Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07145

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07140 and CA264_07145 are separated by 104 nucleotidesCA264_07145 and CA264_07150 are separated by 167 nucleotides CA264_07140: CA264_07140 - hydroxyacid dehydrogenase, at 1,646,095 to 1,647,138 _07140 CA264_07145: CA264_07145 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase, at 1,647,243 to 1,648,124 _07145 CA264_07150: CA264_07150 - elongation factor 4, at 1,648,292 to 1,650,076 _07150 Position (kb) 1647 1648 1649Strain fitness (log2 ratio) -2 -1 0 1at 1646.262 kb on + strand, within CA264_07140at 1646.262 kb on + strand, within CA264_07140at 1646.263 kb on - strand, within CA264_07140at 1646.263 kb on - strand, within CA264_07140at 1646.269 kb on + strand, within CA264_07140at 1646.269 kb on + strand, within CA264_07140at 1646.299 kb on - strand, within CA264_07140at 1646.376 kb on - strand, within CA264_07140at 1646.376 kb on - strand, within CA264_07140at 1646.406 kb on + strand, within CA264_07140at 1646.407 kb on - strand, within CA264_07140at 1646.476 kb on - strand, within CA264_07140at 1646.476 kb on - strand, within CA264_07140at 1646.645 kb on + strand, within CA264_07140at 1646.645 kb on + strand, within CA264_07140at 1646.646 kb on - strand, within CA264_07140at 1646.646 kb on - strand, within CA264_07140at 1646.705 kb on - strand, within CA264_07140at 1646.734 kb on + strand, within CA264_07140at 1646.735 kb on - strand, within CA264_07140at 1646.784 kb on - strand, within CA264_07140at 1646.792 kb on + strand, within CA264_07140at 1646.879 kb on - strand, within CA264_07140at 1646.879 kb on - strand, within CA264_07140at 1646.916 kb on + strand, within CA264_07140at 1646.973 kb on + strand, within CA264_07140at 1646.973 kb on + strand, within CA264_07140at 1647.030 kb on - strand, within CA264_07140at 1647.032 kb on - strand, within CA264_07140at 1647.032 kb on - strand, within CA264_07140at 1647.139 kb on - strandat 1647.153 kb on + strandat 1647.154 kb on - strandat 1647.244 kb on + strandat 1647.253 kb on - strandat 1647.253 kb on - strandat 1648.130 kb on + strandat 1648.131 kb on - strandat 1648.156 kb on - strandat 1648.156 kb on - strandat 1648.196 kb on + strandat 1648.205 kb on + strandat 1648.210 kb on + strandat 1648.210 kb on + strandat 1648.211 kb on - strandat 1648.211 kb on - strandat 1648.212 kb on + strandat 1648.212 kb on + strandat 1648.214 kb on + strandat 1648.226 kb on + strandat 1648.227 kb on - strandat 1648.227 kb on - strandat 1648.232 kb on + strandat 1648.233 kb on - strandat 1648.303 kb on + strandat 1648.347 kb on - strandat 1648.816 kb on + strand, within CA264_07150at 1648.853 kb on - strand, within CA264_07150at 1648.957 kb on + strand, within CA264_07150at 1648.959 kb on + strand, within CA264_07150at 1648.959 kb on + strand, within CA264_07150at 1648.974 kb on - strand, within CA264_07150

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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1,646,262 + CA264_07140 0.16 +0.8
1,646,262 + CA264_07140 0.16 -0.2
1,646,263 - CA264_07140 0.16 -0.8
1,646,263 - CA264_07140 0.16 -2.1
1,646,269 + CA264_07140 0.17 +0.1
1,646,269 + CA264_07140 0.17 -0.4
1,646,299 - CA264_07140 0.20 -0.5
1,646,376 - CA264_07140 0.27 -0.4
1,646,376 - CA264_07140 0.27 +0.6
1,646,406 + CA264_07140 0.30 +0.0
1,646,407 - CA264_07140 0.30 -0.8
1,646,476 - CA264_07140 0.36 -1.4
1,646,476 - CA264_07140 0.36 +0.4
1,646,645 + CA264_07140 0.53 -1.5
1,646,645 + CA264_07140 0.53 +0.0
1,646,646 - CA264_07140 0.53 +0.6
1,646,646 - CA264_07140 0.53 +1.7
1,646,705 - CA264_07140 0.58 -0.8
1,646,734 + CA264_07140 0.61 +0.2
1,646,735 - CA264_07140 0.61 +0.6
1,646,784 - CA264_07140 0.66 +0.3
1,646,792 + CA264_07140 0.67 -0.2
1,646,879 - CA264_07140 0.75 +0.3
1,646,879 - CA264_07140 0.75 +0.0
1,646,916 + CA264_07140 0.79 -1.0
1,646,973 + CA264_07140 0.84 +0.2
1,646,973 + CA264_07140 0.84 -0.1
1,647,030 - CA264_07140 0.90 -0.1
1,647,032 - CA264_07140 0.90 -0.6
1,647,032 - CA264_07140 0.90 -0.0
1,647,139 - -1.2
1,647,153 + +0.0
1,647,154 - +0.4
1,647,244 + -0.2
1,647,253 - -0.1
1,647,253 - -1.4
1,648,130 + -0.0
1,648,131 - +0.4
1,648,156 - -0.4
1,648,156 - -1.3
1,648,196 + +0.3
1,648,205 + +0.4
1,648,210 + -0.8
1,648,210 + +0.3
1,648,211 - -0.4
1,648,211 - -1.2
1,648,212 + -0.0
1,648,212 + -2.5
1,648,214 + -0.5
1,648,226 + -0.4
1,648,227 - -2.3
1,648,227 - -0.3
1,648,232 + +1.5
1,648,233 - -1.0
1,648,303 + +0.0
1,648,347 - -0.6
1,648,816 + CA264_07150 0.29 -0.8
1,648,853 - CA264_07150 0.31 +0.6
1,648,957 + CA264_07150 0.37 -0.4
1,648,959 + CA264_07150 0.37 -1.6
1,648,959 + CA264_07150 0.37 -0.5
1,648,974 - CA264_07150 0.38 -0.5

Or see this region's nucleotide sequence