.269 kb on - strandat 2441.310 kb on - strandat 2441.362 kb on - strand, within CA264_10535at 2441.479 kb on + strand, within CA264_10535at 2441.479 kb on + strand, within CA264_10535at 2441.690 kb on + strand, within CA264_10535at 2441.743 kb on + strandat 2441.743 kb on + strandat 2441.743 kb on + strandat 2441.744 kb on - strandat 2441.745 kb on + strandat 2441.745 kb on + strandat 2441.745 kb on + strandat 2441.745 kb on + strandat 2441.746 kb on - strandat 2441.746 kb on - strandat 2441.746 kb on - strandat 2441.746 kb on - strandat 2441.749 kb on + strandat 2441.770 kb on - strandat 2441.778 kb on - strandat 2441.810 kb on + strandat 2441.811 kb on - strandat 2441.811 kb on - strandat 2441.856 kb on + strandat 2441.926 kb on - strand, within CA264_10540at 2441.928 kb on - strand, within CA264_10540at 2441.931 kb on + strand, within CA264_10540at 2441.967 kb on - strand, within CA264_10540at 2442.044 kb on + strand, within CA264_10540at 2442.063 kb on + strand, within CA264_10540at 2442.064 kb on - strand, within CA264_10540at 2442.209 kb on - strand, within CA264_10540at 2442.209 kb on - strand, within CA264_10540at 2442.214 kb on + strand, within CA264_10540at 2442.215 kb on - strand, within CA264_10540at 2442.215 kb on - strand, within CA264_10540at 2442.256 kb on + strand, within CA264_10540at 2442.257 kb on - strand, within CA264_10540at 2442.257 kb on - strand, within CA264_10540at 2442.338 kb on - strand, within CA264_10540at 2442.338 kb on - strand, within CA264_10540at 2442.338 kb on - strand, within CA264_10540at 2442.357 kb on + strand, within CA264_10540at 2442.364 kb on + strand, within CA264_10540at 2442.364 kb on + strand, within CA264_10540at 2442.365 kb on - strand, within CA264_10540at 2442.365 kb on - strand, within CA264_10540at 2442.497 kb on + strand, within CA264_10540at 2442.502 kb on - strand, within CA264_10540at 2442.518 kb on + strand, within CA264_10540at 2442.721 kb on - strand, within CA264_10540at 2442.832 kb on + strand, within CA264_10540at 2442.975 kb on - strandat 2443.011 kb on + strandat 2443.011 kb on + strandat 2443.019 kb on - strandat 2443.288 kb on + strand, within CA264_10545at 2443.296 kb on + strand, within CA264_10545at 2443.305 kb on + strand, within CA264_10545at 2443.306 kb on - strand, within CA264_10545at 2443.306 kb on - strand, within CA264_10545at 2443.329 kb on - strand, within CA264_10545at 2443.439 kb on + strand, within CA264_10545at 2443.559 kb on + strand, within CA264_10545at 2443.559 kb on + strand, within CA264_10545at 2443.559 kb on + strand, within CA264_10545at 2443.560 kb on - strand, within CA264_10545at 2443.756 kb on - strand, within CA264_10545at 2443.838 kb on + strand, within CA264_10545at 2443.838 kb on + strand, within CA264_10545at 2443.838 kb on + strand, within CA264_10545at 2443.842 kb on + strand, within CA264_10545at 2443.897 kb on + strand, within CA264_10545at 2443.946 kb on + strandat 2443.946 kb on + strandat 2443.947 kb on - strandat 2443.951 kb on + strandat 2443.951 kb on + strandat 2443.951 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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2,440,855 + +0.3
2,440,856 - -0.9
2,440,909 + -0.1
2,440,909 + -0.1
2,440,910 - +0.7
2,441,002 - -1.9
2,441,118 + -0.1
2,441,118 + -0.4
2,441,118 + +0.3
2,441,122 + +0.1
2,441,126 + -0.2
2,441,127 - -1.3
2,441,181 + -1.1
2,441,206 + +0.3
2,441,268 + -0.4
2,441,268 + -1.0
2,441,268 + -0.2
2,441,269 - -1.6
2,441,269 - -1.4
2,441,269 - +0.0
2,441,310 - -0.2
2,441,362 - CA264_10535 0.20 -0.0
2,441,479 + CA264_10535 0.44 +0.2
2,441,479 + CA264_10535 0.44 +0.3
2,441,690 + CA264_10535 0.89 -0.3
2,441,743 + -0.0
2,441,743 + -1.5
2,441,743 + +0.7
2,441,744 - +0.8
2,441,745 + +0.0
2,441,745 + +1.1
2,441,745 + -0.3
2,441,745 + -0.6
2,441,746 - -0.1
2,441,746 - +0.1
2,441,746 - +0.9
2,441,746 - -0.6
2,441,749 + +0.7
2,441,770 - -0.7
2,441,778 - -0.3
2,441,810 + +0.3
2,441,811 - +0.0
2,441,811 - -0.6
2,441,856 + -0.3
2,441,926 - CA264_10540 0.14 -0.8
2,441,928 - CA264_10540 0.14 +0.4
2,441,931 + CA264_10540 0.14 -0.3
2,441,967 - CA264_10540 0.17 +0.3
2,442,044 + CA264_10540 0.23 -0.1
2,442,063 + CA264_10540 0.25 +0.4
2,442,064 - CA264_10540 0.25 -0.5
2,442,209 - CA264_10540 0.37 -0.1
2,442,209 - CA264_10540 0.37 +0.1
2,442,214 + CA264_10540 0.38 -0.6
2,442,215 - CA264_10540 0.38 -0.5
2,442,215 - CA264_10540 0.38 -0.1
2,442,256 + CA264_10540 0.41 -1.5
2,442,257 - CA264_10540 0.41 +2.0
2,442,257 - CA264_10540 0.41 -0.4
2,442,338 - CA264_10540 0.48 -1.3
2,442,338 - CA264_10540 0.48 +0.6
2,442,338 - CA264_10540 0.48 -0.3
2,442,357 + CA264_10540 0.49 -0.2
2,442,364 + CA264_10540 0.50 -0.1
2,442,364 + CA264_10540 0.50 -0.3
2,442,365 - CA264_10540 0.50 -0.2
2,442,365 - CA264_10540 0.50 +0.4
2,442,497 + CA264_10540 0.61 -0.3
2,442,502 - CA264_10540 0.61 -1.0
2,442,518 + CA264_10540 0.63 +0.8
2,442,721 - CA264_10540 0.79 +0.7
2,442,832 + CA264_10540 0.89 -0.7
2,442,975 - +1.5
2,443,011 + -0.3
2,443,011 + -1.0
2,443,019 - +0.3
2,443,288 + CA264_10545 0.25 +0.3
2,443,296 + CA264_10545 0.26 -1.0
2,443,305 + CA264_10545 0.27 -0.5
2,443,306 - CA264_10545 0.27 -0.4
2,443,306 - CA264_10545 0.27 -0.6
2,443,329 - CA264_10545 0.29 +0.5
2,443,439 + CA264_10545 0.40 +0.4
2,443,559 + CA264_10545 0.52 +0.7
2,443,559 + CA264_10545 0.52 -0.2
2,443,559 + CA264_10545 0.52 +0.3
2,443,560 - CA264_10545 0.52 +0.3
2,443,756 - CA264_10545 0.72 +0.5
2,443,838 + CA264_10545 0.81 -0.4
2,443,838 + CA264_10545 0.81 +1.0
2,443,838 + CA264_10545 0.81 -0.1
2,443,842 + CA264_10545 0.81 -0.1
2,443,897 + CA264_10545 0.86 -0.5
2,443,946 + +1.1
2,443,946 + +1.5
2,443,947 - -0.0
2,443,951 + -1.3
2,443,951 + +0.6
2,443,951 + -0.4

Or see this region's nucleotide sequence