Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09650 and CA264_09655 are separated by 73 nucleotides CA264_09655 and CA264_09660 are separated by 117 nucleotides CA264_09660 and CA264_09665 are separated by 42 nucleotides CA264_09665 and CA264_09670 are separated by 285 nucleotides
CA264_09650: CA264_09650 - hypothetical protein, at 2,246,971 to 2,247,432
_09650
CA264_09655: CA264_09655 - SMI1/KNR4 family protein, at 2,247,506 to 2,247,943
_09655
CA264_09660: CA264_09660 - hypothetical protein, at 2,248,061 to 2,248,717
_09660
CA264_09665: CA264_09665 - hypothetical protein, at 2,248,760 to 2,248,945
_09665
CA264_09670: CA264_09670 - hypothetical protein, at 2,249,231 to 2,249,671
_09670
Position (kb)
2248
2249 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2247.074 kb on - strand, within CA264_09650 at 2247.079 kb on + strand, within CA264_09650 at 2247.109 kb on - strand, within CA264_09650 at 2247.109 kb on - strand, within CA264_09650 at 2247.174 kb on - strand, within CA264_09650 at 2247.174 kb on - strand, within CA264_09650 at 2247.182 kb on - strand, within CA264_09650 at 2247.282 kb on + strand, within CA264_09650 at 2247.366 kb on - strand, within CA264_09650 at 2247.443 kb on - strand at 2247.507 kb on + strand at 2247.580 kb on + strand, within CA264_09655 at 2247.580 kb on + strand, within CA264_09655 at 2247.580 kb on + strand, within CA264_09655 at 2247.583 kb on - strand, within CA264_09655 at 2247.583 kb on - strand, within CA264_09655 at 2247.583 kb on - strand, within CA264_09655 at 2247.583 kb on - strand, within CA264_09655 at 2247.584 kb on + strand, within CA264_09655 at 2247.584 kb on + strand, within CA264_09655 at 2247.585 kb on - strand, within CA264_09655 at 2247.585 kb on - strand, within CA264_09655 at 2247.592 kb on - strand, within CA264_09655 at 2247.592 kb on - strand, within CA264_09655 at 2247.656 kb on + strand, within CA264_09655 at 2247.666 kb on - strand, within CA264_09655 at 2247.683 kb on - strand, within CA264_09655 at 2247.689 kb on + strand, within CA264_09655 at 2247.690 kb on - strand, within CA264_09655 at 2247.697 kb on + strand, within CA264_09655 at 2247.698 kb on - strand, within CA264_09655 at 2247.720 kb on - strand, within CA264_09655 at 2247.721 kb on + strand, within CA264_09655 at 2247.722 kb on - strand, within CA264_09655 at 2247.722 kb on - strand, within CA264_09655 at 2247.722 kb on - strand, within CA264_09655 at 2247.726 kb on + strand, within CA264_09655 at 2247.726 kb on + strand, within CA264_09655 at 2247.827 kb on - strand, within CA264_09655 at 2247.828 kb on + strand, within CA264_09655 at 2247.912 kb on + strand at 2247.913 kb on - strand at 2247.913 kb on - strand at 2247.924 kb on - strand at 2247.925 kb on + strand at 2247.925 kb on + strand at 2247.932 kb on + strand at 2247.932 kb on + strand at 2247.933 kb on - strand at 2247.933 kb on - strand at 2247.944 kb on - strand at 2247.948 kb on + strand at 2247.948 kb on + strand at 2247.949 kb on - strand at 2247.949 kb on - strand at 2247.957 kb on + strand at 2247.966 kb on + strand at 2247.974 kb on - strand at 2248.052 kb on + strand at 2248.063 kb on - strand at 2248.083 kb on - strand at 2248.084 kb on + strand at 2248.114 kb on + strand at 2248.122 kb on + strand at 2248.122 kb on + strand at 2248.123 kb on - strand at 2248.148 kb on - strand, within CA264_09660 at 2248.156 kb on + strand, within CA264_09660 at 2248.158 kb on + strand, within CA264_09660 at 2248.166 kb on + strand, within CA264_09660 at 2248.166 kb on + strand, within CA264_09660 at 2248.166 kb on + strand, within CA264_09660 at 2248.166 kb on + strand, within CA264_09660 at 2248.167 kb on - strand, within CA264_09660 at 2248.168 kb on + strand, within CA264_09660 at 2248.168 kb on + strand, within CA264_09660 at 2248.169 kb on - strand, within CA264_09660 at 2248.169 kb on - strand, within CA264_09660 at 2248.169 kb on - strand, within CA264_09660 at 2248.176 kb on + strand, within CA264_09660 at 2248.202 kb on + strand, within CA264_09660 at 2248.203 kb on - strand, within CA264_09660 at 2248.206 kb on + strand, within CA264_09660 at 2248.212 kb on - strand, within CA264_09660 at 2248.216 kb on + strand, within CA264_09660 at 2248.217 kb on - strand, within CA264_09660 at 2248.219 kb on - strand, within CA264_09660 at 2248.253 kb on + strand, within CA264_09660 at 2248.275 kb on - strand, within CA264_09660 at 2248.275 kb on - strand, within CA264_09660 at 2248.280 kb on + strand, within CA264_09660 at 2248.298 kb on + strand, within CA264_09660 at 2248.298 kb on + strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.299 kb on - strand, within CA264_09660 at 2248.301 kb on + strand, within CA264_09660 at 2248.301 kb on + strand, within CA264_09660 at 2248.302 kb on - strand, within CA264_09660 at 2248.302 kb on - strand, within CA264_09660 at 2248.329 kb on + strand, within CA264_09660 at 2248.330 kb on - strand, within CA264_09660 at 2248.388 kb on + strand, within CA264_09660 at 2248.389 kb on - strand, within CA264_09660 at 2248.396 kb on + strand, within CA264_09660 at 2248.409 kb on - strand, within CA264_09660 at 2248.410 kb on + strand, within CA264_09660 at 2248.419 kb on + strand, within CA264_09660 at 2248.438 kb on - strand, within CA264_09660 at 2248.438 kb on - strand, within CA264_09660 at 2248.470 kb on + strand, within CA264_09660 at 2248.480 kb on + strand, within CA264_09660 at 2248.480 kb on + strand, within CA264_09660 at 2248.487 kb on - strand, within CA264_09660 at 2248.493 kb on - strand, within CA264_09660 at 2248.493 kb on - strand, within CA264_09660 at 2248.521 kb on + strand, within CA264_09660 at 2248.522 kb on - strand, within CA264_09660 at 2248.522 kb on - strand, within CA264_09660 at 2248.522 kb on - strand, within CA264_09660 at 2248.522 kb on - strand, within CA264_09660 at 2248.562 kb on + strand, within CA264_09660 at 2248.562 kb on + strand, within CA264_09660 at 2248.562 kb on + strand, within CA264_09660 at 2248.563 kb on - strand, within CA264_09660 at 2248.563 kb on - strand, within CA264_09660 at 2248.563 kb on - strand, within CA264_09660 at 2248.563 kb on - strand, within CA264_09660 at 2248.563 kb on - strand, within CA264_09660 at 2248.564 kb on + strand, within CA264_09660 at 2248.564 kb on + strand, within CA264_09660 at 2248.565 kb on - strand, within CA264_09660 at 2248.571 kb on + strand, within CA264_09660 at 2248.571 kb on + strand, within CA264_09660 at 2248.571 kb on + strand, within CA264_09660 at 2248.571 kb on + strand, within CA264_09660 at 2248.571 kb on + strand, within CA264_09660 at 2248.573 kb on + strand, within CA264_09660 at 2248.574 kb on - strand, within CA264_09660 at 2248.574 kb on - strand, within CA264_09660 at 2248.575 kb on + strand, within CA264_09660 at 2248.576 kb on - strand, within CA264_09660 at 2248.576 kb on - strand, within CA264_09660 at 2248.582 kb on + strand, within CA264_09660 at 2248.617 kb on + strand, within CA264_09660 at 2248.618 kb on - strand, within CA264_09660 at 2248.635 kb on - strand, within CA264_09660 at 2248.723 kb on - strand at 2248.723 kb on - strand at 2248.741 kb on - strand at 2248.741 kb on - strand at 2248.743 kb on + strand at 2248.744 kb on - strand at 2248.744 kb on - strand at 2248.752 kb on + strand at 2248.756 kb on + strand at 2248.756 kb on + strand at 2248.756 kb on + strand at 2248.761 kb on + strand at 2248.762 kb on - strand at 2248.824 kb on - strand, within CA264_09665 at 2248.891 kb on + strand, within CA264_09665 at 2248.892 kb on - strand, within CA264_09665 at 2248.952 kb on + strand at 2248.964 kb on - strand at 2248.965 kb on + strand at 2248.965 kb on + strand at 2248.965 kb on + strand at 2248.966 kb on - strand at 2248.966 kb on - strand at 2248.966 kb on - strand at 2249.011 kb on - strand at 2249.046 kb on - strand at 2249.046 kb on - strand at 2249.049 kb on - strand at 2249.063 kb on - strand at 2249.063 kb on - strand at 2249.086 kb on - strand at 2249.138 kb on + strand at 2249.166 kb on + strand at 2249.185 kb on - strand at 2249.223 kb on - strand at 2249.267 kb on + strand at 2249.268 kb on - strand at 2249.275 kb on - strand, within CA264_09670 at 2249.293 kb on + strand, within CA264_09670 at 2249.307 kb on - strand, within CA264_09670 at 2249.310 kb on + strand, within CA264_09670 at 2249.311 kb on - strand, within CA264_09670 at 2249.311 kb on - strand, within CA264_09670 at 2249.362 kb on - strand, within CA264_09670 at 2249.396 kb on - strand, within CA264_09670 at 2249.415 kb on + strand, within CA264_09670 at 2249.416 kb on - strand, within CA264_09670 at 2249.426 kb on + strand, within CA264_09670 at 2249.426 kb on + strand, within CA264_09670 at 2249.440 kb on + strand, within CA264_09670 at 2249.556 kb on - strand, within CA264_09670 at 2249.556 kb on - strand, within CA264_09670 at 2249.574 kb on + strand, within CA264_09670 at 2249.574 kb on + strand, within CA264_09670 at 2249.575 kb on - strand, within CA264_09670 at 2249.579 kb on + strand, within CA264_09670 at 2249.595 kb on - strand, within CA264_09670 at 2249.651 kb on + strand at 2249.651 kb on + strand at 2249.660 kb on - strand at 2249.673 kb on + strand at 2249.676 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,247,074 - CA264_09650 0.22 -0.9 2,247,079 + CA264_09650 0.23 -0.4 2,247,109 - CA264_09650 0.30 -1.4 2,247,109 - CA264_09650 0.30 +0.3 2,247,174 - CA264_09650 0.44 -0.5 2,247,174 - CA264_09650 0.44 -0.2 2,247,182 - CA264_09650 0.46 +0.0 2,247,282 + CA264_09650 0.67 -0.1 2,247,366 - CA264_09650 0.85 +0.5 2,247,443 - -0.3 2,247,507 + -1.8 2,247,580 + CA264_09655 0.17 -0.9 2,247,580 + CA264_09655 0.17 +1.2 2,247,580 + CA264_09655 0.17 -0.2 2,247,583 - CA264_09655 0.18 -0.3 2,247,583 - CA264_09655 0.18 +1.0 2,247,583 - CA264_09655 0.18 -0.9 2,247,583 - CA264_09655 0.18 +1.0 2,247,584 + CA264_09655 0.18 -0.6 2,247,584 + CA264_09655 0.18 -1.2 2,247,585 - CA264_09655 0.18 +1.5 2,247,585 - CA264_09655 0.18 -0.5 2,247,592 - CA264_09655 0.20 -0.8 2,247,592 - CA264_09655 0.20 -0.4 2,247,656 + CA264_09655 0.34 +1.2 2,247,666 - CA264_09655 0.37 -2.1 2,247,683 - CA264_09655 0.40 -0.8 2,247,689 + CA264_09655 0.42 -0.3 2,247,690 - CA264_09655 0.42 -0.7 2,247,697 + CA264_09655 0.44 -0.2 2,247,698 - CA264_09655 0.44 -0.2 2,247,720 - CA264_09655 0.49 -0.3 2,247,721 + CA264_09655 0.49 -1.6 2,247,722 - CA264_09655 0.49 -0.3 2,247,722 - CA264_09655 0.49 -0.8 2,247,722 - CA264_09655 0.49 -1.0 2,247,726 + CA264_09655 0.50 +0.4 2,247,726 + CA264_09655 0.50 -0.4 2,247,827 - CA264_09655 0.73 -1.1 2,247,828 + CA264_09655 0.74 -0.8 2,247,912 + -0.5 2,247,913 - -0.7 2,247,913 - -0.7 2,247,924 - -0.2 2,247,925 + -1.4 2,247,925 + +0.0 2,247,932 + +0.2 2,247,932 + -0.2 2,247,933 - -0.4 2,247,933 - -0.3 2,247,944 - -1.2 2,247,948 + -0.4 2,247,948 + -0.8 2,247,949 - +0.3 2,247,949 - +0.1 2,247,957 + +0.1 2,247,966 + -0.8 2,247,974 - -0.3 2,248,052 + +0.0 2,248,063 - +1.7 2,248,083 - -0.4 2,248,084 + -1.4 2,248,114 + -0.0 2,248,122 + -0.3 2,248,122 + -0.9 2,248,123 - -0.5 2,248,148 - CA264_09660 0.13 -1.0 2,248,156 + CA264_09660 0.14 -0.5 2,248,158 + CA264_09660 0.15 -0.6 2,248,166 + CA264_09660 0.16 -1.3 2,248,166 + CA264_09660 0.16 -0.2 2,248,166 + CA264_09660 0.16 -0.4 2,248,166 + CA264_09660 0.16 +0.2 2,248,167 - CA264_09660 0.16 -0.7 2,248,168 + CA264_09660 0.16 +0.1 2,248,168 + CA264_09660 0.16 -1.2 2,248,169 - CA264_09660 0.16 +1.6 2,248,169 - CA264_09660 0.16 -0.3 2,248,169 - CA264_09660 0.16 -0.4 2,248,176 + CA264_09660 0.18 -0.1 2,248,202 + CA264_09660 0.21 +0.2 2,248,203 - CA264_09660 0.22 -0.1 2,248,206 + CA264_09660 0.22 +0.1 2,248,212 - CA264_09660 0.23 -1.2 2,248,216 + CA264_09660 0.24 -0.2 2,248,217 - CA264_09660 0.24 -1.6 2,248,219 - CA264_09660 0.24 -1.0 2,248,253 + CA264_09660 0.29 -0.1 2,248,275 - CA264_09660 0.33 -0.2 2,248,275 - CA264_09660 0.33 -1.4 2,248,280 + CA264_09660 0.33 +0.1 2,248,298 + CA264_09660 0.36 -1.2 2,248,298 + CA264_09660 0.36 -0.3 2,248,299 - CA264_09660 0.36 -1.0 2,248,299 - CA264_09660 0.36 +0.1 2,248,299 - CA264_09660 0.36 -0.7 2,248,299 - CA264_09660 0.36 -0.3 2,248,299 - CA264_09660 0.36 -0.6 2,248,299 - CA264_09660 0.36 +0.1 2,248,301 + CA264_09660 0.37 -0.1 2,248,301 + CA264_09660 0.37 +0.4 2,248,302 - CA264_09660 0.37 -0.3 2,248,302 - CA264_09660 0.37 +0.3 2,248,329 + CA264_09660 0.41 -1.1 2,248,330 - CA264_09660 0.41 -0.8 2,248,388 + CA264_09660 0.50 -0.8 2,248,389 - CA264_09660 0.50 -1.3 2,248,396 + CA264_09660 0.51 -0.5 2,248,409 - CA264_09660 0.53 -1.0 2,248,410 + CA264_09660 0.53 -0.1 2,248,419 + CA264_09660 0.54 -0.4 2,248,438 - CA264_09660 0.57 +0.4 2,248,438 - CA264_09660 0.57 -1.1 2,248,470 + CA264_09660 0.62 -0.5 2,248,480 + CA264_09660 0.64 +0.1 2,248,480 + CA264_09660 0.64 -0.5 2,248,487 - CA264_09660 0.65 +0.4 2,248,493 - CA264_09660 0.66 -0.3 2,248,493 - CA264_09660 0.66 -1.2 2,248,521 + CA264_09660 0.70 -0.2 2,248,522 - CA264_09660 0.70 -0.9 2,248,522 - CA264_09660 0.70 +0.6 2,248,522 - CA264_09660 0.70 -0.5 2,248,522 - CA264_09660 0.70 -1.5 2,248,562 + CA264_09660 0.76 -0.3 2,248,562 + CA264_09660 0.76 -0.8 2,248,562 + CA264_09660 0.76 +0.3 2,248,563 - CA264_09660 0.76 -0.0 2,248,563 - CA264_09660 0.76 -0.9 2,248,563 - CA264_09660 0.76 -0.4 2,248,563 - CA264_09660 0.76 -0.6 2,248,563 - CA264_09660 0.76 -0.4 2,248,564 + CA264_09660 0.77 -1.3 2,248,564 + CA264_09660 0.77 +0.2 2,248,565 - CA264_09660 0.77 -0.4 2,248,571 + CA264_09660 0.78 -0.6 2,248,571 + CA264_09660 0.78 -0.3 2,248,571 + CA264_09660 0.78 +0.4 2,248,571 + CA264_09660 0.78 -0.3 2,248,571 + CA264_09660 0.78 +0.6 2,248,573 + CA264_09660 0.78 -0.3 2,248,574 - CA264_09660 0.78 -0.3 2,248,574 - CA264_09660 0.78 -0.1 2,248,575 + CA264_09660 0.78 +0.0 2,248,576 - CA264_09660 0.78 -0.4 2,248,576 - CA264_09660 0.78 -0.0 2,248,582 + CA264_09660 0.79 -0.0 2,248,617 + CA264_09660 0.85 +0.2 2,248,618 - CA264_09660 0.85 +0.5 2,248,635 - CA264_09660 0.87 +1.0 2,248,723 - -0.6 2,248,723 - +0.0 2,248,741 - -0.4 2,248,741 - -1.0 2,248,743 + +0.1 2,248,744 - -0.3 2,248,744 - -0.6 2,248,752 + -0.4 2,248,756 + -0.5 2,248,756 + -0.2 2,248,756 + +0.6 2,248,761 + -0.7 2,248,762 - -0.5 2,248,824 - CA264_09665 0.34 -1.1 2,248,891 + CA264_09665 0.70 -0.3 2,248,892 - CA264_09665 0.71 -0.8 2,248,952 + -0.8 2,248,964 - -0.2 2,248,965 + +0.4 2,248,965 + -0.4 2,248,965 + +1.8 2,248,966 - -0.4 2,248,966 - -0.5 2,248,966 - -1.0 2,249,011 - -0.3 2,249,046 - +0.2 2,249,046 - -0.9 2,249,049 - -0.0 2,249,063 - -1.2 2,249,063 - -0.4 2,249,086 - -0.5 2,249,138 + +0.0 2,249,166 + -1.4 2,249,185 - -0.0 2,249,223 - -0.9 2,249,267 + -0.9 2,249,268 - -0.3 2,249,275 - CA264_09670 0.10 -1.8 2,249,293 + CA264_09670 0.14 +2.2 2,249,307 - CA264_09670 0.17 -0.8 2,249,310 + CA264_09670 0.18 -0.0 2,249,311 - CA264_09670 0.18 -0.5 2,249,311 - CA264_09670 0.18 -0.0 2,249,362 - CA264_09670 0.30 -0.2 2,249,396 - CA264_09670 0.37 -0.9 2,249,415 + CA264_09670 0.42 +0.9 2,249,416 - CA264_09670 0.42 +0.3 2,249,426 + CA264_09670 0.44 -0.3 2,249,426 + CA264_09670 0.44 +0.8 2,249,440 + CA264_09670 0.47 -1.1 2,249,556 - CA264_09670 0.74 -0.8 2,249,556 - CA264_09670 0.74 -0.9 2,249,574 + CA264_09670 0.78 +0.4 2,249,574 + CA264_09670 0.78 -0.4 2,249,575 - CA264_09670 0.78 +0.1 2,249,579 + CA264_09670 0.79 -0.5 2,249,595 - CA264_09670 0.83 -0.5 2,249,651 + +0.2 2,249,651 + -0.3 2,249,660 - -0.5 2,249,673 + +0.5 2,249,676 + -0.3
Or see this region's nucleotide sequence