Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06940 and CA264_06945 are separated by 481 nucleotides CA264_06945 and CA264_06950 are separated by 51 nucleotides CA264_06950 and CA264_06955 are separated by 117 nucleotides
CA264_06940: CA264_06940 - branched-chain amino acid aminotransferase, at 1,604,859 to 1,605,743
_06940
CA264_06945: CA264_06945 - short-chain dehydrogenase, at 1,606,225 to 1,607,013
_06945
CA264_06950: CA264_06950 - glutathione peroxidase, at 1,607,065 to 1,607,655
_06950
CA264_06955: CA264_06955 - LLM class flavin-dependent oxidoreductase, at 1,607,773 to 1,608,780
_06955
Position (kb)
1606
1607
1608 Strain fitness (log2 ratio)
-2
-1
0
1 at 1605.263 kb on + strand, within CA264_06940 at 1605.263 kb on + strand, within CA264_06940 at 1605.269 kb on - strand, within CA264_06940 at 1605.269 kb on - strand, within CA264_06940 at 1605.322 kb on + strand, within CA264_06940 at 1605.330 kb on + strand, within CA264_06940 at 1605.331 kb on - strand, within CA264_06940 at 1605.439 kb on + strand at 1605.457 kb on + strand, within CA264_06940 at 1605.571 kb on + strand, within CA264_06940 at 1605.591 kb on + strand, within CA264_06940 at 1605.591 kb on + strand, within CA264_06940 at 1605.592 kb on - strand, within CA264_06940 at 1605.592 kb on - strand, within CA264_06940 at 1605.592 kb on - strand, within CA264_06940 at 1605.592 kb on - strand, within CA264_06940 at 1605.649 kb on + strand, within CA264_06940 at 1605.667 kb on + strand at 1605.734 kb on + strand at 1605.739 kb on + strand at 1605.746 kb on + strand at 1605.746 kb on + strand at 1605.747 kb on - strand at 1605.764 kb on - strand at 1605.764 kb on - strand at 1605.767 kb on + strand at 1605.767 kb on + strand at 1605.768 kb on - strand at 1605.769 kb on + strand at 1605.769 kb on + strand at 1605.769 kb on + strand at 1605.770 kb on - strand at 1605.770 kb on - strand at 1605.770 kb on - strand at 1605.770 kb on - strand at 1605.770 kb on - strand at 1605.773 kb on + strand at 1605.828 kb on + strand at 1605.828 kb on + strand at 1605.829 kb on - strand at 1605.864 kb on - strand at 1605.895 kb on + strand at 1605.896 kb on - strand at 1605.906 kb on + strand at 1605.907 kb on - strand at 1606.058 kb on + strand at 1606.058 kb on + strand at 1606.059 kb on - strand at 1606.059 kb on - strand at 1606.059 kb on - strand at 1606.061 kb on + strand at 1606.062 kb on - strand at 1606.062 kb on - strand at 1606.121 kb on + strand at 1606.121 kb on + strand at 1606.122 kb on - strand at 1606.122 kb on - strand at 1606.127 kb on + strand at 1606.211 kb on - strand at 1606.233 kb on - strand at 1606.314 kb on - strand, within CA264_06945 at 1606.322 kb on + strand, within CA264_06945 at 1606.540 kb on - strand, within CA264_06945 at 1606.540 kb on - strand, within CA264_06945 at 1606.605 kb on - strand, within CA264_06945 at 1606.654 kb on + strand, within CA264_06945 at 1606.654 kb on + strand, within CA264_06945 at 1606.681 kb on + strand, within CA264_06945 at 1606.791 kb on + strand, within CA264_06945 at 1606.886 kb on + strand, within CA264_06945 at 1606.886 kb on + strand, within CA264_06945 at 1606.886 kb on + strand, within CA264_06945 at 1606.947 kb on - strand at 1607.086 kb on + strand at 1607.086 kb on + strand at 1607.156 kb on + strand, within CA264_06950 at 1607.156 kb on + strand, within CA264_06950 at 1607.225 kb on + strand, within CA264_06950 at 1607.296 kb on - strand, within CA264_06950 at 1607.432 kb on + strand, within CA264_06950 at 1607.465 kb on - strand, within CA264_06950 at 1607.465 kb on - strand, within CA264_06950 at 1607.532 kb on - strand, within CA264_06950 at 1607.658 kb on + strand at 1607.662 kb on + strand at 1607.663 kb on - strand at 1607.663 kb on - strand at 1607.663 kb on - strand at 1607.736 kb on - strand at 1607.736 kb on - strand at 1607.774 kb on + strand at 1607.807 kb on + strand at 1607.834 kb on + strand at 1607.838 kb on + strand at 1607.838 kb on + strand at 1607.838 kb on + strand at 1607.839 kb on - strand at 1607.879 kb on - strand, within CA264_06955 at 1607.879 kb on - strand, within CA264_06955 at 1607.880 kb on + strand, within CA264_06955 at 1607.930 kb on + strand, within CA264_06955 at 1607.931 kb on - strand, within CA264_06955
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,605,263 + CA264_06940 0.46 -0.5 1,605,263 + CA264_06940 0.46 -0.8 1,605,269 - CA264_06940 0.46 +0.6 1,605,269 - CA264_06940 0.46 -0.4 1,605,322 + CA264_06940 0.52 +0.3 1,605,330 + CA264_06940 0.53 +1.6 1,605,331 - CA264_06940 0.53 -1.2 1,605,439 + +1.0 1,605,457 + CA264_06940 0.68 +0.3 1,605,571 + CA264_06940 0.80 -0.6 1,605,591 + CA264_06940 0.83 +1.0 1,605,591 + CA264_06940 0.83 -0.8 1,605,592 - CA264_06940 0.83 +0.7 1,605,592 - CA264_06940 0.83 -0.5 1,605,592 - CA264_06940 0.83 -0.2 1,605,592 - CA264_06940 0.83 -0.1 1,605,649 + CA264_06940 0.89 +0.1 1,605,667 + -0.1 1,605,734 + -1.0 1,605,739 + -0.6 1,605,746 + +0.4 1,605,746 + -0.2 1,605,747 - -0.0 1,605,764 - -0.3 1,605,764 - -0.4 1,605,767 + -0.5 1,605,767 + +0.1 1,605,768 - -2.3 1,605,769 + -1.0 1,605,769 + +0.5 1,605,769 + +1.0 1,605,770 - -1.2 1,605,770 - +0.5 1,605,770 - +0.2 1,605,770 - -0.3 1,605,770 - +0.2 1,605,773 + +0.2 1,605,828 + +0.0 1,605,828 + -1.1 1,605,829 - +0.6 1,605,864 - -0.2 1,605,895 + -0.5 1,605,896 - +1.2 1,605,906 + +0.4 1,605,907 - +0.0 1,606,058 + -0.3 1,606,058 + +0.8 1,606,059 - +0.6 1,606,059 - -0.8 1,606,059 - +0.1 1,606,061 + +0.2 1,606,062 - +1.0 1,606,062 - -0.9 1,606,121 + +1.0 1,606,121 + -0.5 1,606,122 - -0.3 1,606,122 - +0.6 1,606,127 + +0.2 1,606,211 - -0.1 1,606,233 - -0.2 1,606,314 - CA264_06945 0.11 -2.5 1,606,322 + CA264_06945 0.12 -1.3 1,606,540 - CA264_06945 0.40 +0.1 1,606,540 - CA264_06945 0.40 -0.2 1,606,605 - CA264_06945 0.48 -0.2 1,606,654 + CA264_06945 0.54 +0.8 1,606,654 + CA264_06945 0.54 -0.2 1,606,681 + CA264_06945 0.58 -1.3 1,606,791 + CA264_06945 0.72 +0.8 1,606,886 + CA264_06945 0.84 -0.7 1,606,886 + CA264_06945 0.84 +0.2 1,606,886 + CA264_06945 0.84 +0.2 1,606,947 - -0.4 1,607,086 + -0.0 1,607,086 + -0.1 1,607,156 + CA264_06950 0.15 -0.3 1,607,156 + CA264_06950 0.15 -0.1 1,607,225 + CA264_06950 0.27 +0.7 1,607,296 - CA264_06950 0.39 +0.2 1,607,432 + CA264_06950 0.62 +0.5 1,607,465 - CA264_06950 0.68 -0.1 1,607,465 - CA264_06950 0.68 -0.9 1,607,532 - CA264_06950 0.79 +0.8 1,607,658 + -0.1 1,607,662 + -1.0 1,607,663 - -1.5 1,607,663 - +0.1 1,607,663 - -0.4 1,607,736 - +0.0 1,607,736 - -0.7 1,607,774 + -0.5 1,607,807 + -0.0 1,607,834 + -0.4 1,607,838 + -1.2 1,607,838 + -0.1 1,607,838 + -0.7 1,607,839 - +0.2 1,607,879 - CA264_06955 0.11 +0.2 1,607,879 - CA264_06955 0.11 +0.0 1,607,880 + CA264_06955 0.11 -0.3 1,607,930 + CA264_06955 0.16 -1.1 1,607,931 - CA264_06955 0.16 -0.6
Or see this region's nucleotide sequence