Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07710 and CA264_07715 are separated by 11 nucleotides CA264_07715 and CA264_07720 are separated by 77 nucleotides
CA264_07710: CA264_07710 - SusC/RagA family TonB-linked outer membrane protein, at 1,785,538 to 1,788,660
_07710
CA264_07715: CA264_07715 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 1,788,672 to 1,790,090
_07715
CA264_07720: CA264_07720 - gamma-glutamyl-phosphate reductase, at 1,790,168 to 1,791,415
_07720
Position (kb)
1788
1789
1790
1791 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1787.719 kb on + strand, within CA264_07710 at 1787.719 kb on + strand, within CA264_07710 at 1787.719 kb on + strand, within CA264_07710 at 1787.720 kb on - strand, within CA264_07710 at 1787.722 kb on - strand, within CA264_07710 at 1787.723 kb on + strand, within CA264_07710 at 1787.723 kb on + strand, within CA264_07710 at 1787.723 kb on + strand, within CA264_07710 at 1787.724 kb on - strand, within CA264_07710 at 1787.724 kb on - strand, within CA264_07710 at 1787.724 kb on - strand, within CA264_07710 at 1787.724 kb on - strand, within CA264_07710 at 1787.726 kb on + strand, within CA264_07710 at 1787.726 kb on + strand, within CA264_07710 at 1787.727 kb on - strand, within CA264_07710 at 1787.766 kb on - strand, within CA264_07710 at 1787.905 kb on + strand, within CA264_07710 at 1787.909 kb on + strand, within CA264_07710 at 1787.909 kb on + strand, within CA264_07710 at 1787.910 kb on - strand, within CA264_07710 at 1787.910 kb on - strand, within CA264_07710 at 1787.910 kb on - strand, within CA264_07710 at 1787.921 kb on + strand, within CA264_07710 at 1787.984 kb on - strand, within CA264_07710 at 1787.986 kb on + strand, within CA264_07710 at 1788.146 kb on - strand, within CA264_07710 at 1788.146 kb on - strand, within CA264_07710 at 1788.156 kb on + strand, within CA264_07710 at 1788.199 kb on + strand, within CA264_07710 at 1788.244 kb on + strand, within CA264_07710 at 1788.245 kb on - strand, within CA264_07710 at 1788.318 kb on - strand, within CA264_07710 at 1788.336 kb on - strand, within CA264_07710 at 1788.371 kb on - strand at 1788.383 kb on - strand at 1788.452 kb on - strand at 1788.542 kb on - strand at 1788.542 kb on - strand at 1788.590 kb on + strand at 1788.590 kb on + strand at 1788.590 kb on + strand at 1788.590 kb on + strand at 1788.591 kb on - strand at 1788.631 kb on + strand at 1788.631 kb on + strand at 1788.645 kb on + strand at 1788.645 kb on + strand at 1788.663 kb on + strand at 1788.663 kb on + strand at 1788.664 kb on - strand at 1788.690 kb on + strand at 1788.690 kb on + strand at 1788.691 kb on - strand at 1788.864 kb on + strand, within CA264_07715 at 1788.865 kb on - strand, within CA264_07715 at 1788.865 kb on - strand, within CA264_07715 at 1789.017 kb on + strand, within CA264_07715 at 1789.018 kb on - strand, within CA264_07715 at 1789.048 kb on - strand, within CA264_07715 at 1789.089 kb on + strand, within CA264_07715 at 1789.240 kb on + strand, within CA264_07715 at 1789.366 kb on - strand, within CA264_07715 at 1789.507 kb on - strand, within CA264_07715 at 1789.507 kb on - strand, within CA264_07715 at 1789.629 kb on + strand, within CA264_07715 at 1789.681 kb on + strand, within CA264_07715 at 1789.682 kb on - strand, within CA264_07715 at 1789.687 kb on - strand, within CA264_07715 at 1789.749 kb on + strand, within CA264_07715 at 1789.750 kb on - strand, within CA264_07715 at 1789.772 kb on - strand, within CA264_07715 at 1789.772 kb on - strand, within CA264_07715 at 1789.772 kb on - strand, within CA264_07715 at 1789.781 kb on + strand, within CA264_07715 at 1789.822 kb on - strand, within CA264_07715 at 1789.826 kb on + strand, within CA264_07715 at 1789.826 kb on + strand, within CA264_07715 at 1789.827 kb on - strand, within CA264_07715 at 1789.827 kb on - strand, within CA264_07715 at 1789.827 kb on - strand, within CA264_07715 at 1789.890 kb on + strand, within CA264_07715 at 1789.891 kb on - strand, within CA264_07715 at 1789.891 kb on - strand, within CA264_07715 at 1789.891 kb on - strand, within CA264_07715 at 1789.891 kb on - strand, within CA264_07715 at 1789.895 kb on + strand, within CA264_07715 at 1789.896 kb on - strand, within CA264_07715 at 1789.944 kb on + strand, within CA264_07715 at 1789.950 kb on + strand at 1790.096 kb on + strand at 1790.096 kb on + strand at 1790.097 kb on - strand at 1790.097 kb on - strand at 1790.104 kb on - strand at 1790.150 kb on + strand at 1790.156 kb on + strand at 1790.156 kb on + strand at 1790.156 kb on + strand at 1790.208 kb on + strand at 1790.208 kb on + strand at 1790.305 kb on + strand, within CA264_07720 at 1790.426 kb on - strand, within CA264_07720 at 1790.535 kb on + strand, within CA264_07720 at 1790.535 kb on + strand at 1790.536 kb on - strand, within CA264_07720 at 1790.539 kb on + strand, within CA264_07720 at 1790.557 kb on - strand, within CA264_07720 at 1790.557 kb on - strand, within CA264_07720 at 1790.743 kb on - strand, within CA264_07720 at 1790.743 kb on - strand, within CA264_07720 at 1790.743 kb on - strand, within CA264_07720 at 1790.746 kb on + strand, within CA264_07720 at 1790.746 kb on + strand, within CA264_07720 at 1790.747 kb on - strand, within CA264_07720 at 1790.747 kb on - strand, within CA264_07720 at 1790.747 kb on - strand, within CA264_07720 at 1790.803 kb on - strand, within CA264_07720 at 1790.803 kb on - strand, within CA264_07720 at 1790.803 kb on - strand, within CA264_07720 at 1790.836 kb on + strand, within CA264_07720 at 1790.836 kb on + strand, within CA264_07720 at 1790.837 kb on - strand, within CA264_07720 at 1790.839 kb on + strand, within CA264_07720 at 1790.843 kb on + strand, within CA264_07720 at 1790.843 kb on + strand, within CA264_07720 at 1790.843 kb on + strand, within CA264_07720 at 1790.847 kb on + strand, within CA264_07720 at 1790.848 kb on - strand, within CA264_07720 at 1790.914 kb on + strand, within CA264_07720 at 1791.032 kb on - strand, within CA264_07720 at 1791.046 kb on + strand, within CA264_07720 at 1791.067 kb on - strand, within CA264_07720
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,787,719 + CA264_07710 0.70 -0.2 1,787,719 + CA264_07710 0.70 +0.1 1,787,719 + CA264_07710 0.70 -0.4 1,787,720 - CA264_07710 0.70 -0.2 1,787,722 - CA264_07710 0.70 +0.2 1,787,723 + CA264_07710 0.70 +0.5 1,787,723 + CA264_07710 0.70 -1.3 1,787,723 + CA264_07710 0.70 +0.0 1,787,724 - CA264_07710 0.70 -0.7 1,787,724 - CA264_07710 0.70 -0.6 1,787,724 - CA264_07710 0.70 +0.1 1,787,724 - CA264_07710 0.70 +1.0 1,787,726 + CA264_07710 0.70 +0.1 1,787,726 + CA264_07710 0.70 -0.5 1,787,727 - CA264_07710 0.70 -0.7 1,787,766 - CA264_07710 0.71 +0.2 1,787,905 + CA264_07710 0.76 +0.4 1,787,909 + CA264_07710 0.76 -1.3 1,787,909 + CA264_07710 0.76 -0.9 1,787,910 - CA264_07710 0.76 +0.5 1,787,910 - CA264_07710 0.76 +0.5 1,787,910 - CA264_07710 0.76 -0.3 1,787,921 + CA264_07710 0.76 +0.2 1,787,984 - CA264_07710 0.78 -0.4 1,787,986 + CA264_07710 0.78 -0.5 1,788,146 - CA264_07710 0.84 +2.0 1,788,146 - CA264_07710 0.84 +1.2 1,788,156 + CA264_07710 0.84 -0.3 1,788,199 + CA264_07710 0.85 -0.4 1,788,244 + CA264_07710 0.87 -0.0 1,788,245 - CA264_07710 0.87 +0.0 1,788,318 - CA264_07710 0.89 -0.4 1,788,336 - CA264_07710 0.90 +0.3 1,788,371 - -0.9 1,788,383 - +0.1 1,788,452 - -1.6 1,788,542 - +0.2 1,788,542 - -0.3 1,788,590 + -0.1 1,788,590 + -0.3 1,788,590 + -1.0 1,788,590 + +0.2 1,788,591 - -0.1 1,788,631 + -0.4 1,788,631 + -0.0 1,788,645 + -0.3 1,788,645 + -1.2 1,788,663 + +0.3 1,788,663 + -1.2 1,788,664 - -0.5 1,788,690 + -0.2 1,788,690 + +2.3 1,788,691 - -0.3 1,788,864 + CA264_07715 0.14 -0.0 1,788,865 - CA264_07715 0.14 +0.3 1,788,865 - CA264_07715 0.14 -0.2 1,789,017 + CA264_07715 0.24 -1.3 1,789,018 - CA264_07715 0.24 +0.1 1,789,048 - CA264_07715 0.26 -1.1 1,789,089 + CA264_07715 0.29 -0.1 1,789,240 + CA264_07715 0.40 -0.4 1,789,366 - CA264_07715 0.49 -1.8 1,789,507 - CA264_07715 0.59 -0.2 1,789,507 - CA264_07715 0.59 -1.3 1,789,629 + CA264_07715 0.67 +0.6 1,789,681 + CA264_07715 0.71 -0.3 1,789,682 - CA264_07715 0.71 -0.3 1,789,687 - CA264_07715 0.72 -0.2 1,789,749 + CA264_07715 0.76 -0.8 1,789,750 - CA264_07715 0.76 +0.4 1,789,772 - CA264_07715 0.78 -0.1 1,789,772 - CA264_07715 0.78 +1.3 1,789,772 - CA264_07715 0.78 +0.1 1,789,781 + CA264_07715 0.78 -0.5 1,789,822 - CA264_07715 0.81 -0.7 1,789,826 + CA264_07715 0.81 +1.7 1,789,826 + CA264_07715 0.81 -0.0 1,789,827 - CA264_07715 0.81 +1.2 1,789,827 - CA264_07715 0.81 -1.7 1,789,827 - CA264_07715 0.81 +0.8 1,789,890 + CA264_07715 0.86 -0.3 1,789,891 - CA264_07715 0.86 +0.1 1,789,891 - CA264_07715 0.86 -0.5 1,789,891 - CA264_07715 0.86 +0.3 1,789,891 - CA264_07715 0.86 -1.2 1,789,895 + CA264_07715 0.86 -1.1 1,789,896 - CA264_07715 0.86 +0.2 1,789,944 + CA264_07715 0.90 -0.4 1,789,950 + +1.0 1,790,096 + +0.4 1,790,096 + +0.0 1,790,097 - -0.6 1,790,097 - +0.3 1,790,104 - -0.1 1,790,150 + -0.6 1,790,156 + -1.0 1,790,156 + -1.5 1,790,156 + -0.0 1,790,208 + +0.0 1,790,208 + -0.1 1,790,305 + CA264_07720 0.11 -0.9 1,790,426 - CA264_07720 0.21 -0.3 1,790,535 + CA264_07720 0.29 -1.0 1,790,535 + +3.4 1,790,536 - CA264_07720 0.29 -1.5 1,790,539 + CA264_07720 0.30 -1.3 1,790,557 - CA264_07720 0.31 -1.0 1,790,557 - CA264_07720 0.31 -0.7 1,790,743 - CA264_07720 0.46 -1.1 1,790,743 - CA264_07720 0.46 +0.1 1,790,743 - CA264_07720 0.46 -1.1 1,790,746 + CA264_07720 0.46 -0.7 1,790,746 + CA264_07720 0.46 -0.9 1,790,747 - CA264_07720 0.46 -1.1 1,790,747 - CA264_07720 0.46 -0.3 1,790,747 - CA264_07720 0.46 +0.4 1,790,803 - CA264_07720 0.51 -1.9 1,790,803 - CA264_07720 0.51 -1.8 1,790,803 - CA264_07720 0.51 -0.3 1,790,836 + CA264_07720 0.54 -3.1 1,790,836 + CA264_07720 0.54 -1.4 1,790,837 - CA264_07720 0.54 -1.3 1,790,839 + CA264_07720 0.54 -0.9 1,790,843 + CA264_07720 0.54 -1.4 1,790,843 + CA264_07720 0.54 -1.7 1,790,843 + CA264_07720 0.54 +0.2 1,790,847 + CA264_07720 0.54 -0.9 1,790,848 - CA264_07720 0.54 -0.8 1,790,914 + CA264_07720 0.60 -2.0 1,791,032 - CA264_07720 0.69 -1.3 1,791,046 + CA264_07720 0.70 -1.1 1,791,067 - CA264_07720 0.72 -1.2
Or see this region's nucleotide sequence