Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_671 and PfGW456L13_672 overlap by 4 nucleotides PfGW456L13_672 and PfGW456L13_673 are separated by 57 nucleotides PfGW456L13_673 and PfGW456L13_674 are separated by 9 nucleotides
PfGW456L13_671 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, at 763,742 to 765,640
_671
PfGW456L13_672 - rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB, at 765,637 to 766,281
_672
PfGW456L13_673 - Chromosome (plasmid) partitioning protein ParA, at 766,339 to 767,097
_673
PfGW456L13_674 - Chromosome (plasmid) partitioning protein ParB, at 767,107 to 767,979
_674
Position (kb) 765
766
767 Strain fitness (log2 ratio) -2
-1
0
1
2 at 765.756 kb on - strand, within PfGW456L13_672 at 765.772 kb on + strand, within PfGW456L13_672 at 765.773 kb on - strand, within PfGW456L13_672 at 765.773 kb on - strand, within PfGW456L13_672 at 765.773 kb on - strand, within PfGW456L13_672 at 765.891 kb on + strand, within PfGW456L13_672 at 765.891 kb on + strand, within PfGW456L13_672 at 765.891 kb on + strand, within PfGW456L13_672 at 766.018 kb on - strand, within PfGW456L13_672 at 766.018 kb on - strand, within PfGW456L13_672 at 766.104 kb on + strand, within PfGW456L13_672 at 766.105 kb on - strand, within PfGW456L13_672 at 766.105 kb on - strand, within PfGW456L13_672 at 766.181 kb on + strand, within PfGW456L13_672 at 766.311 kb on - strand at 766.444 kb on - strand, within PfGW456L13_673 at 766.452 kb on - strand, within PfGW456L13_673 at 766.452 kb on - strand, within PfGW456L13_673 at 766.455 kb on + strand, within PfGW456L13_673 at 766.455 kb on + strand, within PfGW456L13_673 at 766.455 kb on + strand, within PfGW456L13_673 at 766.455 kb on + strand, within PfGW456L13_673 at 766.456 kb on - strand, within PfGW456L13_673 at 766.456 kb on - strand, within PfGW456L13_673 at 766.456 kb on - strand, within PfGW456L13_673 at 766.456 kb on - strand, within PfGW456L13_673 at 766.543 kb on + strand, within PfGW456L13_673 at 766.654 kb on + strand, within PfGW456L13_673 at 766.654 kb on + strand, within PfGW456L13_673 at 766.654 kb on + strand, within PfGW456L13_673 at 766.660 kb on + strand, within PfGW456L13_673 at 766.660 kb on + strand, within PfGW456L13_673 at 766.660 kb on + strand, within PfGW456L13_673 at 766.660 kb on + strand, within PfGW456L13_673 at 766.661 kb on - strand, within PfGW456L13_673 at 766.661 kb on - strand, within PfGW456L13_673 at 766.661 kb on - strand, within PfGW456L13_673 at 766.735 kb on - strand, within PfGW456L13_673 at 766.735 kb on - strand, within PfGW456L13_673 at 766.753 kb on + strand, within PfGW456L13_673 at 766.753 kb on + strand, within PfGW456L13_673 at 766.754 kb on - strand, within PfGW456L13_673 at 766.788 kb on + strand, within PfGW456L13_673 at 766.800 kb on + strand, within PfGW456L13_673 at 766.800 kb on + strand, within PfGW456L13_673 at 766.801 kb on - strand, within PfGW456L13_673 at 766.801 kb on - strand, within PfGW456L13_673 at 766.801 kb on - strand, within PfGW456L13_673 at 766.801 kb on - strand, within PfGW456L13_673 at 766.801 kb on - strand, within PfGW456L13_673 at 766.848 kb on + strand, within PfGW456L13_673 at 766.848 kb on + strand, within PfGW456L13_673 at 766.849 kb on - strand, within PfGW456L13_673 at 766.849 kb on - strand, within PfGW456L13_673 at 766.849 kb on - strand, within PfGW456L13_673 at 766.855 kb on + strand, within PfGW456L13_673 at 766.855 kb on + strand, within PfGW456L13_673 at 766.855 kb on + strand, within PfGW456L13_673 at 766.855 kb on + strand, within PfGW456L13_673 at 766.855 kb on + strand, within PfGW456L13_673 at 766.856 kb on - strand, within PfGW456L13_673 at 766.856 kb on - strand, within PfGW456L13_673 at 766.856 kb on - strand, within PfGW456L13_673 at 766.856 kb on - strand, within PfGW456L13_673 at 766.924 kb on + strand, within PfGW456L13_673 at 766.925 kb on - strand, within PfGW456L13_673 at 766.947 kb on + strand, within PfGW456L13_673 at 766.948 kb on - strand, within PfGW456L13_673 at 766.948 kb on - strand, within PfGW456L13_673 at 766.948 kb on - strand, within PfGW456L13_673 at 766.973 kb on - strand, within PfGW456L13_673 at 766.973 kb on - strand, within PfGW456L13_673 at 766.993 kb on + strand, within PfGW456L13_673 at 767.095 kb on + strand at 767.095 kb on + strand at 767.095 kb on + strand at 767.095 kb on + strand at 767.095 kb on + strand at 767.095 kb on + strand at 767.096 kb on - strand at 767.096 kb on - strand at 767.096 kb on - strand at 767.096 kb on - strand at 767.096 kb on - strand at 767.096 kb on - strand at 767.251 kb on + strand, within PfGW456L13_674 at 767.251 kb on + strand, within PfGW456L13_674 at 767.252 kb on - strand, within PfGW456L13_674 at 767.252 kb on - strand, within PfGW456L13_674 at 767.252 kb on - strand, within PfGW456L13_674 at 767.252 kb on - strand, within PfGW456L13_674 at 767.252 kb on - strand, within PfGW456L13_674
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 765,756 - PfGW456L13_672 0.18 -1.5 765,772 + PfGW456L13_672 0.21 -1.2 765,773 - PfGW456L13_672 0.21 +0.4 765,773 - PfGW456L13_672 0.21 +1.7 765,773 - PfGW456L13_672 0.21 -0.3 765,891 + PfGW456L13_672 0.39 -0.5 765,891 + PfGW456L13_672 0.39 +0.2 765,891 + PfGW456L13_672 0.39 -0.5 766,018 - PfGW456L13_672 0.59 +0.6 766,018 - PfGW456L13_672 0.59 +0.9 766,104 + PfGW456L13_672 0.72 -0.5 766,105 - PfGW456L13_672 0.73 +0.4 766,105 - PfGW456L13_672 0.73 -0.1 766,181 + PfGW456L13_672 0.84 -0.8 766,311 - -1.0 766,444 - PfGW456L13_673 0.14 +1.0 766,452 - PfGW456L13_673 0.15 -0.0 766,452 - PfGW456L13_673 0.15 -2.0 766,455 + PfGW456L13_673 0.15 +1.3 766,455 + PfGW456L13_673 0.15 +0.3 766,455 + PfGW456L13_673 0.15 -0.4 766,455 + PfGW456L13_673 0.15 -0.9 766,456 - PfGW456L13_673 0.15 +0.6 766,456 - PfGW456L13_673 0.15 +1.1 766,456 - PfGW456L13_673 0.15 +0.6 766,456 - PfGW456L13_673 0.15 +2.6 766,543 + PfGW456L13_673 0.27 -1.6 766,654 + PfGW456L13_673 0.42 -0.2 766,654 + PfGW456L13_673 0.42 -0.6 766,654 + PfGW456L13_673 0.42 +0.2 766,660 + PfGW456L13_673 0.42 +0.2 766,660 + PfGW456L13_673 0.42 -0.2 766,660 + PfGW456L13_673 0.42 -0.6 766,660 + PfGW456L13_673 0.42 -0.3 766,661 - PfGW456L13_673 0.42 -1.7 766,661 - PfGW456L13_673 0.42 -0.9 766,661 - PfGW456L13_673 0.42 -0.6 766,735 - PfGW456L13_673 0.52 +0.6 766,735 - PfGW456L13_673 0.52 +0.4 766,753 + PfGW456L13_673 0.55 -1.6 766,753 + PfGW456L13_673 0.55 -1.1 766,754 - PfGW456L13_673 0.55 -1.1 766,788 + PfGW456L13_673 0.59 +0.1 766,800 + PfGW456L13_673 0.61 -0.7 766,800 + PfGW456L13_673 0.61 -0.1 766,801 - PfGW456L13_673 0.61 +0.6 766,801 - PfGW456L13_673 0.61 -0.5 766,801 - PfGW456L13_673 0.61 +0.4 766,801 - PfGW456L13_673 0.61 +0.2 766,801 - PfGW456L13_673 0.61 +0.9 766,848 + PfGW456L13_673 0.67 -1.4 766,848 + PfGW456L13_673 0.67 -2.0 766,849 - PfGW456L13_673 0.67 +1.0 766,849 - PfGW456L13_673 0.67 +0.9 766,849 - PfGW456L13_673 0.67 -0.0 766,855 + PfGW456L13_673 0.68 +0.3 766,855 + PfGW456L13_673 0.68 +0.8 766,855 + PfGW456L13_673 0.68 +0.5 766,855 + PfGW456L13_673 0.68 -1.2 766,855 + PfGW456L13_673 0.68 -0.9 766,856 - PfGW456L13_673 0.68 +1.6 766,856 - PfGW456L13_673 0.68 -0.3 766,856 - PfGW456L13_673 0.68 -0.8 766,856 - PfGW456L13_673 0.68 +0.8 766,924 + PfGW456L13_673 0.77 -0.7 766,925 - PfGW456L13_673 0.77 -0.6 766,947 + PfGW456L13_673 0.80 -1.3 766,948 - PfGW456L13_673 0.80 +0.0 766,948 - PfGW456L13_673 0.80 +0.7 766,948 - PfGW456L13_673 0.80 -1.7 766,973 - PfGW456L13_673 0.84 -2.5 766,973 - PfGW456L13_673 0.84 +0.4 766,993 + PfGW456L13_673 0.86 -0.1 767,095 + -0.3 767,095 + -1.4 767,095 + -0.6 767,095 + -0.7 767,095 + +0.1 767,095 + -0.6 767,096 - +0.2 767,096 - +0.4 767,096 - -0.3 767,096 - +2.0 767,096 - +0.2 767,096 - -1.0 767,251 + PfGW456L13_674 0.16 +0.9 767,251 + PfGW456L13_674 0.16 -0.4 767,252 - PfGW456L13_674 0.17 -1.2 767,252 - PfGW456L13_674 0.17 -0.0 767,252 - PfGW456L13_674 0.17 -0.5 767,252 - PfGW456L13_674 0.17 +0.2 767,252 - PfGW456L13_674 0.17 +0.8
Or see this region's nucleotide sequence