Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09395 and CA264_09400 are separated by 71 nucleotides CA264_09400 and CA264_09405 are separated by 88 nucleotides CA264_09405 and CA264_09410 are separated by 280 nucleotides CA264_09410 and CA264_09415 are separated by 171 nucleotides
CA264_09395: CA264_09395 - hypothetical protein, at 2,196,749 to 2,197,372
_09395
CA264_09400: CA264_09400 - hypothetical protein, at 2,197,444 to 2,197,671
_09400
CA264_09405: CA264_09405 - hypothetical protein, at 2,197,760 to 2,197,993
_09405
CA264_09410: CA264_09410 - recombinase RecQ, at 2,198,274 to 2,200,187
_09410
CA264_09415: CA264_09415 - hypothetical protein, at 2,200,359 to 2,201,153
_09415
Position (kb)
2198
2199
2200
2201 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2197.337 kb on - strand at 2197.367 kb on + strand at 2197.367 kb on + strand at 2197.372 kb on + strand at 2197.372 kb on + strand at 2197.373 kb on - strand at 2197.373 kb on - strand at 2197.444 kb on - strand at 2197.512 kb on - strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.519 kb on + strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.520 kb on - strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.575 kb on + strand, within CA264_09400 at 2197.576 kb on - strand, within CA264_09400 at 2197.642 kb on + strand, within CA264_09400 at 2197.734 kb on + strand at 2197.734 kb on + strand at 2197.738 kb on + strand at 2197.739 kb on - strand at 2197.745 kb on - strand at 2197.755 kb on + strand at 2197.755 kb on + strand at 2197.777 kb on - strand at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.842 kb on + strand, within CA264_09405 at 2197.897 kb on + strand, within CA264_09405 at 2197.912 kb on + strand, within CA264_09405 at 2197.913 kb on - strand, within CA264_09405 at 2197.914 kb on + strand, within CA264_09405 at 2197.914 kb on + strand, within CA264_09405 at 2197.947 kb on + strand, within CA264_09405 at 2197.948 kb on - strand, within CA264_09405 at 2197.991 kb on + strand at 2197.991 kb on + strand at 2198.018 kb on - strand at 2198.019 kb on + strand at 2198.020 kb on - strand at 2198.095 kb on + strand at 2198.096 kb on - strand at 2198.112 kb on + strand at 2198.272 kb on + strand at 2198.312 kb on + strand at 2198.312 kb on + strand at 2198.313 kb on - strand at 2198.404 kb on + strand at 2198.404 kb on + strand at 2198.404 kb on + strand at 2200.167 kb on + strand at 2200.167 kb on + strand at 2200.167 kb on + strand at 2200.203 kb on - strand at 2200.207 kb on + strand at 2200.294 kb on + strand at 2200.309 kb on - strand at 2200.309 kb on - strand at 2200.339 kb on + strand at 2200.345 kb on + strand at 2200.354 kb on + strand at 2200.458 kb on - strand, within CA264_09415 at 2200.515 kb on - strand, within CA264_09415 at 2200.544 kb on - strand, within CA264_09415 at 2200.682 kb on - strand, within CA264_09415 at 2200.703 kb on + strand, within CA264_09415 at 2200.726 kb on - strand, within CA264_09415 at 2200.757 kb on + strand, within CA264_09415 at 2200.781 kb on + strand, within CA264_09415 at 2200.807 kb on + strand, within CA264_09415 at 2200.807 kb on + strand, within CA264_09415 at 2200.954 kb on - strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2200.999 kb on + strand, within CA264_09415 at 2201.013 kb on + strand, within CA264_09415 at 2201.015 kb on + strand, within CA264_09415 at 2201.091 kb on + strand at 2201.091 kb on + strand at 2201.091 kb on + strand at 2201.092 kb on - strand at 2201.139 kb on - strand at 2201.174 kb on - strand at 2201.174 kb on - strand at 2201.179 kb on - strand at 2201.182 kb on + strand at 2201.183 kb on - strand at 2201.183 kb on - strand at 2201.185 kb on - strand at 2201.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 2,197,337 - -0.3 2,197,367 + +0.9 2,197,367 + +0.3 2,197,372 + -0.0 2,197,372 + +0.4 2,197,373 - +0.1 2,197,373 - -0.4 2,197,444 - +0.0 2,197,512 - CA264_09400 0.30 +0.4 2,197,519 + CA264_09400 0.33 +1.2 2,197,519 + CA264_09400 0.33 -1.2 2,197,520 - CA264_09400 0.33 -0.4 2,197,520 - CA264_09400 0.33 +0.4 2,197,575 + CA264_09400 0.57 -0.2 2,197,575 + CA264_09400 0.57 -0.1 2,197,576 - CA264_09400 0.58 -0.4 2,197,642 + CA264_09400 0.87 -0.2 2,197,734 + +0.7 2,197,734 + -0.4 2,197,738 + +0.1 2,197,739 - -0.0 2,197,745 - -0.4 2,197,755 + +0.4 2,197,755 + -0.0 2,197,777 - +0.1 2,197,842 + CA264_09405 0.35 +0.8 2,197,842 + CA264_09405 0.35 -0.1 2,197,842 + CA264_09405 0.35 +0.6 2,197,842 + CA264_09405 0.35 -0.1 2,197,897 + CA264_09405 0.59 +0.7 2,197,912 + CA264_09405 0.65 -0.3 2,197,913 - CA264_09405 0.65 -0.3 2,197,914 + CA264_09405 0.66 +0.2 2,197,914 + CA264_09405 0.66 -0.6 2,197,947 + CA264_09405 0.80 +0.2 2,197,948 - CA264_09405 0.80 +1.1 2,197,991 + -1.2 2,197,991 + +1.8 2,198,018 - -1.4 2,198,019 + -0.9 2,198,020 - +1.2 2,198,095 + +1.1 2,198,096 - +1.3 2,198,112 + -0.4 2,198,272 + +1.6 2,198,312 + -3.4 2,198,312 + -1.4 2,198,313 - +0.5 2,198,404 + -1.2 2,198,404 + -0.1 2,198,404 + -0.7 2,200,167 + -0.2 2,200,167 + -0.5 2,200,167 + -1.1 2,200,203 - -0.2 2,200,207 + +0.5 2,200,294 + -0.7 2,200,309 - -1.0 2,200,309 - +1.7 2,200,339 + +0.0 2,200,345 + -1.1 2,200,354 + +0.4 2,200,458 - CA264_09415 0.12 +0.1 2,200,515 - CA264_09415 0.20 -0.5 2,200,544 - CA264_09415 0.23 -0.3 2,200,682 - CA264_09415 0.41 +1.5 2,200,703 + CA264_09415 0.43 +0.3 2,200,726 - CA264_09415 0.46 +0.0 2,200,757 + CA264_09415 0.50 +0.2 2,200,781 + CA264_09415 0.53 +0.4 2,200,807 + CA264_09415 0.56 +1.9 2,200,807 + CA264_09415 0.56 +1.3 2,200,954 - CA264_09415 0.75 -0.8 2,200,999 + CA264_09415 0.81 -0.3 2,200,999 + CA264_09415 0.81 +0.3 2,200,999 + CA264_09415 0.81 -0.6 2,201,013 + CA264_09415 0.82 -1.6 2,201,015 + CA264_09415 0.83 -0.7 2,201,091 + -0.4 2,201,091 + -0.4 2,201,091 + -0.5 2,201,092 - +1.4 2,201,139 - -0.3 2,201,174 - +0.2 2,201,174 - +0.2 2,201,179 - -0.3 2,201,182 + -2.0 2,201,183 - -1.5 2,201,183 - +0.5 2,201,185 - -3.1 2,201,185 - -2.9
Or see this region's nucleotide sequence