Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4882 and PfGW456L13_4883 overlap by 4 nucleotides PfGW456L13_4883 and PfGW456L13_5240 are separated by 107 nucleotides PfGW456L13_5240 and PfGW456L13_4884 are separated by 161 nucleotides
PfGW456L13_4882 - tRNA-guanine transglycosylase (EC 2.4.2.29), at 5,446,158 to 5,447,291
_4882
PfGW456L13_4883 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-), at 5,447,288 to 5,448,352
_4883
PfGW456L13_5240 - tRNA-Leu-CAA, at 5,448,460 to 5,448,541
_5240
PfGW456L13_4884 - hypothetical protein, at 5,448,703 to 5,449,032
_4884
Position (kb) 5447
5448
5449 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5446.290 kb on - strand, within PfGW456L13_4882 at 5446.290 kb on - strand, within PfGW456L13_4882 at 5446.365 kb on - strand, within PfGW456L13_4882 at 5446.367 kb on - strand, within PfGW456L13_4882 at 5446.367 kb on - strand, within PfGW456L13_4882 at 5446.550 kb on + strand, within PfGW456L13_4882 at 5446.592 kb on - strand, within PfGW456L13_4882 at 5447.170 kb on + strand, within PfGW456L13_4882 at 5447.171 kb on - strand, within PfGW456L13_4882 at 5447.171 kb on - strand, within PfGW456L13_4882 at 5447.273 kb on + strand at 5447.274 kb on - strand at 5447.274 kb on - strand at 5447.274 kb on - strand at 5447.291 kb on + strand at 5447.291 kb on + strand at 5447.292 kb on - strand at 5447.339 kb on - strand at 5447.339 kb on - strand at 5447.339 kb on - strand at 5447.521 kb on - strand, within PfGW456L13_4883 at 5447.906 kb on + strand, within PfGW456L13_4883 at 5447.906 kb on + strand, within PfGW456L13_4883 at 5447.906 kb on + strand, within PfGW456L13_4883 at 5447.907 kb on - strand, within PfGW456L13_4883 at 5447.908 kb on + strand, within PfGW456L13_4883 at 5447.908 kb on + strand, within PfGW456L13_4883 at 5447.908 kb on + strand, within PfGW456L13_4883 at 5447.909 kb on - strand, within PfGW456L13_4883 at 5447.909 kb on - strand, within PfGW456L13_4883 at 5447.910 kb on + strand, within PfGW456L13_4883 at 5447.910 kb on + strand, within PfGW456L13_4883 at 5447.910 kb on + strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5447.911 kb on - strand, within PfGW456L13_4883 at 5448.278 kb on - strand at 5448.278 kb on - strand at 5448.334 kb on + strand at 5448.411 kb on + strand at 5448.412 kb on - strand at 5448.751 kb on + strand, within PfGW456L13_4884 at 5448.752 kb on - strand, within PfGW456L13_4884 at 5448.857 kb on + strand, within PfGW456L13_4884 at 5448.858 kb on - strand, within PfGW456L13_4884 at 5449.016 kb on + strand at 5449.152 kb on - strand at 5449.158 kb on + strand at 5449.158 kb on + strand at 5449.159 kb on - strand at 5449.162 kb on - strand at 5449.216 kb on + strand at 5449.217 kb on - strand at 5449.217 kb on - strand at 5449.217 kb on - strand at 5449.221 kb on - strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.242 kb on + strand at 5449.243 kb on - strand at 5449.243 kb on - strand at 5449.243 kb on - strand at 5449.243 kb on - strand at 5449.243 kb on - strand at 5449.243 kb on - strand at 5449.248 kb on + strand at 5449.248 kb on + strand at 5449.248 kb on + strand at 5449.248 kb on + strand at 5449.249 kb on - strand at 5449.249 kb on - strand at 5449.249 kb on - strand at 5449.251 kb on - strand at 5449.274 kb on + strand at 5449.317 kb on + strand at 5449.318 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 5,446,290 - PfGW456L13_4882 0.12 +0.6 5,446,290 - PfGW456L13_4882 0.12 +1.4 5,446,365 - PfGW456L13_4882 0.18 -0.2 5,446,367 - PfGW456L13_4882 0.18 -0.6 5,446,367 - PfGW456L13_4882 0.18 -1.3 5,446,550 + PfGW456L13_4882 0.35 +1.0 5,446,592 - PfGW456L13_4882 0.38 -1.1 5,447,170 + PfGW456L13_4882 0.89 -1.0 5,447,171 - PfGW456L13_4882 0.89 +0.6 5,447,171 - PfGW456L13_4882 0.89 -0.6 5,447,273 + +2.2 5,447,274 - +0.3 5,447,274 - -0.3 5,447,274 - +0.9 5,447,291 + +0.3 5,447,291 + -2.3 5,447,292 - +1.8 5,447,339 - -0.0 5,447,339 - +0.5 5,447,339 - +0.8 5,447,521 - PfGW456L13_4883 0.22 +0.6 5,447,906 + PfGW456L13_4883 0.58 +2.0 5,447,906 + PfGW456L13_4883 0.58 -0.8 5,447,906 + PfGW456L13_4883 0.58 -0.5 5,447,907 - PfGW456L13_4883 0.58 -1.5 5,447,908 + PfGW456L13_4883 0.58 +1.6 5,447,908 + PfGW456L13_4883 0.58 +0.4 5,447,908 + PfGW456L13_4883 0.58 +2.2 5,447,909 - PfGW456L13_4883 0.58 +1.9 5,447,909 - PfGW456L13_4883 0.58 +0.8 5,447,910 + PfGW456L13_4883 0.58 +0.6 5,447,910 + PfGW456L13_4883 0.58 +0.2 5,447,910 + PfGW456L13_4883 0.58 +1.6 5,447,911 - PfGW456L13_4883 0.58 -1.3 5,447,911 - PfGW456L13_4883 0.58 +1.0 5,447,911 - PfGW456L13_4883 0.58 -1.2 5,447,911 - PfGW456L13_4883 0.58 +1.0 5,447,911 - PfGW456L13_4883 0.58 +0.8 5,447,911 - PfGW456L13_4883 0.58 +0.6 5,447,911 - PfGW456L13_4883 0.58 +1.5 5,448,278 - -1.3 5,448,278 - +0.8 5,448,334 + +1.6 5,448,411 + -0.7 5,448,412 - -2.6 5,448,751 + PfGW456L13_4884 0.15 -0.2 5,448,752 - PfGW456L13_4884 0.15 -0.6 5,448,857 + PfGW456L13_4884 0.47 -0.2 5,448,858 - PfGW456L13_4884 0.47 +0.7 5,449,016 + -0.2 5,449,152 - -0.9 5,449,158 + +0.6 5,449,158 + -0.0 5,449,159 - -1.0 5,449,162 - -0.1 5,449,216 + -0.3 5,449,217 - -1.1 5,449,217 - -1.3 5,449,217 - +0.3 5,449,221 - -1.0 5,449,242 + -0.2 5,449,242 + -1.2 5,449,242 + -0.8 5,449,242 + -0.1 5,449,242 + -1.4 5,449,242 + +0.5 5,449,242 + -1.2 5,449,242 + +0.2 5,449,242 + -0.8 5,449,242 + +0.3 5,449,242 + -0.8 5,449,242 + -1.2 5,449,242 + -0.6 5,449,243 - -1.4 5,449,243 - -1.7 5,449,243 - +0.4 5,449,243 - -0.3 5,449,243 - -1.1 5,449,243 - -0.2 5,449,248 + -0.4 5,449,248 + -0.8 5,449,248 + +0.6 5,449,248 + -0.2 5,449,249 - +0.0 5,449,249 - -0.8 5,449,249 - +1.2 5,449,251 - +0.4 5,449,274 + -0.1 5,449,317 + +0.1 5,449,318 - -0.3
Or see this region's nucleotide sequence