Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06290 and CA264_06295 are separated by 122 nucleotides CA264_06295 and CA264_06300 are separated by 27 nucleotides
CA264_06290: CA264_06290 - amino-acid racemase, at 1,463,714 to 1,464,787
_06290
CA264_06295: CA264_06295 - carbonic anhydrase, at 1,464,910 to 1,465,533
_06295
CA264_06300: CA264_06300 - universal stress protein UspA, at 1,465,561 to 1,466,481
_06300
Position (kb)
1464
1465
1466 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1463.940 kb on - strand, within CA264_06290 at 1463.941 kb on + strand, within CA264_06290 at 1463.942 kb on - strand, within CA264_06290 at 1463.944 kb on - strand, within CA264_06290 at 1463.977 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.984 kb on + strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.246 kb on - strand, within CA264_06290 at 1464.495 kb on + strand, within CA264_06290 at 1464.588 kb on + strand, within CA264_06290 at 1464.688 kb on + strand at 1464.688 kb on + strand at 1464.693 kb on - strand at 1464.693 kb on - strand at 1464.695 kb on - strand at 1464.695 kb on - strand at 1464.729 kb on - strand at 1464.731 kb on - strand at 1464.791 kb on + strand at 1464.821 kb on - strand at 1464.822 kb on + strand at 1464.868 kb on + strand at 1464.868 kb on + strand at 1464.880 kb on - strand at 1464.890 kb on + strand at 1464.899 kb on + strand at 1464.899 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.905 kb on + strand at 1464.905 kb on + strand at 1464.906 kb on - strand at 1464.906 kb on - strand at 1464.906 kb on - strand at 1464.910 kb on - strand at 1464.910 kb on - strand at 1464.916 kb on + strand at 1465.025 kb on - strand, within CA264_06295 at 1465.033 kb on - strand, within CA264_06295 at 1465.098 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.197 kb on + strand, within CA264_06295 at 1465.197 kb on + strand, within CA264_06295 at 1465.211 kb on - strand, within CA264_06295 at 1465.211 kb on - strand, within CA264_06295 at 1465.294 kb on + strand, within CA264_06295 at 1465.294 kb on + strand, within CA264_06295 at 1465.295 kb on - strand, within CA264_06295 at 1465.300 kb on - strand, within CA264_06295 at 1465.305 kb on + strand, within CA264_06295 at 1465.306 kb on - strand, within CA264_06295 at 1465.543 kb on - strand at 1465.612 kb on - strand at 1465.839 kb on + strand, within CA264_06300 at 1465.843 kb on - strand, within CA264_06300 at 1465.889 kb on + strand, within CA264_06300 at 1465.890 kb on - strand, within CA264_06300 at 1465.928 kb on + strand, within CA264_06300 at 1466.007 kb on - strand, within CA264_06300 at 1466.099 kb on - strand, within CA264_06300 at 1466.146 kb on + strand, within CA264_06300 at 1466.146 kb on + strand, within CA264_06300 at 1466.147 kb on - strand, within CA264_06300 at 1466.162 kb on - strand, within CA264_06300 at 1466.216 kb on - strand, within CA264_06300 at 1466.227 kb on + strand, within CA264_06300 at 1466.228 kb on - strand, within CA264_06300 at 1466.271 kb on + strand, within CA264_06300 at 1466.272 kb on - strand, within CA264_06300 at 1466.329 kb on + strand, within CA264_06300 at 1466.383 kb on + strand, within CA264_06300 at 1466.415 kb on - strand at 1466.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,463,940 - CA264_06290 0.21 -2.0 1,463,941 + CA264_06290 0.21 -2.1 1,463,942 - CA264_06290 0.21 -2.6 1,463,944 - CA264_06290 0.21 -1.1 1,463,977 + CA264_06290 0.24 -3.2 1,463,979 + CA264_06290 0.25 -1.1 1,463,979 + CA264_06290 0.25 -2.7 1,463,980 - CA264_06290 0.25 +0.1 1,463,980 - CA264_06290 0.25 +1.1 1,463,984 + CA264_06290 0.25 -1.9 1,464,191 - CA264_06290 0.44 -3.1 1,464,191 - CA264_06290 0.44 -0.7 1,464,237 + CA264_06290 0.49 -0.7 1,464,237 + CA264_06290 0.49 -0.3 1,464,237 + CA264_06290 0.49 -0.3 1,464,246 - CA264_06290 0.50 -2.5 1,464,495 + CA264_06290 0.73 -1.9 1,464,588 + CA264_06290 0.81 -2.9 1,464,688 + -3.3 1,464,688 + -0.4 1,464,693 - -3.4 1,464,693 - -1.4 1,464,695 - -3.8 1,464,695 - -2.8 1,464,729 - -1.6 1,464,731 - -3.2 1,464,791 + +0.4 1,464,821 - -1.1 1,464,822 + -0.2 1,464,868 + -0.5 1,464,868 + +0.9 1,464,880 - -0.3 1,464,890 + -0.4 1,464,899 + +0.1 1,464,899 + -1.1 1,464,901 + +0.6 1,464,901 + +0.4 1,464,901 + -0.9 1,464,901 + +0.5 1,464,901 + -0.8 1,464,901 + +0.5 1,464,905 + -0.0 1,464,905 + -0.6 1,464,906 - -0.1 1,464,906 - -0.7 1,464,906 - -0.3 1,464,910 - -0.7 1,464,910 - +2.1 1,464,916 + +0.1 1,465,025 - CA264_06295 0.18 -0.0 1,465,033 - CA264_06295 0.20 -0.4 1,465,098 + CA264_06295 0.30 -1.5 1,465,191 + CA264_06295 0.45 +2.1 1,465,191 + CA264_06295 0.45 -0.9 1,465,191 + CA264_06295 0.45 -0.3 1,465,191 + CA264_06295 0.45 -0.2 1,465,192 - CA264_06295 0.45 +0.7 1,465,192 - CA264_06295 0.45 -1.0 1,465,192 - CA264_06295 0.45 -0.4 1,465,192 - CA264_06295 0.45 +0.7 1,465,197 + CA264_06295 0.46 +0.2 1,465,197 + CA264_06295 0.46 -0.4 1,465,211 - CA264_06295 0.48 +0.1 1,465,211 - CA264_06295 0.48 -0.1 1,465,294 + CA264_06295 0.62 -0.1 1,465,294 + CA264_06295 0.62 +1.4 1,465,295 - CA264_06295 0.62 -0.2 1,465,300 - CA264_06295 0.62 +0.6 1,465,305 + CA264_06295 0.63 -0.1 1,465,306 - CA264_06295 0.63 -0.3 1,465,543 - -0.8 1,465,612 - -0.8 1,465,839 + CA264_06300 0.30 -0.5 1,465,843 - CA264_06300 0.31 +0.3 1,465,889 + CA264_06300 0.36 -0.3 1,465,890 - CA264_06300 0.36 +0.0 1,465,928 + CA264_06300 0.40 +0.7 1,466,007 - CA264_06300 0.48 -1.1 1,466,099 - CA264_06300 0.58 -0.7 1,466,146 + CA264_06300 0.64 -0.5 1,466,146 + CA264_06300 0.64 -1.5 1,466,147 - CA264_06300 0.64 -1.2 1,466,162 - CA264_06300 0.65 +0.3 1,466,216 - CA264_06300 0.71 -0.2 1,466,227 + CA264_06300 0.72 -1.6 1,466,228 - CA264_06300 0.72 -0.4 1,466,271 + CA264_06300 0.77 -0.8 1,466,272 - CA264_06300 0.77 +0.1 1,466,329 + CA264_06300 0.83 -0.3 1,466,383 + CA264_06300 0.89 -0.4 1,466,415 - +0.0 1,466,508 - +0.3
Or see this region's nucleotide sequence