Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4107 and PfGW456L13_4108 are separated by 2 nucleotides PfGW456L13_4108 and PfGW456L13_4109 are separated by 62 nucleotides PfGW456L13_4109 and PfGW456L13_4110 are separated by 26 nucleotides PfGW456L13_4110 and PfGW456L13_4111 are separated by 120 nucleotides
PfGW456L13_4107 - CmpX, at 4,619,749 to 4,620,573
_4107
PfGW456L13_4108 - CrfX protein, at 4,620,576 to 4,620,824
_4108
PfGW456L13_4109 - Magnesium and cobalt transport protein CorA, at 4,620,887 to 4,621,882
_4109
PfGW456L13_4110 - Ribonuclease E inhibitor RraA, at 4,621,909 to 4,622,400
_4110
PfGW456L13_4111 - Esterase/lipase/thioesterase family protein, at 4,622,521 to 4,623,510
_4111
Position (kb)
4620
4621
4622 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4619.913 kb on - strand, within PfGW456L13_4107 at 4619.913 kb on - strand, within PfGW456L13_4107 at 4620.110 kb on + strand, within PfGW456L13_4107 at 4620.111 kb on - strand, within PfGW456L13_4107 at 4620.111 kb on - strand, within PfGW456L13_4107 at 4620.111 kb on - strand, within PfGW456L13_4107 at 4620.111 kb on - strand, within PfGW456L13_4107 at 4620.111 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.219 kb on - strand, within PfGW456L13_4107 at 4620.337 kb on - strand, within PfGW456L13_4107 at 4620.337 kb on - strand, within PfGW456L13_4107 at 4620.573 kb on + strand at 4620.574 kb on - strand at 4620.588 kb on - strand at 4620.605 kb on + strand, within PfGW456L13_4108 at 4620.606 kb on - strand, within PfGW456L13_4108 at 4620.611 kb on + strand, within PfGW456L13_4108 at 4620.612 kb on - strand, within PfGW456L13_4108 at 4620.824 kb on + strand at 4621.068 kb on + strand, within PfGW456L13_4109 at 4621.068 kb on + strand, within PfGW456L13_4109 at 4621.069 kb on - strand, within PfGW456L13_4109 at 4621.069 kb on - strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.330 kb on + strand, within PfGW456L13_4109 at 4621.331 kb on - strand, within PfGW456L13_4109 at 4621.333 kb on - strand, within PfGW456L13_4109 at 4621.419 kb on + strand, within PfGW456L13_4109 at 4621.419 kb on + strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.420 kb on - strand, within PfGW456L13_4109 at 4621.613 kb on + strand, within PfGW456L13_4109 at 4621.614 kb on - strand, within PfGW456L13_4109 at 4621.910 kb on + strand at 4621.910 kb on + strand at 4621.910 kb on + strand at 4621.911 kb on - strand at 4621.911 kb on - strand at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.964 kb on + strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.965 kb on - strand, within PfGW456L13_4110 at 4621.971 kb on - strand, within PfGW456L13_4110 at 4621.971 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.121 kb on - strand, within PfGW456L13_4110 at 4622.210 kb on - strand, within PfGW456L13_4110 at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.390 kb on + strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.391 kb on - strand at 4622.414 kb on + strand at 4622.414 kb on + strand at 4622.415 kb on - strand at 4622.469 kb on + strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.470 kb on - strand at 4622.849 kb on + strand, within PfGW456L13_4111
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 4,619,913 - PfGW456L13_4107 0.20 -3.2 4,619,913 - PfGW456L13_4107 0.20 -1.7 4,620,110 + PfGW456L13_4107 0.44 +1.1 4,620,111 - PfGW456L13_4107 0.44 -0.5 4,620,111 - PfGW456L13_4107 0.44 -1.4 4,620,111 - PfGW456L13_4107 0.44 -1.0 4,620,111 - PfGW456L13_4107 0.44 -2.0 4,620,111 - PfGW456L13_4107 0.44 -0.9 4,620,219 - PfGW456L13_4107 0.57 -0.6 4,620,219 - PfGW456L13_4107 0.57 +2.1 4,620,219 - PfGW456L13_4107 0.57 -1.5 4,620,219 - PfGW456L13_4107 0.57 +0.4 4,620,219 - PfGW456L13_4107 0.57 -0.3 4,620,219 - PfGW456L13_4107 0.57 -1.4 4,620,337 - PfGW456L13_4107 0.71 -0.5 4,620,337 - PfGW456L13_4107 0.71 -0.5 4,620,573 + -0.5 4,620,574 - +0.6 4,620,588 - +0.1 4,620,605 + PfGW456L13_4108 0.12 +0.1 4,620,606 - PfGW456L13_4108 0.12 -0.5 4,620,611 + PfGW456L13_4108 0.14 -1.3 4,620,612 - PfGW456L13_4108 0.14 -0.2 4,620,824 + -0.6 4,621,068 + PfGW456L13_4109 0.18 +0.7 4,621,068 + PfGW456L13_4109 0.18 +0.6 4,621,069 - PfGW456L13_4109 0.18 -0.6 4,621,069 - PfGW456L13_4109 0.18 +0.7 4,621,330 + PfGW456L13_4109 0.44 +1.2 4,621,330 + PfGW456L13_4109 0.44 +0.1 4,621,330 + PfGW456L13_4109 0.44 -1.9 4,621,331 - PfGW456L13_4109 0.45 +0.5 4,621,333 - PfGW456L13_4109 0.45 +0.2 4,621,419 + PfGW456L13_4109 0.53 +2.5 4,621,419 + PfGW456L13_4109 0.53 +0.2 4,621,420 - PfGW456L13_4109 0.54 +0.5 4,621,420 - PfGW456L13_4109 0.54 -0.8 4,621,420 - PfGW456L13_4109 0.54 -0.9 4,621,420 - PfGW456L13_4109 0.54 +0.8 4,621,613 + PfGW456L13_4109 0.73 +1.7 4,621,614 - PfGW456L13_4109 0.73 +0.6 4,621,910 + -0.4 4,621,910 + -0.0 4,621,910 + +0.9 4,621,911 - +1.3 4,621,911 - -0.1 4,621,964 + PfGW456L13_4110 0.11 +0.3 4,621,964 + PfGW456L13_4110 0.11 +0.5 4,621,964 + PfGW456L13_4110 0.11 -0.5 4,621,965 - PfGW456L13_4110 0.11 -1.6 4,621,965 - PfGW456L13_4110 0.11 -0.6 4,621,965 - PfGW456L13_4110 0.11 +0.4 4,621,971 - PfGW456L13_4110 0.13 +0.1 4,621,971 - PfGW456L13_4110 0.13 -0.1 4,622,121 - PfGW456L13_4110 0.43 +1.0 4,622,121 - PfGW456L13_4110 0.43 +0.4 4,622,121 - PfGW456L13_4110 0.43 +0.2 4,622,121 - PfGW456L13_4110 0.43 +0.3 4,622,121 - PfGW456L13_4110 0.43 +0.8 4,622,121 - PfGW456L13_4110 0.43 -0.2 4,622,210 - PfGW456L13_4110 0.61 -1.3 4,622,390 + +0.2 4,622,390 + -0.3 4,622,390 + -0.3 4,622,390 + -0.2 4,622,391 - +1.2 4,622,391 - -0.3 4,622,391 - -0.5 4,622,391 - +0.7 4,622,391 - -0.2 4,622,391 - +1.5 4,622,391 - +0.2 4,622,391 - +1.6 4,622,391 - -0.0 4,622,414 + -0.5 4,622,414 + +0.0 4,622,415 - -0.3 4,622,469 + +1.3 4,622,470 - +0.9 4,622,470 - -0.3 4,622,470 - -0.4 4,622,470 - +0.2 4,622,470 - -0.6 4,622,849 + PfGW456L13_4111 0.33 +2.1
Or see this region's nucleotide sequence