Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04280 and CA264_04285 are separated by 77 nucleotides CA264_04285 and CA264_04290 are separated by 202 nucleotides CA264_04290 and CA264_04295 overlap by 4 nucleotides
CA264_04280: CA264_04280 - hypothetical protein, at 988,711 to 989,112
_04280
CA264_04285: CA264_04285 - hypothetical protein, at 989,190 to 989,453
_04285
CA264_04290: CA264_04290 - ABC transporter permease, at 989,656 to 990,741
_04290
CA264_04295: CA264_04295 - hypothetical protein, at 990,738 to 992,126
_04295
Position (kb) 989
990
991 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 988.656 kb on + strand at 988.657 kb on - strand at 988.663 kb on - strand at 988.672 kb on - strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.674 kb on + strand at 988.681 kb on + strand at 988.681 kb on + strand at 988.682 kb on - strand at 988.683 kb on + strand at 988.683 kb on + strand at 988.684 kb on - strand at 988.684 kb on - strand at 988.684 kb on - strand at 988.686 kb on + strand at 988.687 kb on - strand at 988.693 kb on + strand at 988.706 kb on + strand at 988.707 kb on - strand at 988.707 kb on - strand at 988.711 kb on - strand at 988.842 kb on + strand, within CA264_04280 at 989.090 kb on - strand at 989.110 kb on + strand at 989.152 kb on + strand at 989.161 kb on - strand at 989.172 kb on + strand at 989.172 kb on + strand at 989.182 kb on - strand at 989.191 kb on + strand at 989.191 kb on + strand at 989.191 kb on + strand at 989.192 kb on - strand at 989.211 kb on + strand at 989.212 kb on - strand at 989.213 kb on + strand at 989.213 kb on + strand at 989.213 kb on + strand at 989.217 kb on + strand at 989.227 kb on + strand, within CA264_04285 at 989.336 kb on - strand, within CA264_04285 at 989.371 kb on - strand, within CA264_04285 at 989.388 kb on + strand, within CA264_04285 at 989.447 kb on + strand at 989.447 kb on + strand at 989.479 kb on + strand at 989.493 kb on + strand at 989.495 kb on + strand at 989.612 kb on + strand at 989.612 kb on + strand at 989.612 kb on + strand at 989.612 kb on + strand at 989.654 kb on + strand at 989.707 kb on - strand at 989.707 kb on - strand at 989.707 kb on - strand at 989.809 kb on - strand, within CA264_04290 at 989.821 kb on - strand, within CA264_04290 at 989.835 kb on + strand, within CA264_04290 at 989.886 kb on + strand, within CA264_04290 at 989.886 kb on + strand, within CA264_04290 at 990.127 kb on - strand, within CA264_04290 at 990.283 kb on + strand, within CA264_04290 at 990.308 kb on + strand, within CA264_04290 at 990.309 kb on - strand, within CA264_04290 at 990.320 kb on + strand, within CA264_04290 at 990.329 kb on + strand, within CA264_04290 at 990.330 kb on - strand, within CA264_04290 at 990.405 kb on - strand, within CA264_04290 at 990.439 kb on + strand, within CA264_04290 at 990.439 kb on + strand, within CA264_04290 at 990.730 kb on + strand at 990.757 kb on - strand at 990.757 kb on - strand at 990.779 kb on - strand at 990.814 kb on - strand at 990.814 kb on - strand at 990.829 kb on - strand at 990.968 kb on + strand, within CA264_04295 at 990.968 kb on + strand, within CA264_04295 at 991.053 kb on - strand, within CA264_04295 at 991.055 kb on - strand, within CA264_04295 at 991.055 kb on - strand, within CA264_04295 at 991.065 kb on + strand, within CA264_04295 at 991.105 kb on + strand, within CA264_04295 at 991.106 kb on - strand, within CA264_04295 at 991.106 kb on - strand, within CA264_04295 at 991.110 kb on + strand, within CA264_04295 at 991.111 kb on - strand, within CA264_04295 at 991.111 kb on - strand, within CA264_04295 at 991.111 kb on - strand, within CA264_04295 at 991.131 kb on - strand, within CA264_04295 at 991.133 kb on + strand, within CA264_04295 at 991.134 kb on - strand, within CA264_04295 at 991.134 kb on - strand, within CA264_04295 at 991.204 kb on + strand, within CA264_04295 at 991.362 kb on + strand, within CA264_04295 at 991.363 kb on - strand, within CA264_04295 at 991.367 kb on + strand, within CA264_04295 at 991.523 kb on - strand, within CA264_04295 at 991.570 kb on + strand, within CA264_04295 at 991.591 kb on - strand, within CA264_04295 at 991.591 kb on - strand, within CA264_04295 at 991.638 kb on - strand, within CA264_04295 at 991.667 kb on + strand, within CA264_04295 at 991.703 kb on - strand, within CA264_04295 at 991.710 kb on + strand, within CA264_04295
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 988,656 + -0.9 988,657 - -1.4 988,663 - +0.0 988,672 - -0.1 988,674 + -0.6 988,674 + +1.2 988,674 + -0.7 988,674 + -0.0 988,681 + -0.8 988,681 + -1.6 988,682 - -1.1 988,683 + -0.5 988,683 + -0.5 988,684 - -0.1 988,684 - -0.3 988,684 - +0.3 988,686 + -0.5 988,687 - -0.0 988,693 + +0.4 988,706 + -0.3 988,707 - +0.4 988,707 - -0.8 988,711 - -0.1 988,842 + CA264_04280 0.33 -0.3 989,090 - +0.8 989,110 + +0.5 989,152 + +0.3 989,161 - -0.6 989,172 + -0.8 989,172 + -1.3 989,182 - +1.0 989,191 + -0.3 989,191 + -1.4 989,191 + -0.4 989,192 - +0.8 989,211 + -1.0 989,212 - -1.0 989,213 + +1.4 989,213 + +1.3 989,213 + +0.2 989,217 + +0.9 989,227 + CA264_04285 0.14 -0.6 989,336 - CA264_04285 0.55 +0.5 989,371 - CA264_04285 0.69 +0.0 989,388 + CA264_04285 0.75 +0.2 989,447 + -0.5 989,447 + -0.1 989,479 + -0.7 989,493 + -1.1 989,495 + -0.1 989,612 + +0.3 989,612 + +0.2 989,612 + -0.1 989,612 + -0.4 989,654 + -0.3 989,707 - -1.5 989,707 - -1.7 989,707 - -0.9 989,809 - CA264_04290 0.14 -0.9 989,821 - CA264_04290 0.15 -0.6 989,835 + CA264_04290 0.16 -0.4 989,886 + CA264_04290 0.21 -0.4 989,886 + CA264_04290 0.21 -1.3 990,127 - CA264_04290 0.43 -0.5 990,283 + CA264_04290 0.58 -0.3 990,308 + CA264_04290 0.60 -1.0 990,309 - CA264_04290 0.60 +0.2 990,320 + CA264_04290 0.61 -1.8 990,329 + CA264_04290 0.62 -1.8 990,330 - CA264_04290 0.62 -1.6 990,405 - CA264_04290 0.69 -1.0 990,439 + CA264_04290 0.72 -1.2 990,439 + CA264_04290 0.72 -0.3 990,730 + -0.4 990,757 - -0.5 990,757 - +1.0 990,779 - -1.1 990,814 - -0.7 990,814 - -1.3 990,829 - -0.5 990,968 + CA264_04295 0.17 -1.6 990,968 + CA264_04295 0.17 -0.6 991,053 - CA264_04295 0.23 -0.4 991,055 - CA264_04295 0.23 -1.6 991,055 - CA264_04295 0.23 -0.5 991,065 + CA264_04295 0.24 +1.2 991,105 + CA264_04295 0.26 -1.0 991,106 - CA264_04295 0.26 -0.6 991,106 - CA264_04295 0.26 -1.6 991,110 + CA264_04295 0.27 -1.7 991,111 - CA264_04295 0.27 -1.7 991,111 - CA264_04295 0.27 -2.2 991,111 - CA264_04295 0.27 -1.8 991,131 - CA264_04295 0.28 -1.8 991,133 + CA264_04295 0.28 +0.2 991,134 - CA264_04295 0.29 -0.9 991,134 - CA264_04295 0.29 -1.0 991,204 + CA264_04295 0.34 -1.0 991,362 + CA264_04295 0.45 -1.1 991,363 - CA264_04295 0.45 -0.9 991,367 + CA264_04295 0.45 -1.5 991,523 - CA264_04295 0.57 -1.9 991,570 + CA264_04295 0.60 -3.3 991,591 - CA264_04295 0.61 -1.1 991,591 - CA264_04295 0.61 -1.5 991,638 - CA264_04295 0.65 -1.7 991,667 + CA264_04295 0.67 -1.8 991,703 - CA264_04295 0.69 +1.1 991,710 + CA264_04295 0.70 -2.0
Or see this region's nucleotide sequence