Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5133 and PfGW456L13_5134 are separated by 1 nucleotides PfGW456L13_5134 and PfGW456L13_5135 are separated by 14 nucleotides PfGW456L13_5135 and PfGW456L13_5136 are separated by 185 nucleotides
PfGW456L13_5133 - N-acyl-D-amino-acid deacylase (EC 3.5.1.81), at 5,729,981 to 5,731,438
_5133
PfGW456L13_5134 - Transcriptional regulator, RpiR family, at 5,731,440 to 5,732,300
_5134
PfGW456L13_5135 - Gluconate transporter family protein, at 5,732,315 to 5,733,664
_5135
PfGW456L13_5136 - Sulfate permease, at 5,733,850 to 5,735,295
_5136
Position (kb) 5732
5733
5734 Strain fitness (log2 ratio) -1
0
1
2 at 5731.432 kb on - strand at 5731.603 kb on + strand, within PfGW456L13_5134 at 5731.603 kb on + strand, within PfGW456L13_5134 at 5731.603 kb on + strand, within PfGW456L13_5134 at 5731.603 kb on + strand, within PfGW456L13_5134 at 5731.603 kb on + strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.604 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5731.703 kb on - strand, within PfGW456L13_5134 at 5732.214 kb on + strand, within PfGW456L13_5134 at 5732.215 kb on - strand at 5732.215 kb on - strand at 5732.215 kb on - strand at 5732.241 kb on - strand at 5732.287 kb on + strand at 5732.294 kb on + strand at 5732.325 kb on + strand at 5732.325 kb on + strand at 5732.326 kb on - strand at 5732.326 kb on - strand at 5732.326 kb on - strand at 5732.326 kb on - strand at 5732.422 kb on - strand at 5732.422 kb on - strand at 5732.422 kb on - strand at 5732.422 kb on - strand at 5732.717 kb on + strand, within PfGW456L13_5135 at 5733.067 kb on - strand, within PfGW456L13_5135 at 5733.114 kb on + strand, within PfGW456L13_5135 at 5733.114 kb on + strand, within PfGW456L13_5135 at 5733.114 kb on + strand, within PfGW456L13_5135 at 5733.114 kb on + strand, within PfGW456L13_5135 at 5733.115 kb on - strand, within PfGW456L13_5135 at 5733.115 kb on - strand, within PfGW456L13_5135 at 5733.144 kb on + strand, within PfGW456L13_5135 at 5733.144 kb on + strand, within PfGW456L13_5135 at 5733.144 kb on + strand, within PfGW456L13_5135 at 5733.145 kb on - strand, within PfGW456L13_5135 at 5733.630 kb on + strand at 5733.630 kb on + strand at 5733.630 kb on + strand at 5733.630 kb on + strand at 5733.630 kb on + strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.631 kb on - strand at 5733.670 kb on - strand at 5733.766 kb on + strand at 5733.786 kb on + strand at 5733.786 kb on + strand at 5733.938 kb on + strand at 5733.938 kb on + strand at 5733.938 kb on + strand at 5733.939 kb on - strand at 5734.134 kb on - strand, within PfGW456L13_5136 at 5734.628 kb on + strand, within PfGW456L13_5136
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 5,731,432 - -0.3 5,731,603 + PfGW456L13_5134 0.19 -0.3 5,731,603 + PfGW456L13_5134 0.19 -0.4 5,731,603 + PfGW456L13_5134 0.19 -0.1 5,731,603 + PfGW456L13_5134 0.19 -0.3 5,731,603 + PfGW456L13_5134 0.19 +0.3 5,731,604 - PfGW456L13_5134 0.19 +0.0 5,731,604 - PfGW456L13_5134 0.19 -0.6 5,731,604 - PfGW456L13_5134 0.19 +0.4 5,731,604 - PfGW456L13_5134 0.19 -1.3 5,731,604 - PfGW456L13_5134 0.19 -0.5 5,731,604 - PfGW456L13_5134 0.19 -0.4 5,731,703 - PfGW456L13_5134 0.31 -0.2 5,731,703 - PfGW456L13_5134 0.31 +0.8 5,731,703 - PfGW456L13_5134 0.31 +0.2 5,731,703 - PfGW456L13_5134 0.31 -0.1 5,731,703 - PfGW456L13_5134 0.31 +0.0 5,731,703 - PfGW456L13_5134 0.31 +0.3 5,732,214 + PfGW456L13_5134 0.90 +0.9 5,732,215 - -0.2 5,732,215 - +0.3 5,732,215 - +0.4 5,732,241 - +0.2 5,732,287 + -0.1 5,732,294 + +0.6 5,732,325 + +0.4 5,732,325 + +2.3 5,732,326 - -0.7 5,732,326 - -1.3 5,732,326 - -0.8 5,732,326 - -0.5 5,732,422 - -0.1 5,732,422 - +0.2 5,732,422 - -0.6 5,732,422 - -0.4 5,732,717 + PfGW456L13_5135 0.30 +0.5 5,733,067 - PfGW456L13_5135 0.56 -0.1 5,733,114 + PfGW456L13_5135 0.59 -0.1 5,733,114 + PfGW456L13_5135 0.59 +1.8 5,733,114 + PfGW456L13_5135 0.59 -0.6 5,733,114 + PfGW456L13_5135 0.59 +0.0 5,733,115 - PfGW456L13_5135 0.59 -0.2 5,733,115 - PfGW456L13_5135 0.59 -0.3 5,733,144 + PfGW456L13_5135 0.61 +0.6 5,733,144 + PfGW456L13_5135 0.61 -0.4 5,733,144 + PfGW456L13_5135 0.61 -0.9 5,733,145 - PfGW456L13_5135 0.61 +1.5 5,733,630 + +1.0 5,733,630 + +0.1 5,733,630 + +0.0 5,733,630 + -0.7 5,733,630 + -0.0 5,733,631 - -1.7 5,733,631 - -0.2 5,733,631 - +0.4 5,733,631 - +0.0 5,733,631 - -0.5 5,733,631 - +0.8 5,733,631 - -0.3 5,733,670 - -0.4 5,733,766 + +1.5 5,733,786 + +0.4 5,733,786 + +0.6 5,733,938 + +0.6 5,733,938 + -0.7 5,733,938 + +0.6 5,733,939 - -0.9 5,734,134 - PfGW456L13_5136 0.20 -1.0 5,734,628 + PfGW456L13_5136 0.54 +0.3
Or see this region's nucleotide sequence