Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06520 and CA264_06525 overlap by 11 nucleotides CA264_06525 and CA264_06530 are separated by 180 nucleotides CA264_06530 and CA264_06535 are separated by 21 nucleotides
CA264_06520: CA264_06520 - DUF4440 domain-containing protein, at 1,506,156 to 1,506,605
_06520
CA264_06525: CA264_06525 - monofunctional biosynthetic peptidoglycan transglycosylase, at 1,506,595 to 1,507,329
_06525
CA264_06530: CA264_06530 - peptidase, at 1,507,510 to 1,508,154
_06530
CA264_06535: CA264_06535 - metallophosphoesterase, at 1,508,176 to 1,509,390
_06535
Position (kb)
1507
1508
1509 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1506.528 kb on + strand, within CA264_06520 at 1506.529 kb on - strand, within CA264_06520 at 1506.571 kb on - strand at 1506.571 kb on - strand at 1506.589 kb on + strand at 1506.589 kb on + strand at 1506.633 kb on - strand at 1506.633 kb on - strand at 1506.633 kb on - strand at 1506.745 kb on + strand, within CA264_06525 at 1506.794 kb on + strand, within CA264_06525 at 1506.794 kb on - strand, within CA264_06525 at 1506.795 kb on - strand, within CA264_06525 at 1506.854 kb on + strand, within CA264_06525 at 1506.854 kb on + strand, within CA264_06525 at 1506.856 kb on + strand, within CA264_06525 at 1506.856 kb on + strand, within CA264_06525 at 1506.856 kb on + strand, within CA264_06525 at 1506.856 kb on + strand, within CA264_06525 at 1506.857 kb on - strand, within CA264_06525 at 1506.903 kb on + strand, within CA264_06525 at 1506.904 kb on - strand, within CA264_06525 at 1506.904 kb on - strand, within CA264_06525 at 1506.932 kb on + strand, within CA264_06525 at 1506.933 kb on - strand, within CA264_06525 at 1506.999 kb on + strand, within CA264_06525 at 1507.038 kb on + strand, within CA264_06525 at 1507.038 kb on + strand, within CA264_06525 at 1507.105 kb on + strand, within CA264_06525 at 1507.106 kb on - strand, within CA264_06525 at 1507.140 kb on + strand, within CA264_06525 at 1507.270 kb on - strand at 1507.282 kb on + strand at 1507.298 kb on - strand at 1507.298 kb on - strand at 1507.388 kb on + strand at 1507.388 kb on + strand at 1507.388 kb on + strand at 1507.394 kb on + strand at 1507.394 kb on + strand at 1507.394 kb on + strand at 1507.395 kb on - strand at 1507.477 kb on + strand at 1507.478 kb on - strand at 1507.483 kb on + strand at 1507.484 kb on - strand at 1507.493 kb on - strand at 1507.496 kb on + strand at 1507.496 kb on + strand at 1507.496 kb on + strand at 1507.496 kb on + strand at 1507.496 kb on + strand at 1507.496 kb on + strand at 1507.497 kb on - strand at 1507.497 kb on - strand at 1507.497 kb on - strand at 1507.497 kb on - strand at 1507.523 kb on + strand at 1507.523 kb on + strand at 1507.529 kb on - strand at 1507.676 kb on + strand, within CA264_06530 at 1507.677 kb on - strand, within CA264_06530 at 1507.811 kb on - strand, within CA264_06530 at 1507.832 kb on + strand, within CA264_06530 at 1507.832 kb on + strand, within CA264_06530 at 1507.836 kb on - strand, within CA264_06530 at 1507.889 kb on + strand, within CA264_06530 at 1508.018 kb on + strand, within CA264_06530 at 1508.018 kb on + strand, within CA264_06530 at 1508.048 kb on + strand, within CA264_06530 at 1508.048 kb on + strand, within CA264_06530 at 1508.058 kb on - strand, within CA264_06530 at 1508.173 kb on + strand at 1508.174 kb on - strand at 1508.186 kb on - strand at 1508.218 kb on - strand at 1508.218 kb on - strand at 1508.250 kb on + strand at 1508.250 kb on + strand at 1508.250 kb on + strand at 1508.251 kb on - strand at 1508.251 kb on - strand at 1508.251 kb on - strand at 1508.251 kb on - strand at 1508.251 kb on - strand at 1508.251 kb on - strand at 1508.465 kb on - strand, within CA264_06535 at 1508.542 kb on - strand, within CA264_06535 at 1508.674 kb on + strand, within CA264_06535 at 1508.675 kb on - strand, within CA264_06535 at 1508.675 kb on - strand, within CA264_06535 at 1508.704 kb on - strand, within CA264_06535 at 1508.745 kb on + strand, within CA264_06535 at 1508.746 kb on - strand, within CA264_06535 at 1508.794 kb on + strand, within CA264_06535 at 1508.794 kb on + strand at 1508.817 kb on - strand, within CA264_06535 at 1508.817 kb on - strand, within CA264_06535 at 1508.878 kb on - strand, within CA264_06535 at 1508.878 kb on - strand, within CA264_06535 at 1508.934 kb on - strand, within CA264_06535 at 1508.976 kb on - strand, within CA264_06535 at 1508.977 kb on + strand, within CA264_06535 at 1508.977 kb on + strand, within CA264_06535 at 1508.977 kb on + strand, within CA264_06535 at 1508.977 kb on + strand, within CA264_06535 at 1508.978 kb on - strand, within CA264_06535 at 1508.978 kb on - strand, within CA264_06535 at 1508.978 kb on - strand, within CA264_06535 at 1508.978 kb on - strand, within CA264_06535 at 1508.978 kb on - strand, within CA264_06535 at 1509.061 kb on + strand, within CA264_06535 at 1509.105 kb on + strand, within CA264_06535 at 1509.105 kb on + strand, within CA264_06535 at 1509.105 kb on + strand, within CA264_06535 at 1509.106 kb on - strand, within CA264_06535 at 1509.106 kb on - strand, within CA264_06535 at 1509.118 kb on + strand, within CA264_06535 at 1509.118 kb on + strand, within CA264_06535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,506,528 + CA264_06520 0.83 -0.3 1,506,529 - CA264_06520 0.83 +0.1 1,506,571 - +0.6 1,506,571 - -1.5 1,506,589 + +0.3 1,506,589 + +0.1 1,506,633 - -0.2 1,506,633 - +0.6 1,506,633 - +0.1 1,506,745 + CA264_06525 0.20 -1.1 1,506,794 + CA264_06525 0.27 -0.2 1,506,794 - CA264_06525 0.27 -0.2 1,506,795 - CA264_06525 0.27 +0.0 1,506,854 + CA264_06525 0.35 -1.1 1,506,854 + CA264_06525 0.35 +0.2 1,506,856 + CA264_06525 0.36 +0.0 1,506,856 + CA264_06525 0.36 +1.2 1,506,856 + CA264_06525 0.36 +1.2 1,506,856 + CA264_06525 0.36 -0.7 1,506,857 - CA264_06525 0.36 +0.3 1,506,903 + CA264_06525 0.42 -0.4 1,506,904 - CA264_06525 0.42 -0.7 1,506,904 - CA264_06525 0.42 +0.5 1,506,932 + CA264_06525 0.46 +0.1 1,506,933 - CA264_06525 0.46 +0.2 1,506,999 + CA264_06525 0.55 -0.2 1,507,038 + CA264_06525 0.60 -0.3 1,507,038 + CA264_06525 0.60 +0.1 1,507,105 + CA264_06525 0.69 +0.3 1,507,106 - CA264_06525 0.70 -1.6 1,507,140 + CA264_06525 0.74 -0.3 1,507,270 - -0.0 1,507,282 + -0.0 1,507,298 - -0.7 1,507,298 - +0.4 1,507,388 + +1.4 1,507,388 + -2.7 1,507,388 + +1.3 1,507,394 + -0.2 1,507,394 + -1.1 1,507,394 + +0.0 1,507,395 - +0.3 1,507,477 + +0.8 1,507,478 - -0.3 1,507,483 + +1.2 1,507,484 - -0.4 1,507,493 - +0.4 1,507,496 + +0.0 1,507,496 + +1.3 1,507,496 + +0.6 1,507,496 + -0.0 1,507,496 + +0.1 1,507,496 + +1.1 1,507,497 - +0.6 1,507,497 - +0.4 1,507,497 - -1.0 1,507,497 - +0.1 1,507,523 + +0.5 1,507,523 + -0.3 1,507,529 - -0.2 1,507,676 + CA264_06530 0.26 -0.6 1,507,677 - CA264_06530 0.26 +1.5 1,507,811 - CA264_06530 0.47 +0.9 1,507,832 + CA264_06530 0.50 +0.1 1,507,832 + CA264_06530 0.50 +0.4 1,507,836 - CA264_06530 0.51 -1.3 1,507,889 + CA264_06530 0.59 +0.3 1,508,018 + CA264_06530 0.79 +0.1 1,508,018 + CA264_06530 0.79 +0.2 1,508,048 + CA264_06530 0.83 +0.7 1,508,048 + CA264_06530 0.83 +0.4 1,508,058 - CA264_06530 0.85 -0.9 1,508,173 + +0.0 1,508,174 - +0.8 1,508,186 - -0.7 1,508,218 - -1.8 1,508,218 - -1.1 1,508,250 + +0.4 1,508,250 + -0.2 1,508,250 + -1.1 1,508,251 - -0.2 1,508,251 - -0.2 1,508,251 - -0.2 1,508,251 - -0.2 1,508,251 - -0.6 1,508,251 - +0.0 1,508,465 - CA264_06535 0.24 -0.1 1,508,542 - CA264_06535 0.30 +0.7 1,508,674 + CA264_06535 0.41 -0.7 1,508,675 - CA264_06535 0.41 -0.5 1,508,675 - CA264_06535 0.41 +0.7 1,508,704 - CA264_06535 0.43 +1.9 1,508,745 + CA264_06535 0.47 +1.2 1,508,746 - CA264_06535 0.47 -0.4 1,508,794 + CA264_06535 0.51 -1.1 1,508,794 + -0.5 1,508,817 - CA264_06535 0.53 -1.1 1,508,817 - CA264_06535 0.53 -0.5 1,508,878 - CA264_06535 0.58 -0.2 1,508,878 - CA264_06535 0.58 +0.9 1,508,934 - CA264_06535 0.62 -0.7 1,508,976 - CA264_06535 0.66 -1.1 1,508,977 + CA264_06535 0.66 -0.5 1,508,977 + CA264_06535 0.66 -0.4 1,508,977 + CA264_06535 0.66 +0.6 1,508,977 + CA264_06535 0.66 -0.8 1,508,978 - CA264_06535 0.66 -0.4 1,508,978 - CA264_06535 0.66 -2.0 1,508,978 - CA264_06535 0.66 -0.5 1,508,978 - CA264_06535 0.66 -0.3 1,508,978 - CA264_06535 0.66 -0.0 1,509,061 + CA264_06535 0.73 +0.1 1,509,105 + CA264_06535 0.76 -1.3 1,509,105 + CA264_06535 0.76 -0.0 1,509,105 + CA264_06535 0.76 +1.5 1,509,106 - CA264_06535 0.77 +0.5 1,509,106 - CA264_06535 0.77 -0.6 1,509,118 + CA264_06535 0.78 -0.5 1,509,118 + CA264_06535 0.78 -0.2
Or see this region's nucleotide sequence