Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_60 and PfGW456L13_61 are separated by 187 nucleotides PfGW456L13_61 and PfGW456L13_62 are separated by 78 nucleotides PfGW456L13_62 and PfGW456L13_63 are separated by 148 nucleotides
PfGW456L13_60 - membrane protein, MarC family, at 72,300 to 72,896
_60
PfGW456L13_61 - hypothetical protein, at 73,084 to 73,407
_61
PfGW456L13_62 - hypothetical protein, at 73,486 to 73,599
_62
PfGW456L13_63 - hypothetical protein, at 73,748 to 74,167
_63
Position (kb)
73
74 Strain fitness (log2 ratio)
-2
-1
0
1 at 72.504 kb on - strand, within PfGW456L13_60 at 72.743 kb on + strand, within PfGW456L13_60 at 72.743 kb on + strand, within PfGW456L13_60 at 72.744 kb on - strand, within PfGW456L13_60 at 73.028 kb on - strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.061 kb on + strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.062 kb on - strand at 73.156 kb on + strand, within PfGW456L13_61 at 73.157 kb on - strand, within PfGW456L13_61 at 73.260 kb on - strand, within PfGW456L13_61 at 73.260 kb on - strand, within PfGW456L13_61 at 73.435 kb on + strand at 73.436 kb on - strand at 73.531 kb on + strand, within PfGW456L13_62 at 73.598 kb on - strand at 73.655 kb on - strand at 73.693 kb on - strand at 73.804 kb on - strand, within PfGW456L13_63 at 74.083 kb on + strand, within PfGW456L13_63 at 74.084 kb on - strand, within PfGW456L13_63 at 74.084 kb on - strand, within PfGW456L13_63 at 74.084 kb on - strand, within PfGW456L13_63 at 74.156 kb on - strand at 74.174 kb on - strand at 74.183 kb on + strand at 74.188 kb on + strand at 74.308 kb on - strand at 74.370 kb on - strand at 74.390 kb on + strand at 74.405 kb on + strand at 74.406 kb on - strand at 74.429 kb on - strand at 74.463 kb on - strand at 74.578 kb on + strand at 74.578 kb on + strand at 74.580 kb on + strand at 74.581 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 72,504 - PfGW456L13_60 0.34 +0.9 72,743 + PfGW456L13_60 0.74 -0.6 72,743 + PfGW456L13_60 0.74 -1.0 72,744 - PfGW456L13_60 0.74 +0.1 73,028 - -0.3 73,061 + +0.2 73,061 + +0.4 73,061 + +0.6 73,061 + -0.1 73,062 - -0.9 73,062 - -0.1 73,062 - +0.4 73,062 - -2.0 73,156 + PfGW456L13_61 0.22 +0.3 73,157 - PfGW456L13_61 0.23 -0.2 73,260 - PfGW456L13_61 0.54 +1.1 73,260 - PfGW456L13_61 0.54 -0.1 73,435 + -1.7 73,436 - -1.1 73,531 + PfGW456L13_62 0.39 +1.0 73,598 - -0.6 73,655 - +0.6 73,693 - -0.1 73,804 - PfGW456L13_63 0.13 +0.4 74,083 + PfGW456L13_63 0.80 +0.2 74,084 - PfGW456L13_63 0.80 -1.6 74,084 - PfGW456L13_63 0.80 +0.6 74,084 - PfGW456L13_63 0.80 +0.4 74,156 - -0.4 74,174 - -0.9 74,183 + +0.9 74,188 + +1.0 74,308 - -0.2 74,370 - -0.1 74,390 + +1.2 74,405 + -0.7 74,406 - +1.2 74,429 - +0.1 74,463 - -0.1 74,578 + -1.1 74,578 + +0.2 74,580 + +0.2 74,581 - -0.2
Or see this region's nucleotide sequence