Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04530

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04525 and CA264_04530 are separated by 699 nucleotidesCA264_04530 and CA264_04535 are separated by 87 nucleotides CA264_04525: CA264_04525 - DUF2279 domain-containing protein, at 1,045,004 to 1,045,843 _04525 CA264_04530: CA264_04530 - alpha-ketoacid dehydrogenase subunit beta, at 1,046,543 to 1,047,526 _04530 CA264_04535: CA264_04535 - hypothetical protein, at 1,047,614 to 1,049,398 _04535 Position (kb) 1046 1047 1048Strain fitness (log2 ratio) -2 -1 0 1 2at 1045.557 kb on - strand, within CA264_04525at 1045.557 kb on - strand, within CA264_04525at 1045.616 kb on + strand, within CA264_04525at 1045.616 kb on + strand, within CA264_04525at 1045.616 kb on + strand, within CA264_04525at 1045.617 kb on - strand, within CA264_04525at 1045.617 kb on - strand, within CA264_04525at 1045.619 kb on - strand, within CA264_04525at 1045.728 kb on + strand, within CA264_04525at 1045.756 kb on + strand, within CA264_04525at 1045.756 kb on + strand, within CA264_04525at 1045.757 kb on - strand, within CA264_04525at 1045.757 kb on - strand, within CA264_04525at 1045.757 kb on - strand, within CA264_04525at 1045.762 kb on + strandat 1045.762 kb on + strandat 1045.762 kb on + strandat 1045.762 kb on + strandat 1045.763 kb on - strandat 1045.764 kb on + strandat 1045.764 kb on + strandat 1045.781 kb on - strandat 1045.822 kb on + strandat 1045.826 kb on + strandat 1045.844 kb on - strandat 1045.844 kb on - strandat 1045.844 kb on - strandat 1045.844 kb on - strandat 1045.883 kb on + strandat 1045.884 kb on - strandat 1045.885 kb on + strandat 1045.886 kb on - strandat 1045.886 kb on - strandat 1045.886 kb on - strandat 1045.922 kb on - strandat 1045.988 kb on + strandat 1045.988 kb on + strandat 1045.989 kb on - strandat 1045.989 kb on - strandat 1046.052 kb on + strandat 1046.083 kb on + strandat 1046.084 kb on - strandat 1046.084 kb on - strandat 1046.088 kb on + strandat 1046.089 kb on - strandat 1046.126 kb on + strandat 1046.126 kb on + strandat 1046.129 kb on + strandat 1046.129 kb on + strandat 1046.129 kb on + strandat 1046.130 kb on - strandat 1046.130 kb on - strandat 1046.177 kb on - strandat 1046.189 kb on - strandat 1046.190 kb on + strandat 1046.190 kb on + strandat 1046.190 kb on + strandat 1046.190 kb on + strandat 1046.191 kb on - strandat 1046.191 kb on - strandat 1046.191 kb on - strandat 1046.230 kb on - strandat 1046.379 kb on - strandat 1046.382 kb on + strandat 1046.382 kb on + strandat 1046.383 kb on - strandat 1046.390 kb on - strandat 1046.390 kb on - strandat 1046.390 kb on - strandat 1046.435 kb on + strandat 1046.435 kb on + strandat 1046.435 kb on + strandat 1046.436 kb on - strandat 1046.436 kb on - strandat 1046.436 kb on - strandat 1046.436 kb on - strandat 1046.436 kb on - strandat 1046.437 kb on + strandat 1046.437 kb on + strandat 1046.437 kb on + strandat 1046.438 kb on - strandat 1046.441 kb on + strandat 1046.442 kb on - strandat 1046.518 kb on + strandat 1046.533 kb on + strandat 1046.534 kb on - strandat 1046.538 kb on + strandat 1046.539 kb on - strandat 1047.528 kb on + strandat 1047.538 kb on - strandat 1047.557 kb on - strandat 1047.562 kb on + strandat 1047.581 kb on + strandat 1047.582 kb on - strandat 1047.609 kb on + strandat 1047.610 kb on - strandat 1047.636 kb on + strandat 1047.677 kb on + strandat 1047.678 kb on - strandat 1047.846 kb on + strand, within CA264_04535at 1047.864 kb on + strand, within CA264_04535at 1047.865 kb on - strand, within CA264_04535at 1047.865 kb on - strand, within CA264_04535at 1047.894 kb on + strand, within CA264_04535at 1047.895 kb on - strand, within CA264_04535at 1047.909 kb on + strand, within CA264_04535at 1047.909 kb on + strand, within CA264_04535at 1047.914 kb on - strand, within CA264_04535at 1048.030 kb on - strand, within CA264_04535at 1048.066 kb on - strand, within CA264_04535at 1048.081 kb on + strand, within CA264_04535at 1048.083 kb on + strand, within CA264_04535at 1048.084 kb on - strand, within CA264_04535at 1048.088 kb on + strand, within CA264_04535at 1048.088 kb on + strand, within CA264_04535at 1048.088 kb on + strand, within CA264_04535at 1048.088 kb on + strand, within CA264_04535at 1048.089 kb on - strand, within CA264_04535at 1048.135 kb on + strand, within CA264_04535at 1048.213 kb on + strand, within CA264_04535at 1048.215 kb on + strand, within CA264_04535at 1048.371 kb on + strand, within CA264_04535at 1048.444 kb on + strand, within CA264_04535at 1048.444 kb on + strand, within CA264_04535at 1048.445 kb on - strand, within CA264_04535at 1048.446 kb on + strand, within CA264_04535at 1048.459 kb on - strand, within CA264_04535at 1048.523 kb on + strand, within CA264_04535at 1048.524 kb on - strand, within CA264_04535

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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1,045,557 - CA264_04525 0.66 +0.3
1,045,557 - CA264_04525 0.66 -0.1
1,045,616 + CA264_04525 0.73 -2.4
1,045,616 + CA264_04525 0.73 +1.6
1,045,616 + CA264_04525 0.73 -0.5
1,045,617 - CA264_04525 0.73 +0.1
1,045,617 - CA264_04525 0.73 -0.5
1,045,619 - CA264_04525 0.73 +0.6
1,045,728 + CA264_04525 0.86 +1.8
1,045,756 + CA264_04525 0.90 -0.3
1,045,756 + CA264_04525 0.90 -0.4
1,045,757 - CA264_04525 0.90 +0.2
1,045,757 - CA264_04525 0.90 -0.0
1,045,757 - CA264_04525 0.90 +0.9
1,045,762 + +0.4
1,045,762 + -0.5
1,045,762 + -0.0
1,045,762 + -0.4
1,045,763 - +0.0
1,045,764 + +0.3
1,045,764 + +0.2
1,045,781 - +0.5
1,045,822 + -0.4
1,045,826 + +0.9
1,045,844 - -0.8
1,045,844 - -0.1
1,045,844 - +0.9
1,045,844 - -1.5
1,045,883 + +0.3
1,045,884 - -0.3
1,045,885 + +0.8
1,045,886 - +0.7
1,045,886 - +0.5
1,045,886 - -0.8
1,045,922 - +1.4
1,045,988 + +0.4
1,045,988 + +0.9
1,045,989 - -1.9
1,045,989 - -0.2
1,046,052 + +0.2
1,046,083 + -0.1
1,046,084 - -0.2
1,046,084 - -1.4
1,046,088 + +0.4
1,046,089 - +0.6
1,046,126 + -0.9
1,046,126 + +0.6
1,046,129 + -0.4
1,046,129 + -0.1
1,046,129 + -0.6
1,046,130 - +0.9
1,046,130 - -0.5
1,046,177 - +1.0
1,046,189 - +1.0
1,046,190 + -0.1
1,046,190 + +0.5
1,046,190 + +0.0
1,046,190 + +0.4
1,046,191 - -0.2
1,046,191 - -0.4
1,046,191 - +1.0
1,046,230 - -0.7
1,046,379 - -0.2
1,046,382 + -0.3
1,046,382 + +0.7
1,046,383 - +0.3
1,046,390 - -0.3
1,046,390 - +0.6
1,046,390 - -0.2
1,046,435 + -0.8
1,046,435 + -0.1
1,046,435 + +0.7
1,046,436 - +0.5
1,046,436 - -0.6
1,046,436 - -0.1
1,046,436 - -0.2
1,046,436 - -0.3
1,046,437 + -0.4
1,046,437 + -0.1
1,046,437 + -0.4
1,046,438 - -0.5
1,046,441 + -0.4
1,046,442 - +0.3
1,046,518 + -0.6
1,046,533 + -0.1
1,046,534 - +0.2
1,046,538 + +0.2
1,046,539 - -0.3
1,047,528 + -1.3
1,047,538 - +0.7
1,047,557 - -0.5
1,047,562 + -0.6
1,047,581 + -0.5
1,047,582 - +0.5
1,047,609 + +0.4
1,047,610 - +0.1
1,047,636 + -1.2
1,047,677 + +0.6
1,047,678 - -0.1
1,047,846 + CA264_04535 0.13 -0.3
1,047,864 + CA264_04535 0.14 +1.6
1,047,865 - CA264_04535 0.14 +0.2
1,047,865 - CA264_04535 0.14 -0.2
1,047,894 + CA264_04535 0.16 -0.4
1,047,895 - CA264_04535 0.16 +1.0
1,047,909 + CA264_04535 0.17 -0.7
1,047,909 + CA264_04535 0.17 +0.1
1,047,914 - CA264_04535 0.17 -0.0
1,048,030 - CA264_04535 0.23 -0.2
1,048,066 - CA264_04535 0.25 -0.6
1,048,081 + CA264_04535 0.26 -1.0
1,048,083 + CA264_04535 0.26 -0.3
1,048,084 - CA264_04535 0.26 +0.4
1,048,088 + CA264_04535 0.27 +1.2
1,048,088 + CA264_04535 0.27 -1.2
1,048,088 + CA264_04535 0.27 -0.7
1,048,088 + CA264_04535 0.27 +0.7
1,048,089 - CA264_04535 0.27 -0.1
1,048,135 + CA264_04535 0.29 -1.2
1,048,213 + CA264_04535 0.34 -0.4
1,048,215 + CA264_04535 0.34 +0.2
1,048,371 + CA264_04535 0.42 -0.2
1,048,444 + CA264_04535 0.46 -1.4
1,048,444 + CA264_04535 0.46 +0.0
1,048,445 - CA264_04535 0.47 +1.0
1,048,446 + CA264_04535 0.47 +0.9
1,048,459 - CA264_04535 0.47 +1.7
1,048,523 + CA264_04535 0.51 +0.9
1,048,524 - CA264_04535 0.51 +0.3

Or see this region's nucleotide sequence