Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4917 and PfGW456L13_4918 are separated by 323 nucleotides PfGW456L13_4918 and PfGW456L13_4919 are separated by 235 nucleotides
PfGW456L13_4917 - Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-), at 5,493,383 to 5,494,903
_4917
PfGW456L13_4918 - FIG00959654: hypothetical protein, at 5,495,227 to 5,495,931
_4918
PfGW456L13_4919 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 5,496,167 to 5,497,597
_4919
Position (kb)
5495
5496 Strain fitness (log2 ratio)
-1
0
1
2 at 5494.386 kb on + strand at 5494.387 kb on - strand, within PfGW456L13_4917 at 5494.885 kb on + strand at 5494.886 kb on - strand at 5494.886 kb on - strand at 5495.092 kb on + strand at 5495.154 kb on + strand at 5495.154 kb on + strand at 5495.154 kb on + strand at 5495.154 kb on + strand at 5495.155 kb on - strand at 5495.155 kb on - strand at 5495.155 kb on - strand at 5495.155 kb on - strand at 5495.155 kb on - strand at 5495.159 kb on + strand at 5495.159 kb on + strand at 5495.160 kb on - strand at 5495.160 kb on - strand at 5495.196 kb on + strand at 5495.214 kb on + strand at 5495.215 kb on - strand at 5495.215 kb on - strand at 5495.241 kb on + strand at 5495.255 kb on + strand at 5495.256 kb on - strand at 5495.433 kb on + strand, within PfGW456L13_4918 at 5495.433 kb on + strand, within PfGW456L13_4918 at 5495.440 kb on + strand, within PfGW456L13_4918 at 5495.441 kb on - strand, within PfGW456L13_4918 at 5495.441 kb on - strand, within PfGW456L13_4918 at 5495.582 kb on - strand, within PfGW456L13_4918 at 5495.681 kb on + strand, within PfGW456L13_4918 at 5495.682 kb on - strand, within PfGW456L13_4918 at 5495.682 kb on - strand, within PfGW456L13_4918 at 5495.912 kb on - strand at 5495.930 kb on - strand at 5495.932 kb on + strand at 5495.932 kb on + strand at 5495.932 kb on + strand at 5495.933 kb on - strand at 5495.933 kb on - strand at 5495.933 kb on - strand at 5495.933 kb on - strand at 5496.045 kb on - strand at 5496.080 kb on - strand at 5496.185 kb on + strand at 5496.186 kb on - strand at 5496.206 kb on + strand at 5496.207 kb on - strand at 5496.207 kb on - strand at 5496.207 kb on - strand at 5496.332 kb on + strand, within PfGW456L13_4919 at 5496.332 kb on + strand, within PfGW456L13_4919 at 5496.333 kb on - strand, within PfGW456L13_4919 at 5496.333 kb on - strand, within PfGW456L13_4919 at 5496.333 kb on - strand at 5496.368 kb on + strand, within PfGW456L13_4919 at 5496.368 kb on + strand, within PfGW456L13_4919 at 5496.368 kb on + strand, within PfGW456L13_4919 at 5496.369 kb on - strand, within PfGW456L13_4919 at 5496.440 kb on + strand, within PfGW456L13_4919 at 5496.440 kb on + strand, within PfGW456L13_4919 at 5496.440 kb on + strand, within PfGW456L13_4919 at 5496.585 kb on - strand, within PfGW456L13_4919 at 5496.791 kb on + strand, within PfGW456L13_4919 at 5496.791 kb on + strand, within PfGW456L13_4919 at 5496.791 kb on + strand, within PfGW456L13_4919 at 5496.791 kb on + strand, within PfGW456L13_4919 at 5496.791 kb on + strand, within PfGW456L13_4919 at 5496.792 kb on - strand, within PfGW456L13_4919 at 5496.792 kb on - strand, within PfGW456L13_4919 at 5496.792 kb on - strand, within PfGW456L13_4919
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 5,494,386 + -0.6 5,494,387 - PfGW456L13_4917 0.66 -0.8 5,494,885 + -0.7 5,494,886 - +0.6 5,494,886 - -0.4 5,495,092 + -0.7 5,495,154 + +0.6 5,495,154 + +0.4 5,495,154 + -0.1 5,495,154 + +0.1 5,495,155 - +0.1 5,495,155 - -0.4 5,495,155 - +0.3 5,495,155 - +2.0 5,495,155 - -0.7 5,495,159 + -0.3 5,495,159 + -0.0 5,495,160 - +0.6 5,495,160 - +0.8 5,495,196 + -0.1 5,495,214 + -0.3 5,495,215 - +0.3 5,495,215 - +1.0 5,495,241 + -0.4 5,495,255 + -0.9 5,495,256 - -0.5 5,495,433 + PfGW456L13_4918 0.29 +1.5 5,495,433 + PfGW456L13_4918 0.29 +0.1 5,495,440 + PfGW456L13_4918 0.30 +0.2 5,495,441 - PfGW456L13_4918 0.30 +0.6 5,495,441 - PfGW456L13_4918 0.30 -0.5 5,495,582 - PfGW456L13_4918 0.50 +0.3 5,495,681 + PfGW456L13_4918 0.64 -0.1 5,495,682 - PfGW456L13_4918 0.65 +0.4 5,495,682 - PfGW456L13_4918 0.65 +0.0 5,495,912 - -0.3 5,495,930 - -0.2 5,495,932 + -1.6 5,495,932 + -0.4 5,495,932 + -0.1 5,495,933 - +0.1 5,495,933 - -1.2 5,495,933 - +0.3 5,495,933 - +0.8 5,496,045 - +0.5 5,496,080 - +1.3 5,496,185 + -0.7 5,496,186 - -1.0 5,496,206 + -0.7 5,496,207 - -0.2 5,496,207 - -0.6 5,496,207 - +0.3 5,496,332 + PfGW456L13_4919 0.12 +0.5 5,496,332 + PfGW456L13_4919 0.12 -0.1 5,496,333 - PfGW456L13_4919 0.12 -0.4 5,496,333 - PfGW456L13_4919 0.12 -0.9 5,496,333 - +2.3 5,496,368 + PfGW456L13_4919 0.14 +0.3 5,496,368 + PfGW456L13_4919 0.14 -0.6 5,496,368 + PfGW456L13_4919 0.14 +0.7 5,496,369 - PfGW456L13_4919 0.14 +0.5 5,496,440 + PfGW456L13_4919 0.19 +1.1 5,496,440 + PfGW456L13_4919 0.19 +0.1 5,496,440 + PfGW456L13_4919 0.19 +1.4 5,496,585 - PfGW456L13_4919 0.29 -0.3 5,496,791 + PfGW456L13_4919 0.44 +1.0 5,496,791 + PfGW456L13_4919 0.44 +0.3 5,496,791 + PfGW456L13_4919 0.44 -0.7 5,496,791 + PfGW456L13_4919 0.44 -0.2 5,496,791 + PfGW456L13_4919 0.44 -0.7 5,496,792 - PfGW456L13_4919 0.44 +0.5 5,496,792 - PfGW456L13_4919 0.44 -0.2 5,496,792 - PfGW456L13_4919 0.44 +0.7
Or see this region's nucleotide sequence