Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00910

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00900 and CA264_00905 are separated by 226 nucleotidesCA264_00905 and CA264_00910 are separated by 116 nucleotidesCA264_00910 and CA264_00915 overlap by 4 nucleotides CA264_00900: CA264_00900 - phosphonoacetate hydrolase, at 193,381 to 193,722 _00900 CA264_00905: CA264_00905 - hypothetical protein, at 193,949 to 194,410 _00905 CA264_00910: CA264_00910 - hypothetical protein, at 194,527 to 195,810 _00910 CA264_00915: CA264_00915 - hypothetical protein, at 195,807 to 197,114 _00915 Position (kb) 194 195 196Strain fitness (log2 ratio) -2 -1 0 1 2at 193.539 kb on - strand, within CA264_00900at 193.747 kb on - strandat 193.756 kb on + strandat 193.772 kb on - strandat 193.816 kb on - strandat 193.871 kb on + strandat 193.871 kb on + strandat 193.871 kb on + strandat 193.872 kb on - strandat 193.872 kb on - strandat 193.872 kb on - strandat 193.983 kb on - strandat 193.984 kb on + strandat 193.985 kb on - strandat 194.237 kb on - strand, within CA264_00905at 194.304 kb on + strand, within CA264_00905at 194.362 kb on - strand, within CA264_00905at 194.362 kb on - strand, within CA264_00905at 194.391 kb on + strandat 194.392 kb on - strandat 194.392 kb on - strandat 194.397 kb on - strandat 194.397 kb on - strandat 194.397 kb on - strandat 194.458 kb on - strandat 194.494 kb on + strandat 194.514 kb on - strandat 194.516 kb on - strandat 194.548 kb on + strandat 194.548 kb on + strandat 194.549 kb on - strandat 194.571 kb on + strandat 194.572 kb on - strandat 194.632 kb on + strandat 194.633 kb on - strandat 194.633 kb on - strandat 194.633 kb on - strandat 194.884 kb on + strand, within CA264_00910at 195.015 kb on - strand, within CA264_00910at 195.026 kb on - strand, within CA264_00910at 195.066 kb on + strand, within CA264_00910at 195.067 kb on - strand, within CA264_00910at 195.067 kb on - strand, within CA264_00910at 195.171 kb on - strand, within CA264_00910at 195.243 kb on - strand, within CA264_00910at 195.254 kb on - strand, within CA264_00910at 195.259 kb on + strand, within CA264_00910at 195.260 kb on - strand, within CA264_00910at 195.275 kb on - strand, within CA264_00910at 195.275 kb on - strand, within CA264_00910at 195.427 kb on + strand, within CA264_00910at 195.477 kb on + strand, within CA264_00910at 195.477 kb on + strand, within CA264_00910at 195.514 kb on - strand, within CA264_00910at 195.563 kb on + strand, within CA264_00910at 195.564 kb on - strand, within CA264_00910at 195.564 kb on - strand, within CA264_00910at 195.564 kb on - strand, within CA264_00910at 195.597 kb on + strand, within CA264_00910at 195.597 kb on + strand, within CA264_00910at 195.636 kb on - strand, within CA264_00910at 195.636 kb on - strand, within CA264_00910at 195.636 kb on - strand, within CA264_00910at 195.656 kb on - strand, within CA264_00910at 195.657 kb on + strand, within CA264_00910at 195.658 kb on - strand, within CA264_00910at 195.825 kb on + strandat 195.826 kb on - strandat 195.833 kb on + strandat 195.839 kb on - strandat 195.970 kb on - strand, within CA264_00915at 195.970 kb on - strand, within CA264_00915at 195.970 kb on - strand, within CA264_00915at 196.148 kb on + strand, within CA264_00915at 196.151 kb on - strand, within CA264_00915at 196.170 kb on - strand, within CA264_00915at 196.191 kb on + strand, within CA264_00915at 196.210 kb on - strand, within CA264_00915at 196.280 kb on + strand, within CA264_00915at 196.344 kb on - strand, within CA264_00915at 196.459 kb on - strand, within CA264_00915at 196.486 kb on - strand, within CA264_00915at 196.519 kb on - strand, within CA264_00915at 196.519 kb on - strand, within CA264_00915at 196.519 kb on - strand, within CA264_00915at 196.755 kb on - strand, within CA264_00915at 196.768 kb on - strand, within CA264_00915at 196.783 kb on + strand, within CA264_00915at 196.783 kb on + strand, within CA264_00915at 196.784 kb on - strand, within CA264_00915at 196.784 kb on - strand, within CA264_00915at 196.784 kb on - strand, within CA264_00915at 196.784 kb on - strand, within CA264_00915

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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193,539 - CA264_00900 0.46 -0.2
193,747 - -0.2
193,756 + +0.2
193,772 - -0.3
193,816 - +0.2
193,871 + +0.3
193,871 + +0.3
193,871 + -0.2
193,872 - -0.3
193,872 - +0.1
193,872 - -0.5
193,983 - +0.2
193,984 + -0.1
193,985 - +0.7
194,237 - CA264_00905 0.62 +1.0
194,304 + CA264_00905 0.77 -0.5
194,362 - CA264_00905 0.89 +0.4
194,362 - CA264_00905 0.89 +0.1
194,391 + -0.2
194,392 - +0.3
194,392 - +0.3
194,397 - +0.6
194,397 - +0.4
194,397 - -0.1
194,458 - -0.0
194,494 + -0.3
194,514 - -0.6
194,516 - +1.4
194,548 + +0.0
194,548 + +0.1
194,549 - -0.4
194,571 + -0.1
194,572 - +0.8
194,632 + -1.1
194,633 - -0.0
194,633 - -0.6
194,633 - +1.1
194,884 + CA264_00910 0.28 -0.6
195,015 - CA264_00910 0.38 +0.3
195,026 - CA264_00910 0.39 +0.6
195,066 + CA264_00910 0.42 -0.7
195,067 - CA264_00910 0.42 -0.4
195,067 - CA264_00910 0.42 -1.3
195,171 - CA264_00910 0.50 +0.1
195,243 - CA264_00910 0.56 +0.9
195,254 - CA264_00910 0.57 -0.3
195,259 + CA264_00910 0.57 -0.4
195,260 - CA264_00910 0.57 -0.2
195,275 - CA264_00910 0.58 -1.2
195,275 - CA264_00910 0.58 +0.2
195,427 + CA264_00910 0.70 -0.4
195,477 + CA264_00910 0.74 +0.6
195,477 + CA264_00910 0.74 +0.3
195,514 - CA264_00910 0.77 -0.9
195,563 + CA264_00910 0.81 -0.2
195,564 - CA264_00910 0.81 -1.3
195,564 - CA264_00910 0.81 -1.5
195,564 - CA264_00910 0.81 -0.0
195,597 + CA264_00910 0.83 +1.8
195,597 + CA264_00910 0.83 -0.1
195,636 - CA264_00910 0.86 -1.2
195,636 - CA264_00910 0.86 +0.3
195,636 - CA264_00910 0.86 +0.5
195,656 - CA264_00910 0.88 -1.8
195,657 + CA264_00910 0.88 +1.3
195,658 - CA264_00910 0.88 +0.4
195,825 + -1.6
195,826 - -0.1
195,833 + +0.7
195,839 - -0.5
195,970 - CA264_00915 0.12 +0.3
195,970 - CA264_00915 0.12 -0.4
195,970 - CA264_00915 0.12 -1.6
196,148 + CA264_00915 0.26 -0.5
196,151 - CA264_00915 0.26 -0.0
196,170 - CA264_00915 0.28 -0.4
196,191 + CA264_00915 0.29 -0.5
196,210 - CA264_00915 0.31 -1.6
196,280 + CA264_00915 0.36 +0.1
196,344 - CA264_00915 0.41 +0.4
196,459 - CA264_00915 0.50 +1.6
196,486 - CA264_00915 0.52 -0.5
196,519 - CA264_00915 0.54 +0.4
196,519 - CA264_00915 0.54 -0.2
196,519 - CA264_00915 0.54 -0.2
196,755 - CA264_00915 0.72 -0.2
196,768 - CA264_00915 0.73 +1.0
196,783 + CA264_00915 0.75 +1.6
196,783 + CA264_00915 0.75 -0.5
196,784 - CA264_00915 0.75 +0.7
196,784 - CA264_00915 0.75 -0.0
196,784 - CA264_00915 0.75 +1.0
196,784 - CA264_00915 0.75 -0.0

Or see this region's nucleotide sequence