Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06050 and CA264_06055 are separated by 218 nucleotides CA264_06055 and CA264_06060 are separated by 218 nucleotides
CA264_06050: CA264_06050 - ATP-dependent RNA helicase, at 1,413,645 to 1,415,021
_06050
CA264_06055: CA264_06055 - DNA recombination protein RmuC, at 1,415,240 to 1,416,565
_06055
CA264_06060: CA264_06060 - peptidase, at 1,416,784 to 1,418,613
_06060
Position (kb)
1415
1416
1417 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1414.256 kb on - strand, within CA264_06050 at 1414.294 kb on - strand, within CA264_06050 at 1414.419 kb on + strand, within CA264_06050 at 1414.420 kb on - strand, within CA264_06050 at 1414.431 kb on + strand, within CA264_06050 at 1414.561 kb on + strand, within CA264_06050 at 1414.561 kb on + strand at 1414.562 kb on - strand, within CA264_06050 at 1414.562 kb on - strand, within CA264_06050 at 1414.562 kb on - strand, within CA264_06050 at 1414.588 kb on - strand, within CA264_06050 at 1414.666 kb on - strand, within CA264_06050 at 1414.676 kb on - strand, within CA264_06050 at 1414.724 kb on - strand, within CA264_06050 at 1414.728 kb on - strand, within CA264_06050 at 1414.777 kb on + strand, within CA264_06050 at 1414.777 kb on + strand, within CA264_06050 at 1414.777 kb on + strand, within CA264_06050 at 1414.985 kb on - strand at 1415.005 kb on + strand at 1415.005 kb on + strand at 1415.005 kb on + strand at 1415.006 kb on - strand at 1415.006 kb on - strand at 1415.006 kb on - strand at 1415.010 kb on + strand at 1415.011 kb on - strand at 1415.011 kb on - strand at 1415.037 kb on - strand at 1415.038 kb on + strand at 1415.077 kb on + strand at 1415.078 kb on - strand at 1415.112 kb on + strand at 1415.112 kb on + strand at 1415.113 kb on - strand at 1415.145 kb on + strand at 1415.146 kb on - strand at 1415.146 kb on - strand at 1415.175 kb on - strand at 1415.175 kb on - strand at 1415.218 kb on + strand at 1415.229 kb on - strand at 1415.229 kb on - strand at 1415.248 kb on - strand at 1415.258 kb on - strand at 1415.350 kb on - strand at 1415.351 kb on - strand at 1415.407 kb on - strand, within CA264_06055 at 1415.722 kb on + strand, within CA264_06055 at 1415.722 kb on + strand, within CA264_06055 at 1415.928 kb on - strand, within CA264_06055 at 1415.972 kb on - strand, within CA264_06055 at 1415.972 kb on - strand, within CA264_06055 at 1416.046 kb on - strand, within CA264_06055 at 1416.153 kb on - strand, within CA264_06055 at 1416.210 kb on + strand, within CA264_06055 at 1416.210 kb on + strand, within CA264_06055 at 1416.211 kb on - strand, within CA264_06055 at 1416.633 kb on + strand at 1416.634 kb on - strand at 1416.634 kb on - strand at 1416.647 kb on - strand at 1416.648 kb on + strand at 1416.706 kb on + strand at 1416.707 kb on - strand at 1416.752 kb on + strand at 1416.753 kb on - strand at 1416.754 kb on + strand at 1416.758 kb on - strand at 1416.770 kb on - strand at 1416.770 kb on - strand at 1416.777 kb on + strand at 1416.937 kb on + strand at 1416.949 kb on + strand at 1416.949 kb on + strand at 1416.982 kb on - strand, within CA264_06060 at 1416.982 kb on - strand, within CA264_06060 at 1416.982 kb on - strand, within CA264_06060 at 1417.130 kb on + strand, within CA264_06060 at 1417.130 kb on + strand, within CA264_06060 at 1417.131 kb on - strand, within CA264_06060 at 1417.149 kb on - strand, within CA264_06060 at 1417.182 kb on - strand, within CA264_06060 at 1417.294 kb on - strand, within CA264_06060 at 1417.426 kb on + strand, within CA264_06060 at 1417.436 kb on - strand, within CA264_06060 at 1417.543 kb on + strand, within CA264_06060 at 1417.544 kb on - strand, within CA264_06060
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,414,256 - CA264_06050 0.44 -0.6 1,414,294 - CA264_06050 0.47 +0.3 1,414,419 + CA264_06050 0.56 -0.1 1,414,420 - CA264_06050 0.56 +0.2 1,414,431 + CA264_06050 0.57 -0.6 1,414,561 + CA264_06050 0.67 -1.2 1,414,561 + +0.1 1,414,562 - CA264_06050 0.67 -0.1 1,414,562 - CA264_06050 0.67 +0.3 1,414,562 - CA264_06050 0.67 +0.2 1,414,588 - CA264_06050 0.68 -0.6 1,414,666 - CA264_06050 0.74 +0.1 1,414,676 - CA264_06050 0.75 -0.9 1,414,724 - CA264_06050 0.78 -0.6 1,414,728 - CA264_06050 0.79 +0.2 1,414,777 + CA264_06050 0.82 -0.7 1,414,777 + CA264_06050 0.82 +0.6 1,414,777 + CA264_06050 0.82 +0.3 1,414,985 - -0.0 1,415,005 + +0.3 1,415,005 + +0.3 1,415,005 + -0.1 1,415,006 - -0.7 1,415,006 - -1.0 1,415,006 - +1.2 1,415,010 + -0.3 1,415,011 - -0.3 1,415,011 - +1.3 1,415,037 - -0.3 1,415,038 + -0.5 1,415,077 + +0.3 1,415,078 - -0.4 1,415,112 + +0.1 1,415,112 + -0.6 1,415,113 - -0.4 1,415,145 + -0.2 1,415,146 - -0.1 1,415,146 - -0.4 1,415,175 - -1.1 1,415,175 - -0.4 1,415,218 + -2.0 1,415,229 - -0.6 1,415,229 - -0.4 1,415,248 - +0.1 1,415,258 - -0.7 1,415,350 - -0.8 1,415,351 - -0.1 1,415,407 - CA264_06055 0.13 -0.6 1,415,722 + CA264_06055 0.36 +0.8 1,415,722 + CA264_06055 0.36 -0.4 1,415,928 - CA264_06055 0.52 +0.2 1,415,972 - CA264_06055 0.55 -0.9 1,415,972 - CA264_06055 0.55 +0.2 1,416,046 - CA264_06055 0.61 -2.6 1,416,153 - CA264_06055 0.69 -1.4 1,416,210 + CA264_06055 0.73 +2.7 1,416,210 + CA264_06055 0.73 -0.1 1,416,211 - CA264_06055 0.73 -0.3 1,416,633 + -1.9 1,416,634 - -0.6 1,416,634 - -0.6 1,416,647 - +0.4 1,416,648 + -2.2 1,416,706 + +0.1 1,416,707 - -0.9 1,416,752 + -0.6 1,416,753 - -1.1 1,416,754 + -1.1 1,416,758 - +0.4 1,416,770 - +0.1 1,416,770 - +0.5 1,416,777 + -0.7 1,416,937 + -0.0 1,416,949 + -0.2 1,416,949 + -0.1 1,416,982 - CA264_06060 0.11 -0.7 1,416,982 - CA264_06060 0.11 -0.4 1,416,982 - CA264_06060 0.11 +0.6 1,417,130 + CA264_06060 0.19 -1.2 1,417,130 + CA264_06060 0.19 +0.4 1,417,131 - CA264_06060 0.19 -0.2 1,417,149 - CA264_06060 0.20 +0.6 1,417,182 - CA264_06060 0.22 +0.2 1,417,294 - CA264_06060 0.28 +0.6 1,417,426 + CA264_06060 0.35 -0.7 1,417,436 - CA264_06060 0.36 +0.5 1,417,543 + CA264_06060 0.41 -0.6 1,417,544 - CA264_06060 0.42 +0.5
Or see this region's nucleotide sequence