Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01060 and CA264_01065 are separated by 153 nucleotides CA264_01065 and CA264_01070 are separated by 39 nucleotides CA264_01070 and CA264_01075 are separated by 95 nucleotides CA264_01075 and CA264_01080 are separated by 120 nucleotides
CA264_01060: CA264_01060 - hypothetical protein, at 233,710 to 234,744
_01060
CA264_01065: CA264_01065 - MarR family transcriptional regulator, at 234,898 to 235,347
_01065
CA264_01070: CA264_01070 - lipid-binding protein, at 235,387 to 236,046
_01070
CA264_01075: CA264_01075 - lipid-binding protein, at 236,142 to 236,807
_01075
CA264_01080: CA264_01080 - hypothetical protein, at 236,928 to 237,689
_01080
Position (kb) 235
236
237 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 234.513 kb on + strand, within CA264_01060 at 234.514 kb on - strand, within CA264_01060 at 234.514 kb on - strand, within CA264_01060 at 234.539 kb on + strand, within CA264_01060 at 234.549 kb on - strand, within CA264_01060 at 234.733 kb on + strand at 234.743 kb on - strand at 234.783 kb on + strand at 234.906 kb on - strand at 234.955 kb on + strand, within CA264_01065 at 234.972 kb on + strand, within CA264_01065 at 235.039 kb on + strand, within CA264_01065 at 235.054 kb on - strand, within CA264_01065 at 235.356 kb on + strand at 235.356 kb on + strand at 235.359 kb on - strand at 235.359 kb on - strand at 235.374 kb on + strand at 235.380 kb on - strand at 235.380 kb on - strand at 235.442 kb on - strand at 235.482 kb on + strand, within CA264_01070 at 235.482 kb on + strand, within CA264_01070 at 235.482 kb on + strand, within CA264_01070 at 235.483 kb on - strand, within CA264_01070 at 235.516 kb on + strand, within CA264_01070 at 235.516 kb on + strand, within CA264_01070 at 235.519 kb on - strand, within CA264_01070 at 235.523 kb on + strand, within CA264_01070 at 235.524 kb on - strand, within CA264_01070 at 235.697 kb on - strand, within CA264_01070 at 235.830 kb on - strand, within CA264_01070 at 235.932 kb on - strand, within CA264_01070 at 235.932 kb on - strand, within CA264_01070 at 235.942 kb on - strand, within CA264_01070 at 236.123 kb on - strand at 236.128 kb on + strand at 236.128 kb on + strand at 236.129 kb on - strand at 236.130 kb on + strand at 236.130 kb on + strand at 236.423 kb on + strand, within CA264_01075 at 236.424 kb on - strand, within CA264_01075 at 236.424 kb on - strand, within CA264_01075 at 236.424 kb on - strand, within CA264_01075 at 236.424 kb on - strand, within CA264_01075 at 236.536 kb on + strand, within CA264_01075 at 236.579 kb on + strand, within CA264_01075 at 236.579 kb on + strand, within CA264_01075 at 236.580 kb on - strand, within CA264_01075 at 236.583 kb on + strand, within CA264_01075 at 236.583 kb on + strand, within CA264_01075 at 236.585 kb on + strand, within CA264_01075 at 236.686 kb on + strand, within CA264_01075 at 236.687 kb on - strand, within CA264_01075 at 236.687 kb on - strand, within CA264_01075 at 236.810 kb on + strand at 236.811 kb on - strand at 236.820 kb on - strand at 236.821 kb on + strand at 236.821 kb on + strand at 236.821 kb on + strand at 236.821 kb on + strand at 236.822 kb on - strand at 236.904 kb on + strand at 236.904 kb on + strand at 236.904 kb on + strand at 236.909 kb on + strand at 236.917 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 234,513 + CA264_01060 0.78 -2.7 234,514 - CA264_01060 0.78 -0.4 234,514 - CA264_01060 0.78 -2.3 234,539 + CA264_01060 0.80 -2.0 234,549 - CA264_01060 0.81 -1.9 234,733 + -1.7 234,743 - -1.7 234,783 + -2.4 234,906 - -0.5 234,955 + CA264_01065 0.13 -3.2 234,972 + CA264_01065 0.16 -1.3 235,039 + CA264_01065 0.31 -1.0 235,054 - CA264_01065 0.35 +0.2 235,356 + -0.7 235,356 + -1.3 235,359 - -0.3 235,359 - +0.0 235,374 + -2.0 235,380 - +0.1 235,380 - +0.0 235,442 - +0.2 235,482 + CA264_01070 0.14 +0.2 235,482 + CA264_01070 0.14 -0.3 235,482 + CA264_01070 0.14 +2.3 235,483 - CA264_01070 0.15 -0.7 235,516 + CA264_01070 0.20 -0.2 235,516 + CA264_01070 0.20 -0.5 235,519 - CA264_01070 0.20 -0.2 235,523 + CA264_01070 0.21 -1.1 235,524 - CA264_01070 0.21 -1.0 235,697 - CA264_01070 0.47 +1.3 235,830 - CA264_01070 0.67 -1.5 235,932 - CA264_01070 0.83 -0.0 235,932 - CA264_01070 0.83 +0.0 235,942 - CA264_01070 0.84 -0.3 236,123 - -0.5 236,128 + +0.2 236,128 + -1.8 236,129 - +0.1 236,130 + -0.1 236,130 + +0.9 236,423 + CA264_01075 0.42 -0.9 236,424 - CA264_01075 0.42 +0.1 236,424 - CA264_01075 0.42 +0.0 236,424 - CA264_01075 0.42 -0.5 236,424 - CA264_01075 0.42 +0.3 236,536 + CA264_01075 0.59 +1.1 236,579 + CA264_01075 0.66 -0.9 236,579 + CA264_01075 0.66 -0.1 236,580 - CA264_01075 0.66 -0.0 236,583 + CA264_01075 0.66 -0.1 236,583 + CA264_01075 0.66 +1.1 236,585 + CA264_01075 0.67 -0.4 236,686 + CA264_01075 0.82 -0.7 236,687 - CA264_01075 0.82 +0.4 236,687 - CA264_01075 0.82 +0.3 236,810 + +0.8 236,811 - -0.6 236,820 - -1.2 236,821 + +0.0 236,821 + +0.3 236,821 + +0.2 236,821 + +1.3 236,822 - +1.0 236,904 + -0.3 236,904 + -0.7 236,904 + -0.1 236,909 + -0.6 236,917 - -0.7
Or see this region's nucleotide sequence