Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05610 and CA264_05615 are separated by 48 nucleotides CA264_05615 and CA264_05620 are separated by 96 nucleotides CA264_05620 and CA264_05625 are separated by 153 nucleotides CA264_05625 and CA264_05630 are separated by 54 nucleotides
CA264_05610: CA264_05610 - rRNA methyltransferase, at 1,304,255 to 1,305,655
_05610
CA264_05615: CA264_05615 - NUDIX hydrolase, at 1,305,704 to 1,306,090
_05615
CA264_05620: CA264_05620 - hypothetical protein, at 1,306,187 to 1,307,167
_05620
CA264_05625: CA264_05625 - hypothetical protein, at 1,307,321 to 1,307,851
_05625
CA264_05630: CA264_05630 - glycerol-3-phosphate dehydrogenase, at 1,307,906 to 1,308,895
_05630
Position (kb)
1306
1307
1308 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1305.241 kb on + strand, within CA264_05610 at 1305.242 kb on - strand, within CA264_05610 at 1305.296 kb on + strand, within CA264_05610 at 1305.371 kb on + strand, within CA264_05610 at 1305.423 kb on + strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.726 kb on + strand at 1305.765 kb on + strand, within CA264_05615 at 1305.765 kb on + strand, within CA264_05615 at 1305.765 kb on + strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.821 kb on + strand, within CA264_05615 at 1305.849 kb on + strand, within CA264_05615 at 1305.850 kb on - strand, within CA264_05615 at 1305.854 kb on + strand, within CA264_05615 at 1305.888 kb on - strand, within CA264_05615 at 1305.929 kb on - strand, within CA264_05615 at 1306.079 kb on + strand at 1306.079 kb on + strand at 1306.080 kb on - strand at 1306.080 kb on - strand at 1306.083 kb on - strand at 1306.109 kb on + strand at 1306.122 kb on - strand at 1306.148 kb on + strand at 1306.215 kb on + strand at 1306.215 kb on + strand at 1306.216 kb on - strand at 1306.223 kb on - strand at 1306.224 kb on + strand at 1306.244 kb on - strand at 1306.253 kb on + strand at 1306.273 kb on + strand at 1306.274 kb on - strand at 1306.484 kb on - strand, within CA264_05620 at 1306.487 kb on + strand, within CA264_05620 at 1306.539 kb on + strand, within CA264_05620 at 1306.605 kb on + strand, within CA264_05620 at 1306.633 kb on - strand, within CA264_05620 at 1306.831 kb on - strand, within CA264_05620 at 1306.847 kb on + strand, within CA264_05620 at 1306.951 kb on - strand, within CA264_05620 at 1306.951 kb on - strand, within CA264_05620 at 1306.962 kb on + strand, within CA264_05620 at 1307.030 kb on - strand, within CA264_05620 at 1307.068 kb on - strand, within CA264_05620 at 1307.078 kb on + strand at 1307.144 kb on + strand at 1307.144 kb on + strand at 1307.144 kb on + strand at 1307.170 kb on - strand at 1307.170 kb on - strand at 1307.185 kb on + strand at 1307.190 kb on - strand at 1307.201 kb on + strand at 1307.202 kb on - strand at 1307.232 kb on - strand at 1307.308 kb on - strand at 1307.315 kb on - strand at 1307.320 kb on + strand at 1307.321 kb on - strand at 1307.413 kb on + strand, within CA264_05625 at 1307.413 kb on + strand, within CA264_05625 at 1307.413 kb on + strand, within CA264_05625 at 1307.414 kb on - strand, within CA264_05625 at 1307.415 kb on + strand, within CA264_05625 at 1307.415 kb on + strand, within CA264_05625 at 1307.415 kb on + strand, within CA264_05625 at 1307.415 kb on + strand, within CA264_05625 at 1307.416 kb on - strand, within CA264_05625 at 1307.457 kb on - strand, within CA264_05625 at 1307.482 kb on + strand, within CA264_05625 at 1307.505 kb on - strand, within CA264_05625 at 1307.691 kb on + strand, within CA264_05625 at 1307.692 kb on - strand, within CA264_05625 at 1307.744 kb on + strand, within CA264_05625 at 1307.794 kb on + strand, within CA264_05625 at 1307.795 kb on - strand, within CA264_05625 at 1307.795 kb on - strand, within CA264_05625 at 1307.848 kb on - strand at 1307.962 kb on - strand at 1307.966 kb on + strand at 1307.967 kb on - strand at 1307.973 kb on + strand at 1307.976 kb on - strand at 1308.042 kb on + strand, within CA264_05630 at 1308.145 kb on - strand, within CA264_05630 at 1308.155 kb on + strand, within CA264_05630
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,305,241 + CA264_05610 0.70 -0.1 1,305,242 - CA264_05610 0.70 -0.4 1,305,296 + CA264_05610 0.74 -1.4 1,305,371 + CA264_05610 0.80 -0.9 1,305,423 + CA264_05610 0.83 -0.3 1,305,424 - CA264_05610 0.83 -1.5 1,305,424 - CA264_05610 0.83 -0.8 1,305,424 - CA264_05610 0.83 -0.4 1,305,424 - CA264_05610 0.83 -0.2 1,305,424 - CA264_05610 0.83 -3.1 1,305,726 + -0.1 1,305,765 + CA264_05615 0.16 +0.6 1,305,765 + CA264_05615 0.16 -1.5 1,305,765 + CA264_05615 0.16 +0.6 1,305,766 - CA264_05615 0.16 +2.2 1,305,766 - CA264_05615 0.16 -0.2 1,305,766 - CA264_05615 0.16 +0.3 1,305,766 - CA264_05615 0.16 +0.1 1,305,766 - CA264_05615 0.16 -1.2 1,305,766 - CA264_05615 0.16 -0.2 1,305,821 + CA264_05615 0.30 -0.1 1,305,849 + CA264_05615 0.37 -0.2 1,305,850 - CA264_05615 0.38 +0.2 1,305,854 + CA264_05615 0.39 +0.2 1,305,888 - CA264_05615 0.48 -0.2 1,305,929 - CA264_05615 0.58 -0.3 1,306,079 + -0.5 1,306,079 + -0.0 1,306,080 - +0.8 1,306,080 - -0.5 1,306,083 - +0.1 1,306,109 + -0.4 1,306,122 - +0.3 1,306,148 + +0.9 1,306,215 + -0.2 1,306,215 + -0.5 1,306,216 - +0.8 1,306,223 - -1.1 1,306,224 + -0.3 1,306,244 - -0.3 1,306,253 + -0.0 1,306,273 + -0.4 1,306,274 - -1.0 1,306,484 - CA264_05620 0.30 -0.5 1,306,487 + CA264_05620 0.31 -0.6 1,306,539 + CA264_05620 0.36 -0.7 1,306,605 + CA264_05620 0.43 -0.3 1,306,633 - CA264_05620 0.45 +0.1 1,306,831 - CA264_05620 0.66 -0.1 1,306,847 + CA264_05620 0.67 -0.2 1,306,951 - CA264_05620 0.78 -1.1 1,306,951 - CA264_05620 0.78 +0.6 1,306,962 + CA264_05620 0.79 -0.2 1,307,030 - CA264_05620 0.86 -0.0 1,307,068 - CA264_05620 0.90 -0.2 1,307,078 + -1.2 1,307,144 + -0.2 1,307,144 + -1.3 1,307,144 + +0.1 1,307,170 - +1.7 1,307,170 - -0.1 1,307,185 + -0.7 1,307,190 - -1.8 1,307,201 + -0.2 1,307,202 - -0.6 1,307,232 - +0.2 1,307,308 - +0.3 1,307,315 - -0.2 1,307,320 + +0.4 1,307,321 - +0.3 1,307,413 + CA264_05625 0.17 -1.4 1,307,413 + CA264_05625 0.17 -0.7 1,307,413 + CA264_05625 0.17 -0.1 1,307,414 - CA264_05625 0.18 -0.3 1,307,415 + CA264_05625 0.18 +0.4 1,307,415 + CA264_05625 0.18 -0.4 1,307,415 + CA264_05625 0.18 +0.1 1,307,415 + CA264_05625 0.18 +0.4 1,307,416 - CA264_05625 0.18 -0.5 1,307,457 - CA264_05625 0.26 -0.9 1,307,482 + CA264_05625 0.30 +0.2 1,307,505 - CA264_05625 0.35 +0.0 1,307,691 + CA264_05625 0.70 +0.2 1,307,692 - CA264_05625 0.70 -0.7 1,307,744 + CA264_05625 0.80 -0.8 1,307,794 + CA264_05625 0.89 -0.2 1,307,795 - CA264_05625 0.89 -0.5 1,307,795 - CA264_05625 0.89 +2.4 1,307,848 - -0.1 1,307,962 - -0.2 1,307,966 + +1.0 1,307,967 - +0.2 1,307,973 + -1.5 1,307,976 - -0.2 1,308,042 + CA264_05630 0.14 -0.3 1,308,145 - CA264_05630 0.24 -0.0 1,308,155 + CA264_05630 0.25 +0.2
Or see this region's nucleotide sequence