Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09445 and CA264_09450 are separated by 150 nucleotides CA264_09450 and CA264_09455 are separated by 106 nucleotides
CA264_09445: CA264_09445 - 3-isopropylmalate dehydrogenase, at 2,207,095 to 2,208,216
_09445
CA264_09450: CA264_09450 - hypothetical protein, at 2,208,367 to 2,208,615
_09450
CA264_09455: CA264_09455 - LysR family transcriptional regulator, at 2,208,722 to 2,209,615
_09455
Position (kb)
2208
2209 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2207.437 kb on + strand, within CA264_09445 at 2207.550 kb on - strand, within CA264_09445 at 2207.578 kb on + strand, within CA264_09445 at 2207.578 kb on + strand, within CA264_09445 at 2207.603 kb on + strand, within CA264_09445 at 2207.657 kb on + strand, within CA264_09445 at 2207.735 kb on + strand, within CA264_09445 at 2207.736 kb on - strand, within CA264_09445 at 2207.805 kb on + strand, within CA264_09445 at 2208.067 kb on - strand, within CA264_09445 at 2208.078 kb on - strand, within CA264_09445 at 2208.090 kb on - strand, within CA264_09445 at 2208.090 kb on - strand, within CA264_09445 at 2208.090 kb on - strand, within CA264_09445 at 2208.126 kb on - strand at 2208.135 kb on + strand at 2208.164 kb on + strand at 2208.224 kb on + strand at 2208.322 kb on - strand at 2208.339 kb on - strand at 2208.385 kb on + strand at 2208.400 kb on + strand, within CA264_09450 at 2208.479 kb on - strand, within CA264_09450 at 2208.589 kb on + strand, within CA264_09450 at 2208.589 kb on + strand, within CA264_09450 at 2208.590 kb on - strand, within CA264_09450 at 2208.592 kb on - strand at 2208.592 kb on - strand at 2208.592 kb on - strand at 2208.654 kb on - strand at 2208.683 kb on - strand at 2208.720 kb on - strand at 2208.803 kb on - strand at 2208.960 kb on + strand, within CA264_09455 at 2208.961 kb on - strand, within CA264_09455 at 2208.961 kb on - strand, within CA264_09455 at 2208.976 kb on - strand, within CA264_09455 at 2208.976 kb on - strand, within CA264_09455 at 2208.995 kb on - strand, within CA264_09455 at 2209.021 kb on + strand, within CA264_09455 at 2209.028 kb on + strand, within CA264_09455 at 2209.036 kb on + strand, within CA264_09455 at 2209.036 kb on + strand, within CA264_09455 at 2209.037 kb on - strand, within CA264_09455 at 2209.054 kb on + strand, within CA264_09455 at 2209.057 kb on + strand, within CA264_09455 at 2209.057 kb on + strand, within CA264_09455 at 2209.057 kb on + strand, within CA264_09455 at 2209.057 kb on + strand, within CA264_09455 at 2209.057 kb on + strand, within CA264_09455 at 2209.058 kb on - strand, within CA264_09455 at 2209.058 kb on - strand, within CA264_09455 at 2209.058 kb on - strand, within CA264_09455 at 2209.080 kb on + strand, within CA264_09455 at 2209.081 kb on - strand at 2209.081 kb on - strand, within CA264_09455 at 2209.192 kb on + strand, within CA264_09455 at 2209.202 kb on + strand, within CA264_09455 at 2209.202 kb on + strand, within CA264_09455 at 2209.328 kb on - strand, within CA264_09455 at 2209.503 kb on - strand, within CA264_09455 at 2209.503 kb on - strand, within CA264_09455 at 2209.504 kb on + strand, within CA264_09455 at 2209.518 kb on - strand, within CA264_09455 at 2209.591 kb on + strand at 2209.592 kb on - strand at 2209.595 kb on + strand at 2209.595 kb on + strand at 2209.596 kb on - strand at 2209.599 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,207,437 + CA264_09445 0.30 -0.3 2,207,550 - CA264_09445 0.41 +0.1 2,207,578 + CA264_09445 0.43 -0.0 2,207,578 + CA264_09445 0.43 +0.8 2,207,603 + CA264_09445 0.45 +1.0 2,207,657 + CA264_09445 0.50 +0.2 2,207,735 + CA264_09445 0.57 +0.6 2,207,736 - CA264_09445 0.57 -0.8 2,207,805 + CA264_09445 0.63 +0.1 2,208,067 - CA264_09445 0.87 -0.1 2,208,078 - CA264_09445 0.88 +0.9 2,208,090 - CA264_09445 0.89 +0.1 2,208,090 - CA264_09445 0.89 +0.3 2,208,090 - CA264_09445 0.89 +0.0 2,208,126 - +0.1 2,208,135 + -0.0 2,208,164 + -1.3 2,208,224 + -0.2 2,208,322 - -0.6 2,208,339 - +0.0 2,208,385 + +0.0 2,208,400 + CA264_09450 0.13 +1.0 2,208,479 - CA264_09450 0.45 -0.5 2,208,589 + CA264_09450 0.89 +0.1 2,208,589 + CA264_09450 0.89 -0.9 2,208,590 - CA264_09450 0.90 -0.8 2,208,592 - +0.4 2,208,592 - -0.3 2,208,592 - -1.6 2,208,654 - +1.0 2,208,683 - -0.2 2,208,720 - -0.0 2,208,803 - -0.1 2,208,960 + CA264_09455 0.27 -0.8 2,208,961 - CA264_09455 0.27 -1.2 2,208,961 - CA264_09455 0.27 +0.4 2,208,976 - CA264_09455 0.28 -0.7 2,208,976 - CA264_09455 0.28 -0.4 2,208,995 - CA264_09455 0.31 -0.5 2,209,021 + CA264_09455 0.33 +0.2 2,209,028 + CA264_09455 0.34 -0.2 2,209,036 + CA264_09455 0.35 -0.2 2,209,036 + CA264_09455 0.35 +0.4 2,209,037 - CA264_09455 0.35 -0.3 2,209,054 + CA264_09455 0.37 -0.7 2,209,057 + CA264_09455 0.37 -0.4 2,209,057 + CA264_09455 0.37 -0.6 2,209,057 + CA264_09455 0.37 -0.6 2,209,057 + CA264_09455 0.37 -0.6 2,209,057 + CA264_09455 0.37 -0.4 2,209,058 - CA264_09455 0.38 -0.1 2,209,058 - CA264_09455 0.38 -0.3 2,209,058 - CA264_09455 0.38 +0.8 2,209,080 + CA264_09455 0.40 -0.1 2,209,081 - -0.2 2,209,081 - CA264_09455 0.40 -0.2 2,209,192 + CA264_09455 0.53 -1.8 2,209,202 + CA264_09455 0.54 -0.1 2,209,202 + CA264_09455 0.54 -0.3 2,209,328 - CA264_09455 0.68 -0.2 2,209,503 - CA264_09455 0.87 -3.0 2,209,503 - CA264_09455 0.87 -0.6 2,209,504 + CA264_09455 0.87 +0.5 2,209,518 - CA264_09455 0.89 -0.3 2,209,591 + -1.2 2,209,592 - -0.3 2,209,595 + -0.3 2,209,595 + +1.2 2,209,596 - -1.2 2,209,599 + +0.1
Or see this region's nucleotide sequence