Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03170 and CA264_03175 are separated by 189 nucleotides CA264_03175 and CA264_03180 are separated by 37 nucleotides
CA264_03170: CA264_03170 - hypothetical protein, at 740,880 to 741,110
_03170
CA264_03175: CA264_03175 - acriflavin resistance protein, at 741,300 to 744,485
_03175
CA264_03180: CA264_03180 - efflux transporter periplasmic adaptor subunit, at 744,523 to 745,575
_03180
Position (kb) 741
742
743
744
745 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 740.335 kb on + strand at 740.342 kb on + strand at 740.343 kb on - strand at 740.423 kb on + strand at 740.424 kb on - strand at 740.456 kb on - strand at 740.518 kb on + strand at 740.518 kb on + strand at 740.519 kb on - strand at 740.519 kb on - strand at 740.520 kb on + strand at 740.523 kb on + strand at 740.535 kb on - strand at 740.541 kb on + strand at 740.698 kb on - strand at 740.710 kb on - strand at 740.898 kb on - strand at 740.939 kb on - strand, within CA264_03170 at 740.971 kb on + strand, within CA264_03170 at 741.066 kb on + strand, within CA264_03170 at 741.119 kb on + strand at 741.119 kb on + strand at 741.120 kb on - strand at 741.120 kb on - strand at 741.122 kb on + strand at 741.122 kb on + strand at 741.122 kb on + strand at 741.129 kb on + strand at 741.129 kb on + strand at 741.130 kb on - strand at 741.131 kb on + strand at 741.134 kb on + strand at 741.134 kb on + strand at 741.135 kb on - strand at 741.135 kb on - strand at 741.154 kb on - strand at 741.154 kb on - strand at 741.161 kb on + strand at 741.172 kb on + strand at 741.172 kb on + strand at 741.190 kb on + strand at 741.225 kb on - strand at 741.270 kb on + strand at 741.274 kb on + strand at 741.301 kb on + strand at 741.302 kb on - strand at 741.302 kb on - strand at 741.304 kb on + strand at 741.304 kb on + strand at 741.304 kb on + strand at 741.358 kb on - strand at 741.358 kb on - strand at 741.358 kb on - strand at 741.368 kb on + strand at 741.387 kb on + strand at 741.387 kb on + strand at 741.440 kb on - strand at 741.442 kb on + strand at 741.442 kb on + strand at 741.609 kb on + strand at 741.616 kb on - strand at 741.671 kb on + strand, within CA264_03175 at 741.679 kb on - strand, within CA264_03175 at 741.725 kb on + strand, within CA264_03175 at 741.725 kb on + strand, within CA264_03175 at 741.733 kb on - strand, within CA264_03175 at 741.733 kb on - strand, within CA264_03175 at 741.826 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.833 kb on + strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.836 kb on + strand, within CA264_03175 at 741.837 kb on - strand, within CA264_03175 at 741.837 kb on - strand, within CA264_03175 at 741.842 kb on - strand, within CA264_03175 at 741.903 kb on - strand, within CA264_03175 at 741.940 kb on + strand, within CA264_03175 at 741.940 kb on + strand, within CA264_03175 at 741.948 kb on - strand, within CA264_03175 at 741.975 kb on - strand, within CA264_03175 at 742.037 kb on + strand, within CA264_03175 at 742.076 kb on + strand, within CA264_03175 at 742.076 kb on + strand, within CA264_03175 at 742.077 kb on - strand, within CA264_03175 at 742.077 kb on - strand, within CA264_03175 at 742.122 kb on + strand, within CA264_03175 at 742.139 kb on + strand, within CA264_03175 at 742.139 kb on + strand, within CA264_03175 at 742.157 kb on + strand, within CA264_03175 at 742.213 kb on + strand, within CA264_03175 at 742.213 kb on + strand, within CA264_03175 at 742.214 kb on - strand, within CA264_03175 at 742.271 kb on + strand, within CA264_03175 at 742.350 kb on - strand, within CA264_03175 at 742.389 kb on + strand, within CA264_03175 at 742.411 kb on - strand, within CA264_03175 at 742.411 kb on - strand, within CA264_03175 at 742.411 kb on - strand, within CA264_03175 at 742.492 kb on - strand, within CA264_03175 at 742.496 kb on + strand, within CA264_03175 at 742.496 kb on + strand, within CA264_03175 at 742.497 kb on - strand, within CA264_03175 at 742.500 kb on + strand, within CA264_03175 at 742.500 kb on + strand, within CA264_03175 at 742.521 kb on - strand, within CA264_03175 at 742.521 kb on - strand, within CA264_03175 at 742.575 kb on - strand, within CA264_03175 at 742.577 kb on + strand, within CA264_03175 at 742.603 kb on - strand, within CA264_03175 at 742.603 kb on - strand, within CA264_03175 at 742.630 kb on + strand, within CA264_03175 at 742.630 kb on + strand, within CA264_03175 at 742.631 kb on - strand, within CA264_03175 at 742.667 kb on + strand, within CA264_03175 at 742.671 kb on + strand, within CA264_03175 at 742.672 kb on - strand, within CA264_03175 at 742.672 kb on - strand, within CA264_03175 at 742.692 kb on + strand, within CA264_03175 at 742.692 kb on + strand, within CA264_03175 at 742.723 kb on - strand, within CA264_03175 at 742.752 kb on + strand, within CA264_03175 at 742.767 kb on - strand, within CA264_03175 at 742.782 kb on + strand, within CA264_03175 at 742.783 kb on - strand, within CA264_03175 at 742.852 kb on - strand, within CA264_03175 at 742.971 kb on + strand, within CA264_03175 at 742.972 kb on - strand, within CA264_03175 at 743.049 kb on - strand, within CA264_03175 at 743.061 kb on + strand, within CA264_03175 at 743.075 kb on + strand, within CA264_03175 at 743.076 kb on - strand, within CA264_03175 at 743.081 kb on + strand, within CA264_03175 at 743.081 kb on + strand, within CA264_03175 at 743.081 kb on + strand, within CA264_03175 at 743.082 kb on - strand, within CA264_03175 at 743.082 kb on - strand, within CA264_03175 at 743.085 kb on + strand, within CA264_03175 at 743.086 kb on - strand, within CA264_03175 at 743.129 kb on + strand, within CA264_03175 at 743.163 kb on + strand, within CA264_03175 at 743.213 kb on - strand, within CA264_03175 at 743.255 kb on - strand, within CA264_03175 at 743.294 kb on + strand, within CA264_03175 at 743.295 kb on - strand, within CA264_03175 at 743.369 kb on + strand, within CA264_03175 at 743.502 kb on + strand, within CA264_03175 at 743.502 kb on + strand, within CA264_03175 at 743.502 kb on + strand, within CA264_03175 at 743.557 kb on + strand, within CA264_03175 at 743.557 kb on + strand, within CA264_03175 at 743.557 kb on + strand, within CA264_03175 at 743.557 kb on + strand, within CA264_03175 at 743.676 kb on + strand, within CA264_03175 at 743.704 kb on - strand, within CA264_03175 at 743.704 kb on - strand, within CA264_03175 at 743.788 kb on + strand, within CA264_03175 at 743.788 kb on + strand, within CA264_03175 at 743.793 kb on - strand, within CA264_03175 at 743.793 kb on - strand, within CA264_03175 at 743.832 kb on + strand, within CA264_03175 at 743.832 kb on + strand, within CA264_03175 at 743.838 kb on - strand, within CA264_03175 at 743.869 kb on - strand, within CA264_03175 at 743.902 kb on + strand, within CA264_03175 at 744.006 kb on + strand, within CA264_03175 at 744.080 kb on + strand, within CA264_03175 at 744.083 kb on - strand, within CA264_03175 at 744.098 kb on + strand, within CA264_03175 at 744.142 kb on - strand, within CA264_03175 at 744.142 kb on - strand, within CA264_03175 at 744.142 kb on - strand, within CA264_03175 at 744.155 kb on + strand, within CA264_03175 at 744.156 kb on - strand, within CA264_03175 at 744.352 kb on - strand at 744.385 kb on + strand at 744.385 kb on + strand at 744.386 kb on - strand at 744.386 kb on - strand at 744.422 kb on + strand at 744.423 kb on - strand at 744.427 kb on - strand at 744.445 kb on - strand at 744.488 kb on - strand at 744.503 kb on - strand at 744.516 kb on + strand at 744.517 kb on - strand at 744.683 kb on - strand, within CA264_03180 at 744.773 kb on + strand, within CA264_03180 at 744.774 kb on - strand, within CA264_03180 at 745.026 kb on - strand, within CA264_03180 at 745.264 kb on + strand, within CA264_03180 at 745.264 kb on + strand, within CA264_03180 at 745.303 kb on + strand, within CA264_03180 at 745.382 kb on - strand, within CA264_03180 at 745.383 kb on + strand, within CA264_03180 at 745.383 kb on + strand, within CA264_03180 at 745.384 kb on - strand, within CA264_03180 at 745.389 kb on + strand, within CA264_03180 at 745.389 kb on + strand, within CA264_03180 at 745.402 kb on - strand, within CA264_03180 at 745.428 kb on + strand, within CA264_03180 at 745.428 kb on + strand, within CA264_03180
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 740,335 + -0.4 740,342 + +0.5 740,343 - +0.1 740,423 + -0.8 740,424 - -1.8 740,456 - +1.5 740,518 + -1.6 740,518 + +0.6 740,519 - -0.5 740,519 - -0.1 740,520 + +0.0 740,523 + -0.2 740,535 - -0.7 740,541 + +0.3 740,698 - -0.4 740,710 - +0.3 740,898 - -0.4 740,939 - CA264_03170 0.26 +0.8 740,971 + CA264_03170 0.39 -1.4 741,066 + CA264_03170 0.81 +0.5 741,119 + -0.5 741,119 + +0.2 741,120 - -1.0 741,120 - -1.0 741,122 + -0.1 741,122 + -1.2 741,122 + -0.0 741,129 + -0.6 741,129 + +1.1 741,130 - -0.5 741,131 + -0.1 741,134 + -0.7 741,134 + -0.1 741,135 - -0.2 741,135 - -0.4 741,154 - -0.6 741,154 - -0.4 741,161 + -0.1 741,172 + -1.2 741,172 + +1.6 741,190 + -0.7 741,225 - +0.8 741,270 + -0.8 741,274 + -1.0 741,301 + +0.8 741,302 - -0.7 741,302 - -1.2 741,304 + -0.6 741,304 + -0.2 741,304 + +0.3 741,358 - -0.6 741,358 - -1.6 741,358 - -2.8 741,368 + +2.2 741,387 + +0.6 741,387 + -0.2 741,440 - +0.2 741,442 + -0.5 741,442 + -0.9 741,609 + +0.6 741,616 - -0.7 741,671 + CA264_03175 0.12 -0.5 741,679 - CA264_03175 0.12 -1.1 741,725 + CA264_03175 0.13 -0.9 741,725 + CA264_03175 0.13 -0.4 741,733 - CA264_03175 0.14 +0.2 741,733 - CA264_03175 0.14 -1.3 741,826 + CA264_03175 0.17 -0.2 741,832 + CA264_03175 0.17 -0.2 741,832 + CA264_03175 0.17 +0.1 741,832 + CA264_03175 0.17 -1.0 741,832 + CA264_03175 0.17 -0.9 741,832 + CA264_03175 0.17 -0.3 741,832 + CA264_03175 0.17 +1.0 741,832 + CA264_03175 0.17 +1.2 741,833 + CA264_03175 0.17 -2.9 741,833 - CA264_03175 0.17 -2.2 741,833 - CA264_03175 0.17 -0.4 741,833 - CA264_03175 0.17 -0.2 741,833 - CA264_03175 0.17 -0.5 741,833 - CA264_03175 0.17 -2.0 741,836 + CA264_03175 0.17 -0.2 741,837 - CA264_03175 0.17 -1.1 741,837 - CA264_03175 0.17 -0.7 741,842 - CA264_03175 0.17 -0.6 741,903 - CA264_03175 0.19 +0.4 741,940 + CA264_03175 0.20 +0.3 741,940 + CA264_03175 0.20 -1.0 741,948 - CA264_03175 0.20 -1.0 741,975 - CA264_03175 0.21 -1.3 742,037 + CA264_03175 0.23 +0.2 742,076 + CA264_03175 0.24 -0.0 742,076 + CA264_03175 0.24 -0.2 742,077 - CA264_03175 0.24 -1.4 742,077 - CA264_03175 0.24 -1.2 742,122 + CA264_03175 0.26 -0.6 742,139 + CA264_03175 0.26 +1.2 742,139 + CA264_03175 0.26 +0.8 742,157 + CA264_03175 0.27 -0.4 742,213 + CA264_03175 0.29 +0.2 742,213 + CA264_03175 0.29 +0.4 742,214 - CA264_03175 0.29 -1.5 742,271 + CA264_03175 0.30 -0.3 742,350 - CA264_03175 0.33 -0.9 742,389 + CA264_03175 0.34 +0.1 742,411 - CA264_03175 0.35 -1.4 742,411 - CA264_03175 0.35 +0.2 742,411 - CA264_03175 0.35 +0.9 742,492 - CA264_03175 0.37 -1.2 742,496 + CA264_03175 0.38 +0.4 742,496 + CA264_03175 0.38 -0.7 742,497 - CA264_03175 0.38 -1.8 742,500 + CA264_03175 0.38 +0.3 742,500 + CA264_03175 0.38 -1.4 742,521 - CA264_03175 0.38 -0.7 742,521 - CA264_03175 0.38 +0.0 742,575 - CA264_03175 0.40 -0.4 742,577 + CA264_03175 0.40 -0.6 742,603 - CA264_03175 0.41 -0.6 742,603 - CA264_03175 0.41 -0.4 742,630 + CA264_03175 0.42 -0.0 742,630 + CA264_03175 0.42 +0.5 742,631 - CA264_03175 0.42 -0.2 742,667 + CA264_03175 0.43 +1.5 742,671 + CA264_03175 0.43 -0.8 742,672 - CA264_03175 0.43 -0.9 742,672 - CA264_03175 0.43 -0.8 742,692 + CA264_03175 0.44 -2.0 742,692 + CA264_03175 0.44 -0.4 742,723 - CA264_03175 0.45 +0.9 742,752 + CA264_03175 0.46 -1.0 742,767 - CA264_03175 0.46 -0.1 742,782 + CA264_03175 0.47 +0.1 742,783 - CA264_03175 0.47 +0.2 742,852 - CA264_03175 0.49 -2.8 742,971 + CA264_03175 0.52 -0.4 742,972 - CA264_03175 0.52 +2.2 743,049 - CA264_03175 0.55 -0.8 743,061 + CA264_03175 0.55 +0.1 743,075 + CA264_03175 0.56 -0.5 743,076 - CA264_03175 0.56 +0.0 743,081 + CA264_03175 0.56 -0.2 743,081 + CA264_03175 0.56 -1.0 743,081 + CA264_03175 0.56 +0.2 743,082 - CA264_03175 0.56 -0.1 743,082 - CA264_03175 0.56 -0.0 743,085 + CA264_03175 0.56 -0.7 743,086 - CA264_03175 0.56 -0.7 743,129 + CA264_03175 0.57 -0.3 743,163 + CA264_03175 0.58 -0.1 743,213 - CA264_03175 0.60 +0.1 743,255 - CA264_03175 0.61 -0.3 743,294 + CA264_03175 0.63 -0.2 743,295 - CA264_03175 0.63 -0.6 743,369 + CA264_03175 0.65 -0.8 743,502 + CA264_03175 0.69 -0.4 743,502 + CA264_03175 0.69 -1.0 743,502 + CA264_03175 0.69 -0.4 743,557 + CA264_03175 0.71 +0.2 743,557 + CA264_03175 0.71 +0.6 743,557 + CA264_03175 0.71 -2.1 743,557 + CA264_03175 0.71 +1.0 743,676 + CA264_03175 0.75 -0.3 743,704 - CA264_03175 0.75 +0.0 743,704 - CA264_03175 0.75 -0.0 743,788 + CA264_03175 0.78 -0.4 743,788 + CA264_03175 0.78 -0.6 743,793 - CA264_03175 0.78 -0.6 743,793 - CA264_03175 0.78 -0.6 743,832 + CA264_03175 0.79 +0.6 743,832 + CA264_03175 0.79 -0.5 743,838 - CA264_03175 0.80 +0.3 743,869 - CA264_03175 0.81 -0.9 743,902 + CA264_03175 0.82 +1.0 744,006 + CA264_03175 0.85 -0.9 744,080 + CA264_03175 0.87 -1.1 744,083 - CA264_03175 0.87 +0.7 744,098 + CA264_03175 0.88 -1.1 744,142 - CA264_03175 0.89 +0.4 744,142 - CA264_03175 0.89 -0.0 744,142 - CA264_03175 0.89 -1.1 744,155 + CA264_03175 0.90 +0.5 744,156 - CA264_03175 0.90 -1.1 744,352 - -0.6 744,385 + -1.0 744,385 + -0.3 744,386 - -0.8 744,386 - -1.3 744,422 + +2.2 744,423 - +0.0 744,427 - +0.3 744,445 - -0.6 744,488 - -1.0 744,503 - -0.7 744,516 + -0.7 744,517 - -1.9 744,683 - CA264_03180 0.15 -1.5 744,773 + CA264_03180 0.24 -0.2 744,774 - CA264_03180 0.24 -1.1 745,026 - CA264_03180 0.48 -1.8 745,264 + CA264_03180 0.70 -1.7 745,264 + CA264_03180 0.70 -0.4 745,303 + CA264_03180 0.74 -1.1 745,382 - CA264_03180 0.82 +0.4 745,383 + CA264_03180 0.82 +0.5 745,383 + CA264_03180 0.82 +0.5 745,384 - CA264_03180 0.82 -1.3 745,389 + CA264_03180 0.82 -1.3 745,389 + CA264_03180 0.82 -0.0 745,402 - CA264_03180 0.83 -0.3 745,428 + CA264_03180 0.86 +0.3 745,428 + CA264_03180 0.86 +0.3
Or see this region's nucleotide sequence