Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00485 and CA264_00490 are separated by 3 nucleotides CA264_00490 and CA264_00495 are separated by 287 nucleotides
CA264_00485: CA264_00485 - peptidase M4, at 106,154 to 107,341
_00485
CA264_00490: CA264_00490 - TonB-dependent siderophore receptor, at 107,345 to 109,738
_00490
CA264_00495: CA264_00495 - hypothetical protein, at 110,026 to 111,225
_00495
Position (kb)
107
108
109
110 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 106.346 kb on + strand, within CA264_00485 at 106.346 kb on + strand, within CA264_00485 at 106.347 kb on - strand, within CA264_00485 at 106.347 kb on - strand, within CA264_00485 at 106.348 kb on + strand, within CA264_00485 at 106.348 kb on + strand, within CA264_00485 at 106.348 kb on + strand, within CA264_00485 at 106.349 kb on - strand, within CA264_00485 at 106.349 kb on - strand, within CA264_00485 at 106.353 kb on + strand, within CA264_00485 at 106.353 kb on + strand, within CA264_00485 at 106.354 kb on - strand, within CA264_00485 at 106.354 kb on - strand, within CA264_00485 at 106.354 kb on - strand, within CA264_00485 at 106.354 kb on - strand, within CA264_00485 at 106.404 kb on + strand, within CA264_00485 at 106.405 kb on - strand, within CA264_00485 at 106.449 kb on + strand, within CA264_00485 at 106.460 kb on + strand, within CA264_00485 at 106.502 kb on + strand, within CA264_00485 at 106.503 kb on - strand, within CA264_00485 at 106.607 kb on - strand, within CA264_00485 at 106.697 kb on - strand, within CA264_00485 at 106.701 kb on - strand, within CA264_00485 at 106.742 kb on + strand, within CA264_00485 at 106.788 kb on + strand, within CA264_00485 at 106.788 kb on + strand, within CA264_00485 at 106.788 kb on + strand, within CA264_00485 at 106.868 kb on + strand, within CA264_00485 at 106.869 kb on - strand, within CA264_00485 at 106.869 kb on - strand, within CA264_00485 at 106.869 kb on - strand, within CA264_00485 at 106.881 kb on - strand, within CA264_00485 at 106.886 kb on + strand, within CA264_00485 at 106.887 kb on - strand, within CA264_00485 at 106.919 kb on + strand, within CA264_00485 at 106.919 kb on + strand, within CA264_00485 at 106.920 kb on - strand, within CA264_00485 at 106.920 kb on - strand, within CA264_00485 at 106.922 kb on - strand, within CA264_00485 at 106.936 kb on + strand, within CA264_00485 at 106.954 kb on - strand, within CA264_00485 at 106.954 kb on - strand, within CA264_00485 at 106.957 kb on - strand, within CA264_00485 at 106.957 kb on - strand, within CA264_00485 at 106.957 kb on - strand, within CA264_00485 at 107.026 kb on - strand, within CA264_00485 at 107.047 kb on - strand, within CA264_00485 at 107.050 kb on - strand, within CA264_00485 at 107.070 kb on + strand, within CA264_00485 at 107.071 kb on - strand, within CA264_00485 at 107.073 kb on + strand, within CA264_00485 at 107.074 kb on - strand, within CA264_00485 at 107.074 kb on - strand, within CA264_00485 at 107.076 kb on - strand, within CA264_00485 at 107.076 kb on - strand, within CA264_00485 at 107.209 kb on - strand, within CA264_00485 at 107.250 kb on - strand at 107.250 kb on - strand at 107.341 kb on + strand at 107.342 kb on - strand at 107.346 kb on + strand at 107.347 kb on - strand at 107.400 kb on + strand at 107.401 kb on - strand at 107.403 kb on + strand at 107.403 kb on + strand at 107.424 kb on + strand at 107.437 kb on - strand at 107.457 kb on + strand at 107.639 kb on + strand, within CA264_00490 at 107.639 kb on + strand, within CA264_00490 at 107.645 kb on + strand, within CA264_00490 at 107.652 kb on + strand, within CA264_00490 at 107.693 kb on + strand, within CA264_00490 at 107.748 kb on + strand, within CA264_00490 at 107.749 kb on - strand, within CA264_00490 at 107.754 kb on + strand, within CA264_00490 at 107.759 kb on - strand, within CA264_00490 at 107.759 kb on - strand, within CA264_00490 at 107.968 kb on + strand, within CA264_00490 at 107.968 kb on + strand, within CA264_00490 at 108.006 kb on - strand, within CA264_00490 at 108.022 kb on + strand, within CA264_00490 at 108.022 kb on + strand, within CA264_00490 at 108.124 kb on - strand, within CA264_00490 at 108.207 kb on + strand, within CA264_00490 at 108.220 kb on - strand, within CA264_00490 at 108.220 kb on - strand, within CA264_00490 at 108.235 kb on + strand, within CA264_00490 at 108.240 kb on - strand, within CA264_00490 at 108.240 kb on - strand, within CA264_00490 at 108.244 kb on + strand, within CA264_00490 at 108.314 kb on + strand, within CA264_00490 at 108.314 kb on + strand, within CA264_00490 at 108.320 kb on - strand, within CA264_00490 at 108.348 kb on + strand, within CA264_00490 at 108.369 kb on + strand, within CA264_00490 at 108.419 kb on - strand, within CA264_00490 at 108.518 kb on + strand, within CA264_00490 at 108.717 kb on + strand, within CA264_00490 at 108.793 kb on + strand, within CA264_00490 at 108.820 kb on - strand, within CA264_00490 at 108.837 kb on + strand, within CA264_00490 at 108.838 kb on - strand, within CA264_00490 at 108.946 kb on - strand, within CA264_00490 at 109.011 kb on + strand, within CA264_00490 at 109.043 kb on - strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.179 kb on + strand, within CA264_00490 at 109.180 kb on - strand, within CA264_00490 at 109.236 kb on - strand, within CA264_00490 at 109.238 kb on + strand, within CA264_00490 at 109.238 kb on + strand, within CA264_00490 at 109.244 kb on - strand, within CA264_00490 at 109.266 kb on - strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.286 kb on + strand, within CA264_00490 at 109.287 kb on - strand, within CA264_00490 at 109.287 kb on - strand, within CA264_00490 at 109.353 kb on + strand, within CA264_00490 at 109.441 kb on + strand, within CA264_00490 at 109.442 kb on - strand, within CA264_00490 at 109.446 kb on - strand, within CA264_00490 at 109.446 kb on - strand, within CA264_00490 at 109.499 kb on - strand at 109.500 kb on + strand at 109.500 kb on + strand at 109.505 kb on - strand at 109.575 kb on - strand at 109.673 kb on + strand at 109.673 kb on + strand at 109.718 kb on + strand at 109.718 kb on + strand at 109.721 kb on + strand at 109.721 kb on + strand at 109.722 kb on - strand at 109.724 kb on - strand at 109.738 kb on + strand at 109.739 kb on - strand at 109.747 kb on + strand at 109.748 kb on - strand at 109.748 kb on - strand at 109.750 kb on + strand at 109.819 kb on + strand at 109.819 kb on + strand at 109.859 kb on + strand at 109.859 kb on + strand at 109.862 kb on + strand at 109.862 kb on + strand at 109.862 kb on + strand at 109.863 kb on - strand at 109.867 kb on - strand at 109.867 kb on - strand at 109.867 kb on - strand at 109.869 kb on - strand at 109.880 kb on + strand at 109.881 kb on - strand at 109.886 kb on + strand at 109.910 kb on - strand at 109.953 kb on + strand at 109.953 kb on + strand at 109.953 kb on + strand at 110.010 kb on + strand at 110.010 kb on + strand at 110.011 kb on - strand at 110.022 kb on + strand at 110.023 kb on - strand at 110.237 kb on + strand, within CA264_00495 at 110.238 kb on - strand, within CA264_00495 at 110.298 kb on - strand, within CA264_00495 at 110.300 kb on + strand, within CA264_00495 at 110.301 kb on - strand, within CA264_00495 at 110.336 kb on - strand, within CA264_00495 at 110.336 kb on - strand, within CA264_00495 at 110.369 kb on + strand, within CA264_00495 at 110.369 kb on + strand, within CA264_00495 at 110.370 kb on - strand, within CA264_00495 at 110.370 kb on - strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.373 kb on + strand, within CA264_00495 at 110.374 kb on - strand, within CA264_00495 at 110.485 kb on + strand, within CA264_00495 at 110.491 kb on - strand, within CA264_00495 at 110.519 kb on - strand, within CA264_00495 at 110.529 kb on + strand, within CA264_00495 at 110.573 kb on + strand, within CA264_00495 at 110.573 kb on + strand, within CA264_00495 at 110.593 kb on - strand, within CA264_00495 at 110.647 kb on + strand, within CA264_00495 at 110.648 kb on - strand, within CA264_00495 at 110.649 kb on + strand, within CA264_00495 at 110.732 kb on + strand, within CA264_00495
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 106,346 + CA264_00485 0.16 -0.0 106,346 + CA264_00485 0.16 +0.6 106,347 - CA264_00485 0.16 +1.0 106,347 - CA264_00485 0.16 -1.6 106,348 + CA264_00485 0.16 +0.1 106,348 + CA264_00485 0.16 -0.0 106,348 + CA264_00485 0.16 +3.7 106,349 - CA264_00485 0.16 +0.3 106,349 - CA264_00485 0.16 +0.6 106,353 + CA264_00485 0.17 -0.3 106,353 + CA264_00485 0.17 +0.3 106,354 - CA264_00485 0.17 +0.7 106,354 - CA264_00485 0.17 +1.3 106,354 - CA264_00485 0.17 +0.1 106,354 - CA264_00485 0.17 +0.4 106,404 + CA264_00485 0.21 -0.2 106,405 - CA264_00485 0.21 +0.6 106,449 + CA264_00485 0.25 +1.4 106,460 + CA264_00485 0.26 +0.6 106,502 + CA264_00485 0.29 +0.0 106,503 - CA264_00485 0.29 +0.2 106,607 - CA264_00485 0.38 -0.8 106,697 - CA264_00485 0.46 -0.3 106,701 - CA264_00485 0.46 +0.6 106,742 + CA264_00485 0.49 +0.6 106,788 + CA264_00485 0.53 -0.1 106,788 + CA264_00485 0.53 +0.6 106,788 + CA264_00485 0.53 -0.3 106,868 + CA264_00485 0.60 +1.3 106,869 - CA264_00485 0.60 +0.6 106,869 - CA264_00485 0.60 +0.5 106,869 - CA264_00485 0.60 +0.7 106,881 - CA264_00485 0.61 +0.0 106,886 + CA264_00485 0.62 +0.1 106,887 - CA264_00485 0.62 +0.4 106,919 + CA264_00485 0.64 -0.2 106,919 + CA264_00485 0.64 -0.9 106,920 - CA264_00485 0.64 +0.4 106,920 - CA264_00485 0.64 +0.9 106,922 - CA264_00485 0.65 +0.7 106,936 + CA264_00485 0.66 -0.0 106,954 - CA264_00485 0.67 +1.1 106,954 - CA264_00485 0.67 +0.2 106,957 - CA264_00485 0.68 +0.4 106,957 - CA264_00485 0.68 -0.8 106,957 - CA264_00485 0.68 +0.1 107,026 - CA264_00485 0.73 +0.7 107,047 - CA264_00485 0.75 +1.0 107,050 - CA264_00485 0.75 -1.9 107,070 + CA264_00485 0.77 -0.3 107,071 - CA264_00485 0.77 +0.2 107,073 + CA264_00485 0.77 -0.5 107,074 - CA264_00485 0.77 +0.3 107,074 - CA264_00485 0.77 -0.3 107,076 - CA264_00485 0.78 +0.1 107,076 - CA264_00485 0.78 +0.0 107,209 - CA264_00485 0.89 +0.6 107,250 - +0.3 107,250 - +0.6 107,341 + +0.3 107,342 - -0.6 107,346 + +1.3 107,347 - +0.6 107,400 + +1.7 107,401 - +0.6 107,403 + -0.3 107,403 + -0.1 107,424 + +0.2 107,437 - +1.3 107,457 + +0.4 107,639 + CA264_00490 0.12 +0.5 107,639 + CA264_00490 0.12 -1.0 107,645 + CA264_00490 0.13 +0.1 107,652 + CA264_00490 0.13 +0.5 107,693 + CA264_00490 0.15 +0.9 107,748 + CA264_00490 0.17 -0.1 107,749 - CA264_00490 0.17 -0.3 107,754 + CA264_00490 0.17 +1.9 107,759 - CA264_00490 0.17 +0.3 107,759 - CA264_00490 0.17 +1.2 107,968 + CA264_00490 0.26 -0.1 107,968 + CA264_00490 0.26 -0.3 108,006 - CA264_00490 0.28 +0.7 108,022 + CA264_00490 0.28 +0.5 108,022 + CA264_00490 0.28 +0.7 108,124 - CA264_00490 0.33 -0.3 108,207 + CA264_00490 0.36 +0.9 108,220 - CA264_00490 0.37 +0.9 108,220 - CA264_00490 0.37 +1.0 108,235 + CA264_00490 0.37 +0.0 108,240 - CA264_00490 0.37 -0.3 108,240 - CA264_00490 0.37 -0.6 108,244 + CA264_00490 0.38 -0.1 108,314 + CA264_00490 0.40 +0.1 108,314 + CA264_00490 0.40 -0.1 108,320 - CA264_00490 0.41 +1.0 108,348 + CA264_00490 0.42 +0.5 108,369 + CA264_00490 0.43 +0.2 108,419 - CA264_00490 0.45 +1.2 108,518 + CA264_00490 0.49 +0.4 108,717 + CA264_00490 0.57 +0.2 108,793 + CA264_00490 0.60 +0.1 108,820 - CA264_00490 0.62 +0.5 108,837 + CA264_00490 0.62 +1.1 108,838 - CA264_00490 0.62 +0.4 108,946 - CA264_00490 0.67 +1.0 109,011 + CA264_00490 0.70 -0.3 109,043 - CA264_00490 0.71 -0.0 109,179 + CA264_00490 0.77 +0.3 109,179 + CA264_00490 0.77 +1.3 109,179 + CA264_00490 0.77 +0.1 109,180 - CA264_00490 0.77 +0.3 109,236 - CA264_00490 0.79 +2.0 109,238 + CA264_00490 0.79 +1.0 109,238 + CA264_00490 0.79 +0.4 109,244 - CA264_00490 0.79 -0.0 109,266 - CA264_00490 0.80 +0.3 109,286 + CA264_00490 0.81 +1.2 109,286 + CA264_00490 0.81 +0.5 109,286 + CA264_00490 0.81 +0.2 109,286 + CA264_00490 0.81 +0.2 109,286 + CA264_00490 0.81 +1.3 109,287 - CA264_00490 0.81 +0.9 109,287 - CA264_00490 0.81 -0.4 109,353 + CA264_00490 0.84 -0.2 109,441 + CA264_00490 0.88 -0.3 109,442 - CA264_00490 0.88 +0.5 109,446 - CA264_00490 0.88 +0.2 109,446 - CA264_00490 0.88 -1.2 109,499 - -0.9 109,500 + +1.2 109,500 + +0.4 109,505 - -1.6 109,575 - +0.4 109,673 + +0.5 109,673 + +0.1 109,718 + +0.6 109,718 + +0.1 109,721 + +1.1 109,721 + -0.5 109,722 - -0.7 109,724 - +1.6 109,738 + -0.2 109,739 - +1.3 109,747 + +0.5 109,748 - +2.0 109,748 - +1.3 109,750 + +0.3 109,819 + +0.4 109,819 + +1.1 109,859 + +0.2 109,859 + -2.4 109,862 + -0.3 109,862 + +0.4 109,862 + +0.4 109,863 - +0.5 109,867 - -0.3 109,867 - +1.1 109,867 - +0.4 109,869 - +0.2 109,880 + -0.4 109,881 - -0.1 109,886 + -0.4 109,910 - +0.5 109,953 + -0.5 109,953 + -0.3 109,953 + -1.2 110,010 + -0.4 110,010 + -0.4 110,011 - +0.3 110,022 + +0.0 110,023 - -0.9 110,237 + CA264_00495 0.18 -0.5 110,238 - CA264_00495 0.18 +1.3 110,298 - CA264_00495 0.23 -0.5 110,300 + CA264_00495 0.23 -0.9 110,301 - CA264_00495 0.23 -1.8 110,336 - CA264_00495 0.26 -0.4 110,336 - CA264_00495 0.26 -1.0 110,369 + CA264_00495 0.29 +0.0 110,369 + CA264_00495 0.29 +0.4 110,370 - CA264_00495 0.29 -0.9 110,370 - CA264_00495 0.29 -1.6 110,373 + CA264_00495 0.29 +0.2 110,373 + CA264_00495 0.29 -0.7 110,373 + CA264_00495 0.29 +0.8 110,374 - CA264_00495 0.29 -0.4 110,485 + CA264_00495 0.38 -0.0 110,491 - CA264_00495 0.39 -0.5 110,519 - CA264_00495 0.41 -1.4 110,529 + CA264_00495 0.42 -1.0 110,573 + CA264_00495 0.46 -0.5 110,573 + CA264_00495 0.46 -0.3 110,593 - CA264_00495 0.47 -0.5 110,647 + CA264_00495 0.52 -0.3 110,648 - CA264_00495 0.52 +0.2 110,649 + CA264_00495 0.52 -0.8 110,732 + CA264_00495 0.59 +0.4
Or see this region's nucleotide sequence