Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01635 and CA264_01640 are separated by 253 nucleotides CA264_01640 and CA264_01645 are separated by 354 nucleotides CA264_01645 and CA264_01650 are separated by 168 nucleotides
CA264_01635: CA264_01635 - nicotinamidase, at 384,893 to 385,504
_01635
CA264_01640: CA264_01640 - DEAD/DEAH box helicase, at 385,758 to 387,176
_01640
CA264_01645: CA264_01645 - hypothetical protein, at 387,531 to 387,713
_01645
CA264_01650: CA264_01650 - YebC/PmpR family DNA-binding transcriptional regulator, at 387,882 to 388,637
_01650
Position (kb) 385
386
387
388 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 384.784 kb on + strand at 384.796 kb on + strand at 384.815 kb on - strand at 384.872 kb on - strand at 384.872 kb on - strand at 384.873 kb on + strand at 384.873 kb on + strand at 384.874 kb on - strand at 384.907 kb on + strand at 384.942 kb on - strand at 385.000 kb on + strand, within CA264_01635 at 385.000 kb on + strand, within CA264_01635 at 385.000 kb on + strand, within CA264_01635 at 385.006 kb on - strand, within CA264_01635 at 385.006 kb on - strand, within CA264_01635 at 385.056 kb on + strand, within CA264_01635 at 385.099 kb on + strand, within CA264_01635 at 385.100 kb on - strand, within CA264_01635 at 385.161 kb on + strand, within CA264_01635 at 385.161 kb on + strand, within CA264_01635 at 385.162 kb on - strand, within CA264_01635 at 385.170 kb on - strand, within CA264_01635 at 385.301 kb on + strand, within CA264_01635 at 385.302 kb on - strand, within CA264_01635 at 385.478 kb on + strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.479 kb on - strand at 385.484 kb on + strand at 385.487 kb on + strand at 385.493 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.504 kb on + strand at 385.505 kb on - strand at 385.505 kb on - strand at 385.505 kb on - strand at 385.508 kb on - strand at 385.508 kb on - strand at 385.514 kb on + strand at 385.517 kb on + strand at 385.517 kb on + strand at 385.518 kb on - strand at 385.518 kb on - strand at 385.518 kb on - strand at 385.524 kb on - strand at 385.543 kb on + strand at 385.543 kb on + strand at 385.543 kb on + strand at 385.545 kb on + strand at 385.545 kb on + strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.546 kb on - strand at 385.547 kb on + strand at 385.548 kb on - strand at 385.692 kb on + strand at 385.692 kb on + strand at 385.693 kb on - strand at 385.760 kb on - strand at 385.814 kb on + strand at 385.814 kb on + strand at 386.201 kb on + strand, within CA264_01640 at 386.255 kb on - strand, within CA264_01640 at 386.255 kb on - strand, within CA264_01640 at 386.486 kb on + strand, within CA264_01640 at 386.486 kb on + strand, within CA264_01640 at 386.487 kb on - strand, within CA264_01640 at 386.487 kb on - strand, within CA264_01640 at 386.558 kb on - strand, within CA264_01640 at 386.558 kb on - strand, within CA264_01640 at 386.558 kb on - strand, within CA264_01640 at 386.580 kb on + strand, within CA264_01640 at 386.582 kb on + strand, within CA264_01640 at 386.583 kb on - strand, within CA264_01640 at 386.802 kb on + strand, within CA264_01640 at 386.806 kb on + strand, within CA264_01640 at 386.806 kb on + strand, within CA264_01640 at 386.850 kb on - strand, within CA264_01640 at 386.853 kb on - strand, within CA264_01640 at 386.973 kb on + strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 386.974 kb on - strand, within CA264_01640 at 387.029 kb on - strand, within CA264_01640 at 387.053 kb on + strand at 387.054 kb on - strand at 387.169 kb on + strand at 387.254 kb on - strand at 387.295 kb on - strand at 387.300 kb on + strand at 387.301 kb on - strand at 387.304 kb on - strand at 387.306 kb on - strand at 387.306 kb on - strand at 387.310 kb on - strand at 387.354 kb on + strand at 387.383 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.471 kb on + strand at 387.472 kb on - strand at 387.472 kb on - strand at 387.472 kb on - strand at 387.503 kb on + strand at 387.504 kb on - strand at 387.530 kb on - strand at 387.579 kb on - strand, within CA264_01645 at 387.633 kb on + strand, within CA264_01645 at 387.683 kb on + strand, within CA264_01645 at 387.690 kb on + strand, within CA264_01645 at 387.741 kb on + strand at 387.882 kb on - strand at 387.953 kb on - strand at 388.040 kb on - strand, within CA264_01650 at 388.040 kb on - strand, within CA264_01650 at 388.040 kb on - strand, within CA264_01650 at 388.138 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650 at 388.171 kb on - strand, within CA264_01650
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 384,784 + +0.7 384,796 + -0.6 384,815 - +0.0 384,872 - -0.5 384,872 - +0.9 384,873 + +0.2 384,873 + +0.2 384,874 - -0.3 384,907 + -1.1 384,942 - +0.0 385,000 + CA264_01635 0.17 -0.6 385,000 + CA264_01635 0.17 -0.1 385,000 + CA264_01635 0.17 +2.2 385,006 - CA264_01635 0.18 +0.1 385,006 - CA264_01635 0.18 -0.5 385,056 + CA264_01635 0.27 +0.9 385,099 + CA264_01635 0.34 -0.4 385,100 - CA264_01635 0.34 -0.1 385,161 + CA264_01635 0.44 -0.3 385,161 + CA264_01635 0.44 +0.2 385,162 - CA264_01635 0.44 -0.1 385,170 - CA264_01635 0.45 -0.6 385,301 + CA264_01635 0.67 +0.1 385,302 - CA264_01635 0.67 -0.2 385,478 + -0.3 385,479 - +0.9 385,479 - -0.1 385,479 - +0.2 385,479 - -0.2 385,479 - +0.8 385,479 - +0.0 385,484 + +0.7 385,487 + +0.1 385,493 + +0.1 385,504 + -1.7 385,504 + -0.9 385,504 + -0.0 385,504 + -0.3 385,505 - -0.1 385,505 - -0.1 385,505 - +0.4 385,508 - +0.0 385,508 - -0.1 385,514 + -0.4 385,517 + -1.3 385,517 + +0.1 385,518 - +0.8 385,518 - -0.4 385,518 - +0.6 385,524 - +0.9 385,543 + -1.2 385,543 + +0.4 385,543 + +0.5 385,545 + -0.7 385,545 + -0.6 385,546 - +0.8 385,546 - -0.6 385,546 - -0.2 385,546 - +0.0 385,546 - +0.7 385,547 + -0.6 385,548 - +0.9 385,692 + +1.0 385,692 + -0.7 385,693 - -1.0 385,760 - +0.7 385,814 + +0.9 385,814 + +0.7 386,201 + CA264_01640 0.31 +1.2 386,255 - CA264_01640 0.35 +0.6 386,255 - CA264_01640 0.35 +1.4 386,486 + CA264_01640 0.51 +0.6 386,486 + CA264_01640 0.51 +1.1 386,487 - CA264_01640 0.51 +0.7 386,487 - CA264_01640 0.51 +0.7 386,558 - CA264_01640 0.56 +0.4 386,558 - CA264_01640 0.56 +0.8 386,558 - CA264_01640 0.56 +1.1 386,580 + CA264_01640 0.58 -1.1 386,582 + CA264_01640 0.58 +1.1 386,583 - CA264_01640 0.58 +0.4 386,802 + CA264_01640 0.74 +0.7 386,806 + CA264_01640 0.74 +0.9 386,806 + CA264_01640 0.74 +0.7 386,850 - CA264_01640 0.77 +1.7 386,853 - CA264_01640 0.77 +1.3 386,973 + CA264_01640 0.86 -0.2 386,974 - CA264_01640 0.86 +0.9 386,974 - CA264_01640 0.86 +0.8 386,974 - CA264_01640 0.86 +1.2 387,029 - CA264_01640 0.90 +1.0 387,053 + +1.0 387,054 - +0.3 387,169 + +1.2 387,254 - -0.4 387,295 - -3.0 387,300 + -1.7 387,301 - -1.8 387,304 - -1.5 387,306 - -1.2 387,306 - -1.0 387,310 - -1.0 387,354 + -0.9 387,383 + +0.2 387,471 + -0.6 387,471 + -0.7 387,471 + -0.3 387,471 + -0.7 387,472 - -0.3 387,472 - -0.6 387,472 - +0.9 387,503 + -1.2 387,504 - -1.9 387,530 - +0.2 387,579 - CA264_01645 0.26 -1.0 387,633 + CA264_01645 0.56 +1.1 387,683 + CA264_01645 0.83 -0.2 387,690 + CA264_01645 0.87 -1.6 387,741 + -0.8 387,882 - -1.8 387,953 - -0.2 388,040 - CA264_01650 0.21 -0.2 388,040 - CA264_01650 0.21 -0.9 388,040 - CA264_01650 0.21 -1.5 388,138 - CA264_01650 0.34 -1.3 388,171 - CA264_01650 0.38 -0.5 388,171 - CA264_01650 0.38 +0.9 388,171 - CA264_01650 0.38 -0.7
Or see this region's nucleotide sequence