Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_842 and PfGW456L13_843 are separated by 2 nucleotides PfGW456L13_843 and PfGW456L13_844 are separated by 13 nucleotides PfGW456L13_844 and PfGW456L13_845 are separated by 4 nucleotides
PfGW456L13_842 - Tyrosine recombinase XerC, at 949,784 to 950,683
_842
PfGW456L13_843 - Protein of unknown function DUF484, at 950,686 to 951,411
_843
PfGW456L13_844 - Diaminopimelate epimerase (EC 5.1.1.7), at 951,425 to 952,255
_844
PfGW456L13_845 - Diaminopimelate decarboxylase (EC 4.1.1.20), at 952,260 to 953,507
_845
Position (kb) 951
952
953 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 950.436 kb on + strand, within PfGW456L13_842 at 950.442 kb on + strand, within PfGW456L13_842 at 950.442 kb on + strand, within PfGW456L13_842 at 950.443 kb on - strand, within PfGW456L13_842 at 950.443 kb on - strand, within PfGW456L13_842 at 950.465 kb on + strand, within PfGW456L13_842 at 950.661 kb on + strand at 950.662 kb on - strand at 950.692 kb on + strand at 950.750 kb on + strand at 950.750 kb on + strand at 950.750 kb on + strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.751 kb on - strand at 950.784 kb on - strand, within PfGW456L13_843 at 950.784 kb on - strand, within PfGW456L13_843 at 951.270 kb on + strand, within PfGW456L13_843 at 951.338 kb on - strand, within PfGW456L13_843 at 951.338 kb on - strand, within PfGW456L13_843 at 951.447 kb on + strand at 951.447 kb on + strand at 951.447 kb on + strand at 951.447 kb on + strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.448 kb on - strand at 951.449 kb on + strand at 951.449 kb on + strand at 951.449 kb on + strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.450 kb on - strand at 951.537 kb on - strand, within PfGW456L13_844 at 951.835 kb on - strand, within PfGW456L13_844 at 952.240 kb on + strand at 952.240 kb on + strand at 952.240 kb on + strand at 952.241 kb on - strand at 952.262 kb on - strand at 952.288 kb on + strand at 952.288 kb on + strand at 952.288 kb on + strand at 952.288 kb on + strand at 952.288 kb on + strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.289 kb on - strand at 952.375 kb on + strand at 952.375 kb on + strand at 952.376 kb on - strand at 952.376 kb on - strand at 952.376 kb on - strand at 952.562 kb on - strand, within PfGW456L13_845 at 952.562 kb on - strand, within PfGW456L13_845 at 952.562 kb on - strand, within PfGW456L13_845 at 952.637 kb on - strand, within PfGW456L13_845 at 952.744 kb on + strand, within PfGW456L13_845 at 952.744 kb on + strand, within PfGW456L13_845 at 952.745 kb on - strand, within PfGW456L13_845 at 952.745 kb on - strand, within PfGW456L13_845 at 952.745 kb on - strand, within PfGW456L13_845 at 952.745 kb on - strand, within PfGW456L13_845 at 952.819 kb on + strand, within PfGW456L13_845 at 952.819 kb on + strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.820 kb on - strand, within PfGW456L13_845 at 952.963 kb on + strand, within PfGW456L13_845 at 952.963 kb on + strand, within PfGW456L13_845 at 952.963 kb on + strand, within PfGW456L13_845 at 952.963 kb on + strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 952.964 kb on - strand, within PfGW456L13_845 at 953.026 kb on + strand, within PfGW456L13_845
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 950,436 + PfGW456L13_842 0.72 -0.9 950,442 + PfGW456L13_842 0.73 +1.2 950,442 + PfGW456L13_842 0.73 -0.8 950,443 - PfGW456L13_842 0.73 -1.1 950,443 - PfGW456L13_842 0.73 +0.8 950,465 + PfGW456L13_842 0.76 -0.3 950,661 + -0.5 950,662 - +0.3 950,692 + -0.4 950,750 + +0.5 950,750 + +0.6 950,750 + -0.4 950,751 - +0.6 950,751 - +0.3 950,751 - +0.4 950,751 - +1.2 950,751 - +0.1 950,751 - +0.3 950,751 - +0.1 950,751 - +0.2 950,784 - PfGW456L13_843 0.13 +1.1 950,784 - PfGW456L13_843 0.13 +0.4 951,270 + PfGW456L13_843 0.80 -0.2 951,338 - PfGW456L13_843 0.90 +0.7 951,338 - PfGW456L13_843 0.90 +0.0 951,447 + -0.1 951,447 + +0.1 951,447 + +0.6 951,447 + -0.8 951,448 - +0.5 951,448 - +1.6 951,448 - +0.6 951,448 - +0.8 951,449 + +0.7 951,449 + +0.3 951,449 + +0.5 951,450 - +0.1 951,450 - +1.5 951,450 - +1.1 951,450 - +0.3 951,450 - -0.5 951,450 - +0.1 951,450 - -0.3 951,450 - +0.3 951,450 - -0.1 951,450 - -0.3 951,450 - +0.3 951,450 - +0.7 951,450 - -0.3 951,450 - +0.3 951,450 - +0.0 951,450 - +0.0 951,537 - PfGW456L13_844 0.13 +0.4 951,835 - PfGW456L13_844 0.49 +0.5 952,240 + -0.1 952,240 + -1.3 952,240 + -0.6 952,241 - -0.9 952,262 - +0.1 952,288 + -1.1 952,288 + -0.3 952,288 + -1.2 952,288 + +1.8 952,288 + -0.3 952,289 - -1.3 952,289 - -1.3 952,289 - -0.4 952,289 - -1.8 952,289 - -0.1 952,289 - -0.2 952,289 - +0.6 952,289 - +0.6 952,289 - -2.1 952,289 - -2.4 952,289 - +0.5 952,289 - -1.9 952,375 + -0.2 952,375 + -2.3 952,376 - -0.4 952,376 - -1.4 952,376 - +0.3 952,562 - PfGW456L13_845 0.24 -0.6 952,562 - PfGW456L13_845 0.24 +0.6 952,562 - PfGW456L13_845 0.24 +0.2 952,637 - PfGW456L13_845 0.30 +0.1 952,744 + PfGW456L13_845 0.39 -0.6 952,744 + PfGW456L13_845 0.39 +0.0 952,745 - PfGW456L13_845 0.39 +0.2 952,745 - PfGW456L13_845 0.39 -0.3 952,745 - PfGW456L13_845 0.39 +0.1 952,745 - PfGW456L13_845 0.39 -1.6 952,819 + PfGW456L13_845 0.45 +0.0 952,819 + PfGW456L13_845 0.45 +0.7 952,820 - PfGW456L13_845 0.45 -3.6 952,820 - PfGW456L13_845 0.45 -0.3 952,820 - PfGW456L13_845 0.45 -0.3 952,820 - PfGW456L13_845 0.45 +0.2 952,820 - PfGW456L13_845 0.45 -0.6 952,820 - PfGW456L13_845 0.45 -1.3 952,963 + PfGW456L13_845 0.56 -0.4 952,963 + PfGW456L13_845 0.56 -0.2 952,963 + PfGW456L13_845 0.56 -0.1 952,963 + PfGW456L13_845 0.56 -0.9 952,964 - PfGW456L13_845 0.56 -0.8 952,964 - PfGW456L13_845 0.56 +0.2 952,964 - PfGW456L13_845 0.56 -1.7 952,964 - PfGW456L13_845 0.56 -0.4 952,964 - PfGW456L13_845 0.56 -0.7 952,964 - PfGW456L13_845 0.56 +0.2 952,964 - PfGW456L13_845 0.56 -1.8 952,964 - PfGW456L13_845 0.56 -0.8 953,026 + PfGW456L13_845 0.61 -0.8
Or see this region's nucleotide sequence