Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09420 and CA264_09425 are separated by 43 nucleotides CA264_09425 and CA264_09430 are separated by 148 nucleotides
CA264_09420: CA264_09420 - maltose acetyltransferase, at 2,201,655 to 2,202,212
_09420
CA264_09425: CA264_09425 - hypothetical protein, at 2,202,256 to 2,203,800
_09425
CA264_09430: CA264_09430 - 2-isopropylmalate synthase, at 2,203,949 to 2,205,115
_09430
Position (kb)
2202
2203
2204 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2201.258 kb on + strand at 2201.282 kb on + strand at 2201.338 kb on + strand at 2201.341 kb on - strand at 2201.419 kb on + strand at 2201.419 kb on + strand at 2201.420 kb on - strand at 2201.549 kb on + strand at 2201.576 kb on - strand at 2201.616 kb on - strand at 2201.643 kb on + strand at 2201.649 kb on + strand at 2201.693 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.695 kb on - strand at 2201.750 kb on - strand, within CA264_09420 at 2201.800 kb on + strand, within CA264_09420 at 2201.812 kb on + strand, within CA264_09420 at 2201.812 kb on + strand, within CA264_09420 at 2201.813 kb on - strand, within CA264_09420 at 2201.842 kb on + strand, within CA264_09420 at 2201.857 kb on - strand, within CA264_09420 at 2201.857 kb on - strand, within CA264_09420 at 2201.865 kb on + strand, within CA264_09420 at 2201.909 kb on + strand, within CA264_09420 at 2201.982 kb on + strand, within CA264_09420 at 2201.982 kb on + strand, within CA264_09420 at 2202.083 kb on - strand, within CA264_09420 at 2202.100 kb on + strand, within CA264_09420 at 2202.125 kb on - strand, within CA264_09420 at 2202.210 kb on + strand at 2202.257 kb on + strand at 2202.257 kb on + strand at 2202.257 kb on + strand at 2202.257 kb on + strand at 2202.258 kb on - strand at 2202.258 kb on - strand at 2202.258 kb on - strand at 2202.311 kb on - strand at 2202.311 kb on - strand at 2202.311 kb on - strand at 2202.316 kb on - strand at 2202.316 kb on - strand at 2202.381 kb on + strand at 2202.472 kb on + strand, within CA264_09425 at 2202.532 kb on + strand, within CA264_09425 at 2202.545 kb on + strand, within CA264_09425 at 2202.563 kb on + strand, within CA264_09425 at 2202.563 kb on + strand, within CA264_09425 at 2202.651 kb on - strand, within CA264_09425 at 2202.654 kb on + strand, within CA264_09425 at 2202.655 kb on - strand, within CA264_09425 at 2202.686 kb on + strand, within CA264_09425 at 2202.688 kb on + strand, within CA264_09425 at 2202.688 kb on + strand, within CA264_09425 at 2202.688 kb on + strand, within CA264_09425 at 2202.754 kb on + strand, within CA264_09425 at 2202.754 kb on + strand, within CA264_09425 at 2202.754 kb on + strand, within CA264_09425 at 2202.837 kb on - strand, within CA264_09425 at 2202.837 kb on - strand, within CA264_09425 at 2202.842 kb on + strand, within CA264_09425 at 2202.867 kb on + strand, within CA264_09425 at 2202.941 kb on + strand, within CA264_09425 at 2202.942 kb on - strand, within CA264_09425 at 2202.952 kb on - strand, within CA264_09425 at 2202.972 kb on + strand, within CA264_09425 at 2202.990 kb on - strand, within CA264_09425 at 2203.030 kb on - strand, within CA264_09425 at 2203.072 kb on - strand, within CA264_09425 at 2203.089 kb on - strand, within CA264_09425 at 2203.089 kb on - strand, within CA264_09425 at 2203.089 kb on - strand, within CA264_09425 at 2203.092 kb on - strand, within CA264_09425 at 2203.092 kb on - strand, within CA264_09425 at 2203.119 kb on - strand, within CA264_09425 at 2203.154 kb on - strand, within CA264_09425 at 2203.232 kb on + strand, within CA264_09425 at 2203.234 kb on + strand, within CA264_09425 at 2203.235 kb on - strand, within CA264_09425 at 2203.235 kb on - strand, within CA264_09425 at 2203.241 kb on + strand, within CA264_09425 at 2203.350 kb on + strand, within CA264_09425 at 2203.350 kb on + strand, within CA264_09425 at 2203.352 kb on + strand at 2203.353 kb on - strand, within CA264_09425 at 2203.353 kb on - strand, within CA264_09425 at 2203.406 kb on - strand, within CA264_09425 at 2203.433 kb on - strand, within CA264_09425 at 2203.463 kb on + strand, within CA264_09425 at 2203.464 kb on - strand, within CA264_09425 at 2203.494 kb on - strand, within CA264_09425 at 2203.498 kb on + strand, within CA264_09425 at 2203.498 kb on + strand, within CA264_09425 at 2203.499 kb on - strand, within CA264_09425 at 2203.516 kb on + strand, within CA264_09425 at 2203.517 kb on - strand, within CA264_09425 at 2203.517 kb on - strand, within CA264_09425 at 2203.541 kb on + strand, within CA264_09425 at 2203.823 kb on - strand at 2203.844 kb on - strand at 2203.872 kb on - strand at 2204.043 kb on + strand at 2204.043 kb on + strand at 2204.271 kb on + strand, within CA264_09430 at 2204.271 kb on + strand, within CA264_09430 at 2204.272 kb on - strand, within CA264_09430 at 2204.290 kb on + strand, within CA264_09430 at 2204.455 kb on - strand, within CA264_09430 at 2204.489 kb on + strand, within CA264_09430 at 2204.513 kb on + strand, within CA264_09430 at 2204.708 kb on + strand, within CA264_09430
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,201,258 + +1.1 2,201,282 + -0.5 2,201,338 + -1.3 2,201,341 - -0.1 2,201,419 + +1.4 2,201,419 + -0.1 2,201,420 - +0.9 2,201,549 + -0.1 2,201,576 - -0.2 2,201,616 - -0.4 2,201,643 + -0.9 2,201,649 + -3.1 2,201,693 - -1.3 2,201,695 - -0.3 2,201,695 - +1.4 2,201,695 - -0.4 2,201,695 - -0.1 2,201,750 - CA264_09420 0.17 +0.2 2,201,800 + CA264_09420 0.26 +0.2 2,201,812 + CA264_09420 0.28 +1.1 2,201,812 + CA264_09420 0.28 -0.1 2,201,813 - CA264_09420 0.28 +0.7 2,201,842 + CA264_09420 0.34 +1.2 2,201,857 - CA264_09420 0.36 +0.6 2,201,857 - CA264_09420 0.36 -0.2 2,201,865 + CA264_09420 0.38 -1.3 2,201,909 + CA264_09420 0.46 -0.7 2,201,982 + CA264_09420 0.59 +0.0 2,201,982 + CA264_09420 0.59 -0.6 2,202,083 - CA264_09420 0.77 +0.4 2,202,100 + CA264_09420 0.80 +1.5 2,202,125 - CA264_09420 0.84 -0.2 2,202,210 + +0.0 2,202,257 + +0.4 2,202,257 + +0.2 2,202,257 + -1.2 2,202,257 + -0.1 2,202,258 - -0.1 2,202,258 - +0.2 2,202,258 - -0.3 2,202,311 - +0.0 2,202,311 - -0.6 2,202,311 - +1.0 2,202,316 - -0.7 2,202,316 - -1.3 2,202,381 + -0.7 2,202,472 + CA264_09425 0.14 +0.2 2,202,532 + CA264_09425 0.18 +0.8 2,202,545 + CA264_09425 0.19 +0.1 2,202,563 + CA264_09425 0.20 -0.9 2,202,563 + CA264_09425 0.20 -0.4 2,202,651 - CA264_09425 0.26 -0.2 2,202,654 + CA264_09425 0.26 +0.6 2,202,655 - CA264_09425 0.26 +0.9 2,202,686 + CA264_09425 0.28 +0.0 2,202,688 + CA264_09425 0.28 -0.4 2,202,688 + CA264_09425 0.28 -0.3 2,202,688 + CA264_09425 0.28 +0.5 2,202,754 + CA264_09425 0.32 -0.0 2,202,754 + CA264_09425 0.32 +0.8 2,202,754 + CA264_09425 0.32 -0.4 2,202,837 - CA264_09425 0.38 -0.7 2,202,837 - CA264_09425 0.38 -0.4 2,202,842 + CA264_09425 0.38 +0.3 2,202,867 + CA264_09425 0.40 +0.1 2,202,941 + CA264_09425 0.44 -0.2 2,202,942 - CA264_09425 0.44 -0.2 2,202,952 - CA264_09425 0.45 -0.3 2,202,972 + CA264_09425 0.46 -0.4 2,202,990 - CA264_09425 0.48 +0.0 2,203,030 - CA264_09425 0.50 -0.0 2,203,072 - CA264_09425 0.53 -0.4 2,203,089 - CA264_09425 0.54 -0.2 2,203,089 - CA264_09425 0.54 -0.5 2,203,089 - CA264_09425 0.54 -0.1 2,203,092 - CA264_09425 0.54 -0.7 2,203,092 - CA264_09425 0.54 -0.1 2,203,119 - CA264_09425 0.56 -0.1 2,203,154 - CA264_09425 0.58 -0.4 2,203,232 + CA264_09425 0.63 -0.3 2,203,234 + CA264_09425 0.63 +1.5 2,203,235 - CA264_09425 0.63 +0.7 2,203,235 - CA264_09425 0.63 +1.0 2,203,241 + CA264_09425 0.64 -0.2 2,203,350 + CA264_09425 0.71 -0.6 2,203,350 + CA264_09425 0.71 -0.8 2,203,352 + -0.2 2,203,353 - CA264_09425 0.71 -0.2 2,203,353 - CA264_09425 0.71 -0.9 2,203,406 - CA264_09425 0.74 -0.2 2,203,433 - CA264_09425 0.76 +2.2 2,203,463 + CA264_09425 0.78 -0.2 2,203,464 - CA264_09425 0.78 +0.0 2,203,494 - CA264_09425 0.80 -1.2 2,203,498 + CA264_09425 0.80 -0.4 2,203,498 + CA264_09425 0.80 +0.1 2,203,499 - CA264_09425 0.80 -2.5 2,203,516 + CA264_09425 0.82 -1.1 2,203,517 - CA264_09425 0.82 +0.1 2,203,517 - CA264_09425 0.82 -1.0 2,203,541 + CA264_09425 0.83 +0.3 2,203,823 - +0.6 2,203,844 - +0.6 2,203,872 - -0.2 2,204,043 + -0.7 2,204,043 + +0.4 2,204,271 + CA264_09430 0.28 -0.8 2,204,271 + CA264_09430 0.28 -1.2 2,204,272 - CA264_09430 0.28 +0.1 2,204,290 + CA264_09430 0.29 -1.5 2,204,455 - CA264_09430 0.43 -0.7 2,204,489 + CA264_09430 0.46 -0.3 2,204,513 + CA264_09430 0.48 +0.0 2,204,708 + CA264_09430 0.65 +0.1
Or see this region's nucleotide sequence