Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04525 and CA264_04530 are separated by 699 nucleotides CA264_04530 and CA264_04535 are separated by 87 nucleotides
CA264_04525: CA264_04525 - DUF2279 domain-containing protein, at 1,045,004 to 1,045,843
_04525
CA264_04530: CA264_04530 - alpha-ketoacid dehydrogenase subunit beta, at 1,046,543 to 1,047,526
_04530
CA264_04535: CA264_04535 - hypothetical protein, at 1,047,614 to 1,049,398
_04535
Position (kb)
1046
1047
1048 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1045.557 kb on - strand, within CA264_04525 at 1045.557 kb on - strand, within CA264_04525 at 1045.616 kb on + strand, within CA264_04525 at 1045.616 kb on + strand, within CA264_04525 at 1045.616 kb on + strand, within CA264_04525 at 1045.617 kb on - strand, within CA264_04525 at 1045.617 kb on - strand, within CA264_04525 at 1045.619 kb on - strand, within CA264_04525 at 1045.728 kb on + strand, within CA264_04525 at 1045.756 kb on + strand, within CA264_04525 at 1045.756 kb on + strand, within CA264_04525 at 1045.757 kb on - strand, within CA264_04525 at 1045.757 kb on - strand, within CA264_04525 at 1045.757 kb on - strand, within CA264_04525 at 1045.762 kb on + strand at 1045.762 kb on + strand at 1045.762 kb on + strand at 1045.762 kb on + strand at 1045.763 kb on - strand at 1045.764 kb on + strand at 1045.764 kb on + strand at 1045.781 kb on - strand at 1045.822 kb on + strand at 1045.826 kb on + strand at 1045.844 kb on - strand at 1045.844 kb on - strand at 1045.844 kb on - strand at 1045.844 kb on - strand at 1045.883 kb on + strand at 1045.884 kb on - strand at 1045.885 kb on + strand at 1045.886 kb on - strand at 1045.886 kb on - strand at 1045.886 kb on - strand at 1045.922 kb on - strand at 1045.988 kb on + strand at 1045.988 kb on + strand at 1045.989 kb on - strand at 1045.989 kb on - strand at 1046.052 kb on + strand at 1046.083 kb on + strand at 1046.084 kb on - strand at 1046.084 kb on - strand at 1046.088 kb on + strand at 1046.089 kb on - strand at 1046.126 kb on + strand at 1046.126 kb on + strand at 1046.129 kb on + strand at 1046.129 kb on + strand at 1046.129 kb on + strand at 1046.130 kb on - strand at 1046.130 kb on - strand at 1046.177 kb on - strand at 1046.189 kb on - strand at 1046.190 kb on + strand at 1046.190 kb on + strand at 1046.190 kb on + strand at 1046.190 kb on + strand at 1046.191 kb on - strand at 1046.191 kb on - strand at 1046.191 kb on - strand at 1046.230 kb on - strand at 1046.379 kb on - strand at 1046.382 kb on + strand at 1046.382 kb on + strand at 1046.383 kb on - strand at 1046.390 kb on - strand at 1046.390 kb on - strand at 1046.390 kb on - strand at 1046.435 kb on + strand at 1046.435 kb on + strand at 1046.435 kb on + strand at 1046.436 kb on - strand at 1046.436 kb on - strand at 1046.436 kb on - strand at 1046.436 kb on - strand at 1046.436 kb on - strand at 1046.437 kb on + strand at 1046.437 kb on + strand at 1046.437 kb on + strand at 1046.438 kb on - strand at 1046.441 kb on + strand at 1046.442 kb on - strand at 1046.518 kb on + strand at 1046.533 kb on + strand at 1046.534 kb on - strand at 1046.538 kb on + strand at 1046.539 kb on - strand at 1047.528 kb on + strand at 1047.538 kb on - strand at 1047.557 kb on - strand at 1047.562 kb on + strand at 1047.581 kb on + strand at 1047.582 kb on - strand at 1047.609 kb on + strand at 1047.610 kb on - strand at 1047.636 kb on + strand at 1047.677 kb on + strand at 1047.678 kb on - strand at 1047.846 kb on + strand, within CA264_04535 at 1047.864 kb on + strand, within CA264_04535 at 1047.865 kb on - strand, within CA264_04535 at 1047.865 kb on - strand, within CA264_04535 at 1047.894 kb on + strand, within CA264_04535 at 1047.895 kb on - strand, within CA264_04535 at 1047.909 kb on + strand, within CA264_04535 at 1047.909 kb on + strand, within CA264_04535 at 1047.914 kb on - strand, within CA264_04535 at 1048.030 kb on - strand, within CA264_04535 at 1048.066 kb on - strand, within CA264_04535 at 1048.081 kb on + strand, within CA264_04535 at 1048.083 kb on + strand, within CA264_04535 at 1048.084 kb on - strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.088 kb on + strand, within CA264_04535 at 1048.089 kb on - strand, within CA264_04535 at 1048.135 kb on + strand, within CA264_04535 at 1048.213 kb on + strand, within CA264_04535 at 1048.215 kb on + strand, within CA264_04535 at 1048.371 kb on + strand, within CA264_04535 at 1048.444 kb on + strand, within CA264_04535 at 1048.444 kb on + strand, within CA264_04535 at 1048.445 kb on - strand, within CA264_04535 at 1048.446 kb on + strand, within CA264_04535 at 1048.459 kb on - strand, within CA264_04535 at 1048.523 kb on + strand, within CA264_04535 at 1048.524 kb on - strand, within CA264_04535
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,045,557 - CA264_04525 0.66 +0.3 1,045,557 - CA264_04525 0.66 -0.1 1,045,616 + CA264_04525 0.73 -2.4 1,045,616 + CA264_04525 0.73 +1.6 1,045,616 + CA264_04525 0.73 -0.5 1,045,617 - CA264_04525 0.73 +0.1 1,045,617 - CA264_04525 0.73 -0.5 1,045,619 - CA264_04525 0.73 +0.6 1,045,728 + CA264_04525 0.86 +1.8 1,045,756 + CA264_04525 0.90 -0.3 1,045,756 + CA264_04525 0.90 -0.4 1,045,757 - CA264_04525 0.90 +0.2 1,045,757 - CA264_04525 0.90 -0.0 1,045,757 - CA264_04525 0.90 +0.9 1,045,762 + +0.4 1,045,762 + -0.5 1,045,762 + -0.0 1,045,762 + -0.4 1,045,763 - +0.0 1,045,764 + +0.3 1,045,764 + +0.2 1,045,781 - +0.5 1,045,822 + -0.4 1,045,826 + +0.9 1,045,844 - -0.8 1,045,844 - -0.1 1,045,844 - +0.9 1,045,844 - -1.5 1,045,883 + +0.3 1,045,884 - -0.3 1,045,885 + +0.8 1,045,886 - +0.7 1,045,886 - +0.5 1,045,886 - -0.8 1,045,922 - +1.4 1,045,988 + +0.4 1,045,988 + +0.9 1,045,989 - -1.9 1,045,989 - -0.2 1,046,052 + +0.2 1,046,083 + -0.1 1,046,084 - -0.2 1,046,084 - -1.4 1,046,088 + +0.4 1,046,089 - +0.6 1,046,126 + -0.9 1,046,126 + +0.6 1,046,129 + -0.4 1,046,129 + -0.1 1,046,129 + -0.6 1,046,130 - +0.9 1,046,130 - -0.5 1,046,177 - +1.0 1,046,189 - +1.0 1,046,190 + -0.1 1,046,190 + +0.5 1,046,190 + +0.0 1,046,190 + +0.4 1,046,191 - -0.2 1,046,191 - -0.4 1,046,191 - +1.0 1,046,230 - -0.7 1,046,379 - -0.2 1,046,382 + -0.3 1,046,382 + +0.7 1,046,383 - +0.3 1,046,390 - -0.3 1,046,390 - +0.6 1,046,390 - -0.2 1,046,435 + -0.8 1,046,435 + -0.1 1,046,435 + +0.7 1,046,436 - +0.5 1,046,436 - -0.6 1,046,436 - -0.1 1,046,436 - -0.2 1,046,436 - -0.3 1,046,437 + -0.4 1,046,437 + -0.1 1,046,437 + -0.4 1,046,438 - -0.5 1,046,441 + -0.4 1,046,442 - +0.3 1,046,518 + -0.6 1,046,533 + -0.1 1,046,534 - +0.2 1,046,538 + +0.2 1,046,539 - -0.3 1,047,528 + -1.3 1,047,538 - +0.7 1,047,557 - -0.5 1,047,562 + -0.6 1,047,581 + -0.5 1,047,582 - +0.5 1,047,609 + +0.4 1,047,610 - +0.1 1,047,636 + -1.2 1,047,677 + +0.6 1,047,678 - -0.1 1,047,846 + CA264_04535 0.13 -0.3 1,047,864 + CA264_04535 0.14 +1.6 1,047,865 - CA264_04535 0.14 +0.2 1,047,865 - CA264_04535 0.14 -0.2 1,047,894 + CA264_04535 0.16 -0.4 1,047,895 - CA264_04535 0.16 +1.0 1,047,909 + CA264_04535 0.17 -0.7 1,047,909 + CA264_04535 0.17 +0.1 1,047,914 - CA264_04535 0.17 -0.0 1,048,030 - CA264_04535 0.23 -0.2 1,048,066 - CA264_04535 0.25 -0.6 1,048,081 + CA264_04535 0.26 -1.0 1,048,083 + CA264_04535 0.26 -0.3 1,048,084 - CA264_04535 0.26 +0.4 1,048,088 + CA264_04535 0.27 +1.2 1,048,088 + CA264_04535 0.27 -1.2 1,048,088 + CA264_04535 0.27 -0.7 1,048,088 + CA264_04535 0.27 +0.7 1,048,089 - CA264_04535 0.27 -0.1 1,048,135 + CA264_04535 0.29 -1.2 1,048,213 + CA264_04535 0.34 -0.4 1,048,215 + CA264_04535 0.34 +0.2 1,048,371 + CA264_04535 0.42 -0.2 1,048,444 + CA264_04535 0.46 -1.4 1,048,444 + CA264_04535 0.46 +0.0 1,048,445 - CA264_04535 0.47 +1.0 1,048,446 + CA264_04535 0.47 +0.9 1,048,459 - CA264_04535 0.47 +1.7 1,048,523 + CA264_04535 0.51 +0.9 1,048,524 - CA264_04535 0.51 +0.3
Or see this region's nucleotide sequence