Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00345 and CA264_00350 are separated by 149 nucleotides CA264_00350 and CA264_00355 are separated by 76 nucleotides CA264_00355 and CA264_00360 are separated by 208 nucleotides
CA264_00345: CA264_00345 - peptidyl-prolyl cis-trans isomerase, at 79,336 to 79,794
_00345
CA264_00350: CA264_00350 - hypothetical protein, at 79,944 to 80,618
_00350
CA264_00355: CA264_00355 - short-chain dehydrogenase, at 80,695 to 81,396
_00355
CA264_00360: CA264_00360 - ribosome small subunit-dependent GTPase A, at 81,605 to 82,528
_00360
Position (kb) 80
81
82 Strain fitness (log2 ratio) -1
0
1
2 at 79.705 kb on + strand, within CA264_00345 at 79.713 kb on + strand, within CA264_00345 at 79.759 kb on + strand at 79.802 kb on - strand at 79.808 kb on + strand at 79.824 kb on - strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.825 kb on + strand at 79.826 kb on - strand at 79.843 kb on - strand at 79.913 kb on - strand at 79.916 kb on + strand at 79.920 kb on + strand at 79.920 kb on + strand at 79.921 kb on - strand at 79.921 kb on - strand at 79.968 kb on + strand at 79.969 kb on - strand at 79.989 kb on - strand at 80.103 kb on - strand, within CA264_00350 at 80.182 kb on + strand, within CA264_00350 at 80.183 kb on - strand, within CA264_00350 at 80.239 kb on - strand, within CA264_00350 at 80.310 kb on + strand, within CA264_00350 at 80.310 kb on + strand, within CA264_00350 at 80.446 kb on + strand, within CA264_00350 at 80.456 kb on - strand, within CA264_00350 at 80.456 kb on - strand, within CA264_00350 at 80.546 kb on - strand, within CA264_00350 at 80.546 kb on - strand, within CA264_00350 at 80.599 kb on + strand at 80.658 kb on + strand at 80.696 kb on + strand at 80.852 kb on - strand, within CA264_00355 at 80.876 kb on - strand, within CA264_00355 at 80.888 kb on + strand, within CA264_00355 at 80.889 kb on - strand, within CA264_00355 at 80.952 kb on - strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.083 kb on + strand, within CA264_00355 at 81.084 kb on - strand, within CA264_00355 at 81.192 kb on + strand, within CA264_00355 at 81.193 kb on - strand, within CA264_00355 at 81.205 kb on + strand, within CA264_00355 at 81.213 kb on - strand, within CA264_00355 at 81.250 kb on + strand, within CA264_00355 at 81.301 kb on + strand, within CA264_00355 at 81.376 kb on - strand at 81.399 kb on + strand at 81.488 kb on - strand at 81.543 kb on + strand at 81.544 kb on - strand at 81.596 kb on - strand at 81.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 79,705 + CA264_00345 0.80 -0.9 79,713 + CA264_00345 0.82 -0.4 79,759 + +1.6 79,802 - -1.2 79,808 + -0.8 79,824 - -0.3 79,825 + -1.5 79,825 + +0.2 79,825 + +0.1 79,826 - -1.0 79,843 - -1.0 79,913 - -0.7 79,916 + -0.3 79,920 + -0.1 79,920 + -0.4 79,921 - -0.6 79,921 - -1.4 79,968 + +0.1 79,969 - -0.2 79,989 - +0.0 80,103 - CA264_00350 0.24 -0.7 80,182 + CA264_00350 0.35 -0.1 80,183 - CA264_00350 0.35 -0.4 80,239 - CA264_00350 0.44 +0.0 80,310 + CA264_00350 0.54 -1.4 80,310 + CA264_00350 0.54 -0.1 80,446 + CA264_00350 0.74 -1.6 80,456 - CA264_00350 0.76 -0.8 80,456 - CA264_00350 0.76 +0.2 80,546 - CA264_00350 0.89 +0.2 80,546 - CA264_00350 0.89 -0.6 80,599 + -0.7 80,658 + -0.7 80,696 + +0.0 80,852 - CA264_00355 0.22 -0.3 80,876 - CA264_00355 0.26 -0.1 80,888 + CA264_00355 0.27 +0.7 80,889 - CA264_00355 0.28 -1.3 80,952 - CA264_00355 0.37 +2.2 81,083 + CA264_00355 0.55 -0.7 81,083 + CA264_00355 0.55 -0.7 81,083 + CA264_00355 0.55 +1.0 81,083 + CA264_00355 0.55 -0.3 81,083 + CA264_00355 0.55 -0.0 81,083 + CA264_00355 0.55 -0.1 81,084 - CA264_00355 0.55 +0.3 81,192 + CA264_00355 0.71 -0.0 81,193 - CA264_00355 0.71 +0.7 81,205 + CA264_00355 0.73 -0.5 81,213 - CA264_00355 0.74 +0.3 81,250 + CA264_00355 0.79 -0.7 81,301 + CA264_00355 0.86 +0.4 81,376 - -0.2 81,399 + -0.5 81,488 - -0.4 81,543 + +0.8 81,544 - +0.4 81,596 - -0.4 81,607 - -0.5
Or see this region's nucleotide sequence