Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05260 and CA264_05265 are separated by 17 nucleotides CA264_05265 and CA264_05270 are separated by 151 nucleotides CA264_05270 and CA264_05275 are separated by 723 nucleotides
CA264_05260: CA264_05260 - hypothetical protein, at 1,219,324 to 1,219,986
_05260
CA264_05265: CA264_05265 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 1,220,004 to 1,220,720
_05265
CA264_05270: CA264_05270 - phosphoenolpyruvate carboxykinase (ATP), at 1,220,872 to 1,222,485
_05270
CA264_05275: CA264_05275 - MFS transporter, at 1,223,209 to 1,224,657
_05275
Position (kb)
1220
1221
1222
1223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1219.911 kb on + strand, within CA264_05260 at 1219.917 kb on + strand, within CA264_05260 at 1219.919 kb on + strand, within CA264_05260 at 1219.954 kb on + strand at 1219.955 kb on - strand at 1219.955 kb on - strand at 1219.987 kb on - strand at 1219.997 kb on + strand at 1220.000 kb on - strand at 1220.000 kb on - strand at 1220.005 kb on + strand at 1220.006 kb on - strand at 1220.130 kb on + strand, within CA264_05265 at 1220.131 kb on - strand, within CA264_05265 at 1220.168 kb on + strand, within CA264_05265 at 1220.189 kb on - strand, within CA264_05265 at 1220.230 kb on - strand, within CA264_05265 at 1220.241 kb on - strand, within CA264_05265 at 1220.299 kb on - strand, within CA264_05265 at 1220.408 kb on + strand, within CA264_05265 at 1220.489 kb on + strand, within CA264_05265 at 1220.490 kb on - strand, within CA264_05265 at 1220.490 kb on - strand, within CA264_05265 at 1220.500 kb on + strand, within CA264_05265 at 1220.500 kb on + strand, within CA264_05265 at 1220.516 kb on - strand, within CA264_05265 at 1220.585 kb on - strand, within CA264_05265 at 1220.604 kb on + strand, within CA264_05265 at 1220.611 kb on + strand, within CA264_05265 at 1220.613 kb on + strand, within CA264_05265 at 1220.614 kb on - strand, within CA264_05265 at 1220.679 kb on - strand at 1220.712 kb on + strand at 1220.729 kb on + strand at 1220.733 kb on - strand at 1220.733 kb on - strand at 1220.777 kb on - strand at 1220.777 kb on - strand at 1220.777 kb on - strand at 1220.784 kb on + strand at 1220.787 kb on - strand at 1220.795 kb on - strand at 1222.520 kb on - strand at 1222.520 kb on - strand at 1222.531 kb on - strand at 1222.688 kb on - strand at 1222.720 kb on - strand at 1222.882 kb on - strand at 1222.914 kb on + strand at 1222.960 kb on + strand at 1222.976 kb on - strand at 1222.976 kb on - strand at 1222.979 kb on + strand at 1222.980 kb on - strand at 1222.983 kb on + strand at 1222.986 kb on - strand at 1223.140 kb on + strand at 1223.141 kb on - strand at 1223.151 kb on - strand at 1223.151 kb on - strand at 1223.198 kb on + strand at 1223.435 kb on - strand, within CA264_05275
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,219,911 + CA264_05260 0.89 +0.4 1,219,917 + CA264_05260 0.89 -0.2 1,219,919 + CA264_05260 0.90 -0.3 1,219,954 + +1.1 1,219,955 - -0.3 1,219,955 - -0.3 1,219,987 - -1.3 1,219,997 + +0.6 1,220,000 - +0.4 1,220,000 - +2.2 1,220,005 + +0.6 1,220,006 - -0.1 1,220,130 + CA264_05265 0.18 -1.4 1,220,131 - CA264_05265 0.18 -1.2 1,220,168 + CA264_05265 0.23 -1.0 1,220,189 - CA264_05265 0.26 -0.4 1,220,230 - CA264_05265 0.32 -0.9 1,220,241 - CA264_05265 0.33 -0.4 1,220,299 - CA264_05265 0.41 -0.9 1,220,408 + CA264_05265 0.56 -1.5 1,220,489 + CA264_05265 0.68 -0.8 1,220,490 - CA264_05265 0.68 -0.3 1,220,490 - CA264_05265 0.68 -1.1 1,220,500 + CA264_05265 0.69 -0.5 1,220,500 + CA264_05265 0.69 -0.4 1,220,516 - CA264_05265 0.71 +0.1 1,220,585 - CA264_05265 0.81 +1.5 1,220,604 + CA264_05265 0.84 -2.0 1,220,611 + CA264_05265 0.85 -0.4 1,220,613 + CA264_05265 0.85 +0.1 1,220,614 - CA264_05265 0.85 -0.2 1,220,679 - +1.2 1,220,712 + -0.7 1,220,729 + -0.9 1,220,733 - +0.4 1,220,733 - -0.4 1,220,777 - +0.4 1,220,777 - +0.2 1,220,777 - +0.6 1,220,784 + -0.1 1,220,787 - +1.2 1,220,795 - +0.0 1,222,520 - -1.1 1,222,520 - +1.4 1,222,531 - +0.4 1,222,688 - +0.2 1,222,720 - +2.2 1,222,882 - -0.4 1,222,914 + -1.7 1,222,960 + -0.2 1,222,976 - +2.0 1,222,976 - +0.8 1,222,979 + -0.3 1,222,980 - +0.7 1,222,983 + -0.6 1,222,986 - -0.3 1,223,140 + -0.5 1,223,141 - +0.7 1,223,151 - +0.5 1,223,151 - +0.1 1,223,198 + -0.5 1,223,435 - CA264_05275 0.16 -2.0
Or see this region's nucleotide sequence