Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07150 and CA264_07155 are separated by 711 nucleotides CA264_07155 and CA264_07160 are separated by 362 nucleotides
CA264_07150: CA264_07150 - elongation factor 4, at 1,648,292 to 1,650,076
_07150
CA264_07155: CA264_07155 - methylmalonyl-CoA mutase, at 1,650,788 to 1,654,174
_07155
CA264_07160: CA264_07160 - FMN-binding glutamate synthase family protein, at 1,654,537 to 1,656,093
_07160
Position (kb)
1650
1651
1652
1653
1654
1655 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1649.807 kb on - strand, within CA264_07150 at 1649.915 kb on - strand at 1650.029 kb on - strand at 1650.076 kb on + strand at 1650.080 kb on + strand at 1650.080 kb on + strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.081 kb on - strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.171 kb on + strand at 1650.172 kb on - strand at 1650.174 kb on - strand at 1650.249 kb on + strand at 1650.249 kb on + strand at 1650.250 kb on - strand at 1650.253 kb on + strand at 1650.275 kb on + strand at 1650.275 kb on + strand at 1650.364 kb on - strand at 1650.381 kb on - strand at 1650.458 kb on + strand at 1650.459 kb on - strand at 1650.467 kb on - strand at 1650.551 kb on + strand at 1650.642 kb on - strand at 1650.649 kb on - strand at 1650.649 kb on - strand at 1650.658 kb on - strand at 1650.682 kb on + strand at 1650.688 kb on + strand at 1650.688 kb on + strand at 1650.728 kb on + strand at 1650.729 kb on - strand at 1650.729 kb on - strand at 1650.729 kb on - strand at 1650.750 kb on + strand at 1650.751 kb on - strand at 1650.751 kb on - strand at 1650.751 kb on - strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.783 kb on + strand at 1650.784 kb on - strand at 1650.785 kb on + strand at 1650.785 kb on + strand at 1650.785 kb on + strand at 1650.786 kb on - strand at 1650.800 kb on - strand at 1650.805 kb on - strand at 1650.805 kb on - strand at 1650.805 kb on - strand at 1650.812 kb on + strand at 1650.812 kb on + strand at 1650.812 kb on + strand at 1650.813 kb on - strand at 1650.823 kb on - strand at 1650.829 kb on + strand at 1650.829 kb on + strand at 1650.835 kb on + strand at 1650.841 kb on + strand at 1650.895 kb on + strand at 1650.900 kb on + strand at 1650.921 kb on + strand at 1650.922 kb on - strand at 1651.037 kb on + strand at 1651.038 kb on - strand at 1651.043 kb on + strand at 1651.044 kb on - strand at 1651.044 kb on - strand at 1651.107 kb on + strand at 1651.107 kb on + strand at 1651.108 kb on - strand at 1651.108 kb on - strand at 1651.154 kb on - strand, within CA264_07155 at 1651.387 kb on - strand, within CA264_07155 at 1651.389 kb on + strand, within CA264_07155 at 1651.390 kb on - strand, within CA264_07155 at 1651.393 kb on + strand, within CA264_07155 at 1651.396 kb on - strand, within CA264_07155 at 1651.483 kb on + strand, within CA264_07155 at 1651.510 kb on + strand, within CA264_07155 at 1651.555 kb on + strand, within CA264_07155 at 1651.555 kb on + strand, within CA264_07155 at 1651.556 kb on - strand, within CA264_07155 at 1651.574 kb on + strand, within CA264_07155 at 1651.574 kb on + strand, within CA264_07155 at 1651.574 kb on + strand, within CA264_07155 at 1651.574 kb on + strand, within CA264_07155 at 1651.575 kb on - strand, within CA264_07155 at 1651.623 kb on - strand, within CA264_07155 at 1651.623 kb on - strand, within CA264_07155 at 1651.648 kb on - strand, within CA264_07155 at 1651.740 kb on - strand, within CA264_07155 at 1651.874 kb on + strand, within CA264_07155 at 1651.915 kb on + strand, within CA264_07155 at 1652.031 kb on + strand, within CA264_07155 at 1652.186 kb on - strand, within CA264_07155 at 1652.197 kb on - strand, within CA264_07155 at 1652.211 kb on + strand, within CA264_07155 at 1652.295 kb on + strand, within CA264_07155 at 1652.319 kb on + strand, within CA264_07155 at 1652.320 kb on - strand, within CA264_07155 at 1652.320 kb on - strand, within CA264_07155 at 1652.342 kb on + strand, within CA264_07155 at 1652.343 kb on - strand, within CA264_07155 at 1652.377 kb on - strand, within CA264_07155 at 1652.422 kb on - strand, within CA264_07155 at 1652.548 kb on + strand, within CA264_07155 at 1652.632 kb on + strand, within CA264_07155 at 1652.632 kb on + strand, within CA264_07155 at 1652.633 kb on - strand, within CA264_07155 at 1652.675 kb on + strand, within CA264_07155 at 1652.676 kb on - strand, within CA264_07155 at 1652.690 kb on + strand, within CA264_07155 at 1652.691 kb on - strand, within CA264_07155 at 1652.695 kb on + strand, within CA264_07155 at 1652.751 kb on - strand, within CA264_07155 at 1652.815 kb on + strand, within CA264_07155 at 1652.817 kb on + strand, within CA264_07155 at 1652.817 kb on + strand, within CA264_07155 at 1652.921 kb on + strand, within CA264_07155 at 1652.922 kb on - strand, within CA264_07155 at 1653.036 kb on + strand, within CA264_07155 at 1653.037 kb on - strand, within CA264_07155 at 1653.039 kb on - strand, within CA264_07155 at 1653.127 kb on + strand, within CA264_07155 at 1653.177 kb on - strand, within CA264_07155 at 1653.200 kb on - strand, within CA264_07155 at 1653.274 kb on + strand, within CA264_07155 at 1653.300 kb on + strand, within CA264_07155 at 1653.300 kb on + strand, within CA264_07155 at 1653.300 kb on + strand, within CA264_07155 at 1653.308 kb on + strand, within CA264_07155 at 1653.308 kb on + strand, within CA264_07155 at 1653.309 kb on - strand, within CA264_07155 at 1653.309 kb on - strand, within CA264_07155 at 1653.443 kb on + strand, within CA264_07155 at 1653.444 kb on - strand, within CA264_07155 at 1653.477 kb on - strand, within CA264_07155 at 1653.526 kb on + strand, within CA264_07155 at 1653.566 kb on + strand, within CA264_07155 at 1653.567 kb on - strand, within CA264_07155 at 1653.819 kb on - strand, within CA264_07155 at 1653.933 kb on + strand at 1653.949 kb on - strand at 1654.173 kb on - strand at 1654.195 kb on + strand at 1654.195 kb on + strand at 1654.196 kb on - strand at 1654.246 kb on + strand at 1654.263 kb on - strand at 1654.265 kb on - strand at 1654.286 kb on + strand at 1654.286 kb on + strand at 1654.290 kb on + strand at 1654.291 kb on - strand at 1654.297 kb on + strand at 1654.304 kb on + strand at 1654.310 kb on - strand at 1654.311 kb on + strand at 1654.311 kb on + strand at 1654.312 kb on - strand at 1654.319 kb on - strand at 1654.357 kb on - strand at 1654.384 kb on - strand at 1654.439 kb on + strand at 1654.440 kb on - strand at 1654.531 kb on - strand at 1654.539 kb on - strand at 1654.542 kb on + strand at 1654.548 kb on + strand at 1654.550 kb on + strand at 1654.550 kb on + strand at 1654.551 kb on - strand at 1654.551 kb on - strand at 1654.551 kb on - strand at 1654.551 kb on - strand at 1654.562 kb on - strand at 1654.593 kb on - strand at 1654.837 kb on - strand, within CA264_07160 at 1654.872 kb on - strand, within CA264_07160 at 1654.921 kb on + strand, within CA264_07160 at 1654.936 kb on + strand, within CA264_07160 at 1654.967 kb on + strand, within CA264_07160 at 1654.968 kb on - strand, within CA264_07160 at 1655.007 kb on - strand, within CA264_07160
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,649,807 - CA264_07150 0.85 -0.5 1,649,915 - -1.6 1,650,029 - -0.3 1,650,076 + +1.0 1,650,080 + -1.3 1,650,080 + -0.6 1,650,081 - -0.5 1,650,081 - +0.5 1,650,081 - +0.2 1,650,081 - -0.0 1,650,081 - +0.6 1,650,081 - -0.8 1,650,081 - -0.9 1,650,171 + -0.4 1,650,171 + +0.3 1,650,171 + -1.0 1,650,171 + -0.9 1,650,172 - -0.7 1,650,174 - +0.0 1,650,249 + -0.8 1,650,249 + -0.5 1,650,250 - -0.1 1,650,253 + +0.6 1,650,275 + -0.8 1,650,275 + +1.8 1,650,364 - +1.6 1,650,381 - +0.7 1,650,458 + +0.1 1,650,459 - +0.3 1,650,467 - -0.1 1,650,551 + +0.0 1,650,642 - +0.4 1,650,649 - +0.3 1,650,649 - -0.3 1,650,658 - +0.7 1,650,682 + +0.5 1,650,688 + +0.6 1,650,688 + -1.7 1,650,728 + -0.1 1,650,729 - +0.9 1,650,729 - +0.4 1,650,729 - -1.1 1,650,750 + +3.0 1,650,751 - -0.5 1,650,751 - -0.2 1,650,751 - -0.3 1,650,783 + -0.1 1,650,783 + +0.2 1,650,783 + -0.8 1,650,783 + +0.5 1,650,783 + -0.2 1,650,784 - +0.9 1,650,785 + -0.4 1,650,785 + -0.6 1,650,785 + -0.6 1,650,786 - +0.2 1,650,800 - -0.8 1,650,805 - +0.3 1,650,805 - +0.2 1,650,805 - -0.4 1,650,812 + +0.1 1,650,812 + +0.3 1,650,812 + -0.2 1,650,813 - -0.3 1,650,823 - +0.5 1,650,829 + +0.5 1,650,829 + +0.2 1,650,835 + +1.5 1,650,841 + -0.1 1,650,895 + -1.5 1,650,900 + -1.5 1,650,921 + -0.1 1,650,922 - +2.0 1,651,037 + -0.4 1,651,038 - -0.3 1,651,043 + -0.5 1,651,044 - -1.0 1,651,044 - -0.5 1,651,107 + +0.5 1,651,107 + +0.2 1,651,108 - +1.2 1,651,108 - -0.3 1,651,154 - CA264_07155 0.11 -0.5 1,651,387 - CA264_07155 0.18 +0.6 1,651,389 + CA264_07155 0.18 +0.8 1,651,390 - CA264_07155 0.18 -0.2 1,651,393 + CA264_07155 0.18 -0.1 1,651,396 - CA264_07155 0.18 -0.5 1,651,483 + CA264_07155 0.21 -0.8 1,651,510 + CA264_07155 0.21 -0.4 1,651,555 + CA264_07155 0.23 +1.3 1,651,555 + CA264_07155 0.23 -0.2 1,651,556 - CA264_07155 0.23 -0.3 1,651,574 + CA264_07155 0.23 +0.0 1,651,574 + CA264_07155 0.23 -0.3 1,651,574 + CA264_07155 0.23 +0.7 1,651,574 + CA264_07155 0.23 +1.7 1,651,575 - CA264_07155 0.23 -0.4 1,651,623 - CA264_07155 0.25 -2.3 1,651,623 - CA264_07155 0.25 -0.5 1,651,648 - CA264_07155 0.25 +0.0 1,651,740 - CA264_07155 0.28 +0.8 1,651,874 + CA264_07155 0.32 -0.8 1,651,915 + CA264_07155 0.33 -0.5 1,652,031 + CA264_07155 0.37 +0.0 1,652,186 - CA264_07155 0.41 -1.2 1,652,197 - CA264_07155 0.42 -0.6 1,652,211 + CA264_07155 0.42 -0.1 1,652,295 + CA264_07155 0.44 -1.5 1,652,319 + CA264_07155 0.45 -0.1 1,652,320 - CA264_07155 0.45 -0.1 1,652,320 - CA264_07155 0.45 -1.7 1,652,342 + CA264_07155 0.46 -0.7 1,652,343 - CA264_07155 0.46 +0.3 1,652,377 - CA264_07155 0.47 -2.1 1,652,422 - CA264_07155 0.48 -0.4 1,652,548 + CA264_07155 0.52 -1.3 1,652,632 + CA264_07155 0.54 +0.2 1,652,632 + CA264_07155 0.54 +0.0 1,652,633 - CA264_07155 0.54 +1.5 1,652,675 + CA264_07155 0.56 +1.2 1,652,676 - CA264_07155 0.56 -0.3 1,652,690 + CA264_07155 0.56 -0.7 1,652,691 - CA264_07155 0.56 -0.9 1,652,695 + CA264_07155 0.56 -0.1 1,652,751 - CA264_07155 0.58 -1.2 1,652,815 + CA264_07155 0.60 -0.8 1,652,817 + CA264_07155 0.60 -0.4 1,652,817 + CA264_07155 0.60 -0.1 1,652,921 + CA264_07155 0.63 +0.1 1,652,922 - CA264_07155 0.63 -0.5 1,653,036 + CA264_07155 0.66 -0.7 1,653,037 - CA264_07155 0.66 +0.1 1,653,039 - CA264_07155 0.66 +0.5 1,653,127 + CA264_07155 0.69 +0.6 1,653,177 - CA264_07155 0.71 +0.1 1,653,200 - CA264_07155 0.71 +1.0 1,653,274 + CA264_07155 0.73 -0.2 1,653,300 + CA264_07155 0.74 -0.5 1,653,300 + CA264_07155 0.74 +0.9 1,653,300 + CA264_07155 0.74 +0.6 1,653,308 + CA264_07155 0.74 -0.3 1,653,308 + CA264_07155 0.74 -0.4 1,653,309 - CA264_07155 0.74 -0.2 1,653,309 - CA264_07155 0.74 -0.1 1,653,443 + CA264_07155 0.78 +0.8 1,653,444 - CA264_07155 0.78 -0.0 1,653,477 - CA264_07155 0.79 -1.0 1,653,526 + CA264_07155 0.81 +0.2 1,653,566 + CA264_07155 0.82 +0.3 1,653,567 - CA264_07155 0.82 +0.2 1,653,819 - CA264_07155 0.89 +0.5 1,653,933 + -0.2 1,653,949 - -0.3 1,654,173 - -1.1 1,654,195 + -0.4 1,654,195 + +0.3 1,654,196 - -0.1 1,654,246 + -0.8 1,654,263 - -0.7 1,654,265 - +0.0 1,654,286 + -0.2 1,654,286 + +0.0 1,654,290 + -0.1 1,654,291 - +0.2 1,654,297 + +0.8 1,654,304 + +0.4 1,654,310 - -0.4 1,654,311 + -0.1 1,654,311 + -0.1 1,654,312 - -1.3 1,654,319 - -0.7 1,654,357 - +0.2 1,654,384 - -0.1 1,654,439 + -0.3 1,654,440 - +0.7 1,654,531 - -0.1 1,654,539 - -0.3 1,654,542 + -1.6 1,654,548 + -0.1 1,654,550 + -0.4 1,654,550 + -0.8 1,654,551 - +0.2 1,654,551 - -0.3 1,654,551 - -0.6 1,654,551 - +0.1 1,654,562 - -0.1 1,654,593 - +0.3 1,654,837 - CA264_07160 0.19 +0.4 1,654,872 - CA264_07160 0.22 +1.4 1,654,921 + CA264_07160 0.25 +0.3 1,654,936 + CA264_07160 0.26 -0.4 1,654,967 + CA264_07160 0.28 -0.5 1,654,968 - CA264_07160 0.28 -1.5 1,655,007 - CA264_07160 0.30 +0.1
Or see this region's nucleotide sequence